Journal of open source software

Keyphrases

Publications

volume 9, number 100, 2024

Anthony Galassi, Martin Norgaard, Adam G Thomas, Gabriel Gonzalez-Escamilla, Claus Svarer, Chris Rorden, Granville J Matheson, Gitte M Knudsen, Robert B Innis, Melanie Ganz, Cyrus Eierud, Murat Bilgel, Cyril Pernet
PET2BIDS: a library for converting Positron Emission Tomography data to BIDS. Journal of open source software 9 (100) (2024)

volume 9, number 97, 2024

volume 8, number 82, 2023

David McCoy, Alan E Hubbard, Mark J van der Laan
CVtreeMLE: Efficient Estimation of Mixed Exposures using Data Adaptive Decision Trees and Cross-Validated Targeted Maximum Likelihood Estimation in R. Journal of open source software 8 (82) (2023)

volume 8, number 83, 2023

Aashish N Patel, Andrew R Sedler, Jingya Huang, Chethan Pandarinath, Vikash Gilja
High-performance neural population dynamics modeling enabled by scalable computational infrastructure. Journal of open source software 8 (83) (2023)

volume 8, number 85, 2023

volume 8, number 88, 2023

Yoli Meydan, Federico Baldini, Tal Korem
pymgpipe: microbiome metabolic modeling in Python. Journal of open source software 8 (88) (2023)

volume 8, number 91, 2023

volume 8, number 92, 2023

Mainak Jas, Ryan Thorpe, Nicholas M Tolley, Christopher Bailey, Steven Brandt, Blake Caldwell, Huzi Cheng, Dylan Daniels, Carolina Fernandez Pujol, Mostafa Khalil, Samika Kanekar, Carmen Kohl, Orsolya B Kolozsvári, Kaisu Lankinen, Kenneth Loi, Samuel A Neymotin, Rajat Partani, Mattan Pelah, Alexander P Rockhill, Mohamed Sherif, Matti S Hämäläinen, Stephanie R Jones
HNN-core: A Python software for cellular and circuit-level interpretation of human MEG/EEG. Journal of open source software 8 (92) (2023)
Mainak Jas, Ryan Thorpe, Nicholas M Tolley, Christopher Bailey, Steven Brandt, Blake Caldwell, Huzi Cheng, Dylan Daniels, Carolina Fernandez Pujol, Mostafa Khalil, Samika Kanekar, Carmen Kohl, Orsolya B Kolozsvári, Kaisu Lankinen, Kenneth Loi, Samuel A Neymotin, Rajat Partani, Mattan Pelah, Alexander P Rockhill, Mohamed Sherif, Matti S Hämäläinen, Stephanie R Jones
HNN-core: A Python software for cellular and circuit-level interpretation of human MEG/EEG. Journal of open source software 8 (92) (2023)
Mainak Jas, Ryan Thorpe, Nicholas M Tolley, Christopher Bailey, Steven Brandt, Blake Caldwell, Huzi Cheng, Dylan Daniels, Carolina Fernandez Pujol, Mostafa Khalil, Samika Kanekar, Carmen Kohl, Orsolya B Kolozsvári, Kaisu Lankinen, Kenneth Loi, Samuel A Neymotin, Rajat Partani, Mattan Pelah, Alexander P Rockhill, Mohamed Sherif, Matti S Hämäläinen, Stephanie R Jones
HNN-core: A Python software for cellular and circuit-level interpretation of human MEG/EEG. Journal of open source software 8 (92) (2023)

volume 7, number 69, 2022

Pascal T Merz, Wei-Tse Hsu, Matt W Thompson, Simon Boothroyd, Chris C Walker, Michael R Shirts
physical_validation: A Python package to assess the physical validity of molecular simulation results. Journal of open source software 7 (69) (2022)

volume 7, number 70, 2022

Alexander P Rockhill, Eric Larson, Brittany Stedelin, Alessandra Mantovani, Ahmed M Raslan, Alexandre Gramfort, Nicole C Swann
Intracranial Electrode Location and Analysis in MNE-Python. Journal of open source software 7 (70) (2022)

volume 6, number 57, 2021

John Huddleston, James Hadfield, Thomas R Sibley, Jover Lee, Kairsten Fay, Misja Ilcisin, Elias Harkins, Trevor Bedford, Richard A Neher, Emma B Hodcroft
Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens. Journal of open source software 6 (57) (2021)