In Vivo Epigenetic CRISPR Screen Identifies Asf1a as an Immunotherapeutic Target in Kras-Mutant Lung Adenocarcinoma.
Fei LiQingyuan HuangTroy A LusterHai HuHua ZhangBilly Wai-Lung NgAlireza Khodadadi-JamayranWei WangTing ChenJiehui DengMichela RanieriZhaoyuan FangVal PyonCatríona M DowlingEce BagdatliogluChristina AlmonteKristen LabbeHeather SilverAlexandra R RabinKandarp JaniAristotelis TsirigosThales PapagiannakopoulosPeter S HammermanVamsidhar VelchetiGordon J FreemanJun QiGeorge MillerKwok-Kin WongPublished in: Cancer discovery (2019)
Despite substantial progress in lung cancer immunotherapy, the overall response rate in patients with KRAS-mutant lung adenocarcinoma (LUAD) remains low. Combining standard immunotherapy with adjuvant approaches that enhance adaptive immune responses-such as epigenetic modulation of antitumor immunity-is therefore an attractive strategy. To identify epigenetic regulators of tumor immunity, we constructed an epigenetic-focused single guide RNA library and performed an in vivo CRISPR screen in a Kras G12D/Trp53 -/- LUAD model. Our data showed that loss of the histone chaperone Asf1a in tumor cells sensitizes tumors to anti-PD-1 treatment. Mechanistic studies revealed that tumor cell-intrinsic Asf1a deficiency induced immunogenic macrophage differentiation in the tumor microenvironment by upregulating GM-CSF expression and potentiated T-cell activation in combination with anti-PD-1. Our results provide a rationale for a novel combination therapy consisting of ASF1A inhibition and anti-PD-1 immunotherapy. SIGNIFICANCE: Using an in vivo epigenetic CRISPR screen, we identified Asf1a as a critical regulator of LUAD sensitivity to anti-PD-1 therapy. Asf1a deficiency synergized with anti-PD-1 immunotherapy by promoting M1-like macrophage polarization and T-cell activation. Thus, we provide a new immunotherapeutic strategy for this subtype of patients with LUAD.See related commentary by Menzel and Black, p. 179.This article is highlighted in the In This Issue feature, p. 161.
Keyphrases
- dna methylation
- genome wide
- combination therapy
- gene expression
- wild type
- crispr cas
- genome editing
- immune response
- high throughput
- early stage
- poor prognosis
- transcription factor
- clinical trial
- replacement therapy
- big data
- stem cells
- adipose tissue
- cell therapy
- wastewater treatment
- electronic health record
- deep learning
- endothelial cells
- high glucose
- heat shock
- bone marrow
- oxidative stress
- heat stress