Biodesign research

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Publications

volume 6, 2024

Kun Liu, Zhen Tong, Xuanqi Zhang, Meryem Dahmani, Ming Zhao, Mengkai Hu, Xiangfei Li, Zhenglian Xue
A Review: Development of a Synthetic Lactoferrin Biological System. Biodesign research 6 (2024)
Doreen Meier, Christian Rauch, Marcel Wagner, Paul Klemm, Patrick Blumenkamp, Raphael Müller, Eric Ellenberger, Kinnari M Karia, Stefano Vecchione, Javier Serrania, Marcus Lechner, Georg Fritz, Alexander Goesmann, Anke Becker
A MoClo-Compatible Toolbox of ECF Sigma Factor-Based Regulatory Switches for Proteobacterial Chassis. Biodesign research 6 (2024)
Shivang Hina-Nilesh Joshi, Christopher Jenkins, David Ulaeto, Thomas E Gorochowski
Accelerating Genetic Sensor Development, Scale-up, and Deployment Using Synthetic Biology. Biodesign research 6 (2024)
Shi-Jian Song, Hai-Ping Diao, Yong-Feng Guo, Inhwan Hwang
Advances in Subcellular Accumulation Design for Recombinant Protein Production in Tobacco. Biodesign research 6 (2024)
Wakana Yamashita, Shinjiro Ojima, Azumi Tamura, Aa Haeruman Azam, Kohei Kondo, Zhang Yuancheng, Longzhu Cui, Masaki Shintani, Masato Suzuki, Yoshimasa Takahashi, Koichi Watashi, Satoshi Tsuneda, Kotaro Kiga
Harnessing a T1 Phage-Derived Spanin for Developing Phage-Based Antimicrobial Development. Biodesign research 6 (2024)
Jian Fan, Yang Zhang, Wenhao Li, Zhizhen Li, Danli Zhang, Qiwen Mo, Mingfeng Cao, Jifeng Yuan
Multidimensional Optimization of Saccharomyces cerevisiae for Carotenoid Overproduction. Biodesign research 6 (2024)
Ning Jiang, Wanqing Ding, Xiaojuan Zhu, Jianshu Chen, Lin Yang, Xiaoping Yi, Yingping Zhuang, Jiangchao Qian, Jiaofang Huang
Lipid-Encapsulated Engineered Bacterial Living Materials Inhibit Cyclooxygenase II to Enhance Doxorubicin Toxicity. Biodesign research 6 (2024)
Wankui Jiang, Zhixiao Lei, Haiyan Gao, Yujia Jiang, Carol Sze Ki Lin, Wenming Zhang, Min Jiang
Biodetoxification of Lignocellulose Hydrolysate for Direct Use in Succinic Acid Production. Biodesign research 6 (2024)
Junyi Wang, Jingya Song, Cong Fan, Jiahao Duan, Kaiyuan He, Jifeng Yuan
Copper-Induced In Vivo Gene Amplification in Budding Yeast. Biodesign research 6 (2024)
Yuanwei Gou, Xiaojing Jiang, Jiazhang Lian
Intricate Metabolic Network for Paclitaxel Biosynthesis. Biodesign research 6 (2024)
Peiling Wu, Ding Luo, Yuezhou Wang, Xiaoxu Shang, Binju Wang, Xianming Deng, Jifeng Yuan
Biosynthesis of Diverse Ephedra-Type Alkaloids via a Newly Identified Enzymatic Cascade. Biodesign research 6 (2024)
Md Torikul Islam, Yang Liu, Md Mahmudul Hassan, Paul E Abraham, Jean Merlet, Alice Townsend, Daniel Jacobson, C Robin Buell, Gerald A Tuskan, Xiaohan Yang
Advances in the Application of Single-Cell Transcriptomics in Plant Systems and Synthetic Biology. Biodesign research 6 (2024)
Filippo Liguori, Nicola Pellicciotta, Edoardo Milanetti, Sophia Xi Windemuth, Giancarlo Ruocco, Roberto Di Leonardo, Tal Danino
Dynamic Gene Expression Mitigates Mutational Escape in Lysis-Driven Bacteria Cancer Therapy. Biodesign research 6 (2024)
Wankui Jiang, Zhixiao Lei, Haiyan Gao, Yujia Jiang, Carol Sze Ki Lin, Wenming Zhang, Min Jiang
Biodetoxification of Lignocellulose Hydrolysate for Direct Use in Succinic Acid Production. Biodesign research 6 (2024)
Kun Liu, Zhen Tong, Xuanqi Zhang, Meryem Dahmani, Ming Zhao, Mengkai Hu, Xiangfei Li, Zhenglian Xue
A Review: Development of a Synthetic Lactoferrin Biological System. Biodesign research 6 (2024)
Shivang Hina-Nilesh Joshi, Christopher Jenkins, David Ulaeto, Thomas E Gorochowski
Accelerating Genetic Sensor Development, Scale-up, and Deployment Using Synthetic Biology. Biodesign research 6 (2024)
Ning Jiang, Wanqing Ding, Xiaojuan Zhu, Jianshu Chen, Lin Yang, Xiaoping Yi, Yingping Zhuang, Jiangchao Qian, Jiaofang Huang
Lipid-Encapsulated Engineered Bacterial Living Materials Inhibit Cyclooxygenase II to Enhance Doxorubicin Toxicity. Biodesign research 6 (2024)
Xinying Wang, Ruimin Gao, Xuan Wang, Juan Zhou, Xian-En Zhang, Feng Li
mRNA Delivery Systems Based on Protein Nanocages: How Far Can We Go? Biodesign research 6 (2024)
Peiling Wu, Ding Luo, Yuezhou Wang, Xiaoxu Shang, Binju Wang, Xianming Deng, Jifeng Yuan
Biosynthesis of Diverse Ephedra-Type Alkaloids via a Newly Identified Enzymatic Cascade. Biodesign research 6 (2024)
Junyi Wang, Jingya Song, Cong Fan, Jiahao Duan, Kaiyuan He, Jifeng Yuan
Copper-Induced In Vivo Gene Amplification in Budding Yeast. Biodesign research 6 (2024)
Xinying Wang, Ruimin Gao, Xuan Wang, Juan Zhou, Xian-En Zhang, Feng Li
mRNA Delivery Systems Based on Protein Nanocages: How Far Can We Go? Biodesign research 6 (2024)
Huanyu Chu, Zhenyang Tian, Lingling Hu, Hejian Zhang, Hong Chang, Jie Bai, Dingyu Liu, Lina Lu, Jian Cheng, Huifeng Jiang
High-Temperature Tolerance Protein Engineering through Deep Evolution. Biodesign research 6 (2024)
Xinyue Gui, Fei Li, Xinyu Cui, Ranran Wu, Dingyu Liu, Chunling Ma, Lijuan Ma, Huifeng Jiang, Chun You, Zhiguang Zhu
A Light-Driven In Vitro Enzymatic Biosystem for the Synthesis of α-Farnesene from Methanol. Biodesign research 6 (2024)
Doreen Meier, Christian Rauch, Marcel Wagner, Paul Klemm, Patrick Blumenkamp, Raphael Müller, Eric Ellenberger, Kinnari M Karia, Stefano Vecchione, Javier Serrania, Marcus Lechner, Georg Fritz, Alexander Goesmann, Anke Becker
A MoClo-Compatible Toolbox of ECF Sigma Factor-Based Regulatory Switches for Proteobacterial Chassis. Biodesign research 6 (2024)
Wakana Yamashita, Shinjiro Ojima, Azumi Tamura, Aa Haeruman Azam, Kohei Kondo, Zhang Yuancheng, Longzhu Cui, Masaki Shintani, Masato Suzuki, Yoshimasa Takahashi, Koichi Watashi, Satoshi Tsuneda, Kotaro Kiga
Harnessing a T1 Phage-Derived Spanin for Developing Phage-Based Antimicrobial Development. Biodesign research 6 (2024)
Guanglin Zhu, Xinzhi Zhou, Mingzhang Wen, Jianjun Qiao, Guo Li, Yuan Yao
CRISPR-Cas13: Pioneering RNA Editing for Nucleic Acid Therapeutics. Biodesign research 6 (2024)
Md Torikul Islam, Yang Liu, Md Mahmudul Hassan, Paul E Abraham, Jean Merlet, Alice Townsend, Daniel Jacobson, C Robin Buell, Gerald A Tuskan, Xiaohan Yang
Advances in the Application of Single-Cell Transcriptomics in Plant Systems and Synthetic Biology. Biodesign research 6 (2024)
Guanglin Zhu, Xinzhi Zhou, Mingzhang Wen, Jianjun Qiao, Guo Li, Yuan Yao
CRISPR-Cas13: Pioneering RNA Editing for Nucleic Acid Therapeutics. Biodesign research 6 (2024)
Yuanwei Gou, Xiaojing Jiang, Jiazhang Lian
Intricate Metabolic Network for Paclitaxel Biosynthesis. Biodesign research 6 (2024)
Xinyue Gui, Fei Li, Xinyu Cui, Ranran Wu, Dingyu Liu, Chunling Ma, Lijuan Ma, Huifeng Jiang, Chun You, Zhiguang Zhu
A Light-Driven In Vitro Enzymatic Biosystem for the Synthesis of α-Farnesene from Methanol. Biodesign research 6 (2024)
Huanyu Chu, Zhenyang Tian, Lingling Hu, Hejian Zhang, Hong Chang, Jie Bai, Dingyu Liu, Lina Lu, Jian Cheng, Huifeng Jiang
High-Temperature Tolerance Protein Engineering through Deep Evolution. Biodesign research 6 (2024)
Jian Fan, Yang Zhang, Wenhao Li, Zhizhen Li, Danli Zhang, Qiwen Mo, Mingfeng Cao, Jifeng Yuan
Multidimensional Optimization of Saccharomyces cerevisiae for Carotenoid Overproduction. Biodesign research 6 (2024)

volume 5, 2023

Chenqi Niu, Juewen Liu, Xinhui Xing, Chong Zhang
Exploring the Trans-Cleavage Activity with Rolling Circle Amplification for Fast Detection of miRNA. Biodesign research 5 (2023)
Ling Liu, Shimaa Elsayed Helal, Nan Peng
CRISPR-Cas-Based Engineering of Probiotics. Biodesign research 5 (2023)
Ying-Chiang J Lee, Xuanqi Chen, Siddharth Marwaha
The Need for Biosecurity Education in Biotechnology Curricula. Biodesign research 5 (2023)
Marco Pardo-Freire, Pilar Domingo-Calap
Phages and Nanotechnology: New Insights against Multidrug-Resistant Bacteria. Biodesign research 5 (2023)
Tea Crnković, Benjamin J Bokor, Mead E Lockwood, Virginia W Cornish
Peptide Variant Detection by a Living Yeast Biosensor via an Epitope-Selective Protease. Biodesign research 5 (2023)
Josef Paul Kynast, Birte Höcker
Atligator Web: A Graphical User Interface for Analysis and Design of Protein-Peptide Interactions. Biodesign research 5 (2023)
Dennis Tin Chat Chan, Geoff S Baldwin, Hans C Bernstein
Revealing the Host-Dependent Nature of an Engineered Genetic Inverter in Concordance with Physiology. Biodesign research 5 (2023)
Stephanie L Brumwell, Katherine D Van Belois, Daniel P Nucifora, Bogumil J Karas
SLICER: A Seamless Gene Deletion Method for Deinococcus radiodurans . Biodesign research 5 (2023)
Satya Prakash, Adrian Racovita, Teresa Petrucci, Roberto Galizi, Alfonso Jaramillo
qSanger: Quantification of Genetic Variants in Bacterial Cultures by Sanger Sequencing. Biodesign research 5 (2023)
Wei Zhong, Hailong Li, Yajie Wang
Design and Construction of Artificial Biological Systems for One-Carbon Utilization. Biodesign research 5 (2023)
Ying-Chiang Jeffrey Lee, Bahar Javdan
Ice Cores as a Source for Antimicrobials: From Bioprospecting to Biodesign. Biodesign research 5 (2023)
Yuling Jiao, Ying Wang
Towards Plant Synthetic Genomics. Biodesign research 5 (2023)
Na Kong, Hongru Ma, Zhongji Pu, Fengju Wan, Dongfang Li, Lei Huang, Jiazhang Lian, Xingxu Huang, Shengjie Ling, Haoran Yu, Yuan Yao
De Novo Design and Synthesis of Polypeptide Immunomodulators for Resetting Macrophage Polarization. Biodesign research 5 (2023)
Emily M Bennett, James W Murray, Mark Isalan
Engineering Nitrogenases for Synthetic Nitrogen Fixation: From Pathway Engineering to Directed Evolution. Biodesign research 5 (2023)
Emily G Brooks, Estefania Elorriaga, Yang Liu, James R Duduit, Guoliang Yuan, Chung-Jui Tsai, Gerald A Tuskan, Thomas G Ranney, Xiaohan Yang, Wusheng Liu
Plant Promoters and Terminators for High-Precision Bioengineering. Biodesign research 5 (2023)

volume 2022, 2022

Diane DiEuliis
Perspective: The Rapidly Expanding Need for Biosecurity by Design. Biodesign research 2022 (2022)
Olga Khersonsky, Sarel Jacob Fleishman
What Have We Learned from Design of Function in Large Proteins? Biodesign research 2022 (2022)
Zhiyuan Niu, Zhixia Luo, Pengyang Sun, Linwei Ning, Xinru Jin, Guanxu Chen, Changjiang Guo, Lingtong Zhi, Wei Chang, Wuling Zhu
In Vitro Nanobody Library Construction by Using Gene Designated-Region Pan-Editing Technology. Biodesign research 2022 (2022)