Aaron T L Lun (Aaron Lun, Gordon K Smyth)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2022
Publications (10 Years): 11

Top Venues

Nature biotechnology

Nature communications

PLoS genetics

Nature methods

Genentech Inc

Walter and Eliza Hall Institute of Medical Research (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Genentech Inc Mar 04 2019

United States

Scientist :: Bioinformatics and Computational Biology

Cancer Research UK Cambridge Research Institute Sep 22 2015 - Feb 28 2019

United Kingdom

Research Associate :: Bioinformatics

Education History

Walter and Eliza Hall Institute of Medical Research Feb 01 2012 - Jul 31 2015

Australia

PHD :: Bioinformatics Division

University of Sydney Mar 25 2008 - Oct 15 2011

Australia

BSC :: School of Molecular Biology

Publications

Dario Righelli, Lukas M Weber, Helena Lucia Crowell, Brenda Pardo, Leonardo Collado-Torres, Shila Ghazanfar, Aaron T L Lun, Stephanie C Hicks, Davide Risso
SpatialExperiment: infrastructure for spatially-resolved transcriptomics data in R using Bioconductor. Bioinformatics (Oxford, England) 38 (11) (2022)
Kelvin Yin, Daniel A Patten, Sarah Gough, Susana de Barros Gonçalves, Adelyne Sue Li Chan, Ioana Olan, Liam D Cassidy, Marta Poblocka, Haoran Zhu, Aaron T L Lun, Martijn Schuijs, Andrew R J Young, Celia Pilar Martinez-Jimenez, Timotheus Y F Halim, Shishir Shetty, Masashi Narita, Matthew Hoare
Senescence-induced endothelial phenotypes underpin immune-mediated senescence surveillance. Genes & development 36 (9-10) (2022)
Rebecca V Berrens, Andrian Yang, Christopher E Laumer, Aaron T L Lun, Florian Bieberich, Cheuk-Ting Law, Guocheng Lan, Maria Imaz, Joseph S Bowness, Neil Brockdorff, Daniel J Gaffney, John C Marioni
Locus-specific expression of transposable elements in single cells with CELLO-seq. Nature biotechnology (2021)
Lovorka Stojic, Aaron T L Lun, Patrice Mascalchi, Christina Ernst, Aisling M Redmond, Jasmin Mangei, Alexis R Barr, Vicky Bousgouni, Chris Bakal, John C Marioni, Duncan T Odom, Fanni Gergely
A high-content RNAi screen reveals multiple roles for long noncoding RNAs in cell division. Nature communications 11 (1) (2020)
Arianne C Richard, Aaron T L Lun, Winnie W Y Lau, Berthold Göttgens, John C Marioni, Gillian M Griffiths
T cell cytolytic capacity is independent of initial stimulation strength. Nature immunology 19 (8) (2018)
Aaron T L Lun, Hervé Pagès, Mike L Smith
beachmat: A Bioconductor C++ API for accessing high-throughput biological data from a variety of R matrix types. PLoS computational biology 14 (5) (2018)
Jonathan A Griffiths, Arianne C Richard, Karsten Bach, Aaron T L Lun, John C Marioni
Detection and removal of barcode swapping in single-cell RNA-seq data. Nature communications 9 (1) (2018)
Laleh Haghverdi, Aaron T L Lun, Michael D Morgan, John C Marioni
Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors. Nature biotechnology 36 (5) (2018)
Timothy M Johanson, Hannah D Coughlan, Aaron T L Lun, Naiara G Bediaga, Gaetano Naselli, Alexandra L Garnham, Leonard C Harrison, Aaron T L Lun, Rhys S Allan
Genome-wide analysis reveals no evidence of trans chromosomal regulation of mammalian immune development. PLoS genetics 14 (6) (2018)
Omer Ziv, Marta M Gabryelska, Aaron T L Lun, Luca F R Gebert, Jessica Sheu-Gruttadauria, Luke W Meredith, Zhong-Yu Liu, Chun Kit Kwok, Cheng-Feng Qin, Ian J MacRae, Ian Goodfellow, John C Marioni, Grzegorz Kudla, Eric Alexander Miska
COMRADES determines in vivo RNA structures and interactions. Nature methods 15 (10) (2018)
Aaron T L Lun, Aaron T L Lun
No counts, no variance: allowing for loss of degrees of freedom when assessing biological variability from RNA-seq data. Statistical applications in genetics and molecular biology 16 (2) (2018)

Aaron T L Lun.css-eqlu8i{font-size:small;padding-left:4px;} (Aaron Lun, Gordon K Smyth)

Publication Activity (10 Years)

Top Topics

Top Venues

Aaron T L Lun (Aaron Lun, Gordon K Smyth)