Perdeuterated GbpA Enables Neutron Scattering Experiments of a Lytic Polysaccharide Monooxygenase.
H V SørensenMateu Montserrat-CanalsJennifer S M LooseS Zoë FisherMartine MoulinMatthew P BlakeleyGabriele CordaraKaare Bjerregaard-AndersenUte KrengelPublished in: ACS omega (2023)
Lytic polysaccharide monooxygenases (LPMOs) are surface-active redox enzymes that catalyze the degradation of recalcitrant polysaccharides, making them important tools for energy production from renewable sources. In addition, LPMOs are important virulence factors for fungi, bacteria, and viruses. However, many knowledge gaps still exist regarding their catalytic mechanism and interaction with their insoluble, crystalline substrates. Moreover, conventional structural biology techniques, such as X-ray crystallography, usually do not reveal the protonation state of catalytically important residues. In contrast, neutron crystallography is highly suited to obtain this information, albeit with significant sample volume requirements and challenges associated with hydrogen's large incoherent scattering signal. We set out to demonstrate the feasibility of neutron-based techniques for LPMOs using N -acetylglucosamine-binding protein A (GbpA) from Vibrio cholerae as a target. GbpA is a multifunctional protein that is secreted by the bacteria to colonize and degrade chitin. We developed an efficient deuteration protocol, which yields >10 mg of pure 97% deuterated protein per liter expression media, which was scaled up further at international facilities. The deuterated protein retains its catalytic activity and structure, as demonstrated by small-angle X-ray and neutron scattering studies of full-length GbpA and X-ray crystal structures of its LPMO domain (to 1.1 Å resolution), setting the stage for neutron scattering experiments with its substrate chitin.
Keyphrases
- binding protein
- high resolution
- protein protein
- dual energy
- amino acid
- healthcare
- randomized controlled trial
- water soluble
- escherichia coli
- poor prognosis
- pseudomonas aeruginosa
- magnetic resonance
- staphylococcus aureus
- drug delivery
- electron microscopy
- antimicrobial resistance
- drinking water
- magnetic resonance imaging
- monte carlo
- biofilm formation
- room temperature
- ionic liquid
- single molecule