Alessandra Carbone (A Carbone)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 19

Top Venues

PLoS computational biology

Proteins

Nucleic acids research

BMC bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Yasser Mohseni Behbahani, Paul Saighi, Flavia Corsi, Elodie Laine, Alessandra Carbone
LEVELNET to visualize, explore, and compare protein-protein interaction networks. Proteomics (2023)
Francesco Oteri, Edoardo Sarti, Francesca Nadalin, Alessandra Carbone
iBIS2Analyzer: a web server for a phylogeny-driven coevolution analysis of protein families. Nucleic acids research (2022)
R Vicedomini, Jean-Pierre Bouly, Elodie Laine, A Falciatore, Alessandra Carbone
Multiple Profile Models Extract Features from Protein Sequence Data and Resolve Functional Diversity of Very Different Protein Families. Molecular biology and evolution 39 (4) (2022)
Chloé Dequeker, Yasser Mohseni Behbahani, Laurent David, Elodie Laine, Alessandra Carbone
From complete cross-docking to partners identification and binding sites predictions. PLoS computational biology 18 (1) (2022)
Beatriz Seoane, Alessandra Carbone
Soft disorder modulates the assembly path of protein complexes. PLoS computational biology 18 (11) (2022)
Yasser Mohseni Behbahani, Simon Crouzet, Elodie Laine, Alessandra Carbone
Deep Local Analysis evaluates protein docking conformations with locally oriented cubes. Bioinformatics (Oxford, England) 38 (19) (2022)
Beatriz Seoane, Alessandra Carbone
The complexity of protein interactions unravelled from structural disorder. PLoS computational biology 17 (1) (2021)
Jimena Pérez-Vargas, Elin Teppa, Fouzia Amirache, Bertrand Boson, Rémi Pereira de Oliveira, Christophe Combet, Anja Böckmann, Floriane Fusil, Natalia Freitas, Alessandra Carbone, François-Loïc Cosset
A fusion peptide in preS1 and the human protein disulfide isomerase ERp57 are involved in hepatitis B virus membrane fusion process. eLife 10 (2021)
Riccardo Vicedomini, Clémence Blachon, Francesco Oteri, Alessandra Carbone
MyCLADE: a multi-source domain annotation server for sequence functional exploration. Nucleic acids research 49 (W1) (2021)
Elin Teppa, Francesca Nadalin, Christophe Combet, Diego Javier Zea, Laurent David, Alessandra Carbone
Coevolution analysis of amino-acids reveals diversified drug-resistance solutions in viral sequences: a case study of hepatitis B virus. Virus evolution 6 (1) (2020)
Roberto A Boto, Francesca Peccati, Milagros Medina, Chaoyu Quan, Alessandra Carbone, Jean-Philip Piquemal, Yvon Maday, Julia Contreras-García
NCIPLOT4: Fast, Robust, and Quantitative Analysis of Noncovalent Interactions. Journal of chemical theory and computation 16 (7) (2020)
Flavia Corsi, Richard Lavery, Elodie Laine, Alessandra Carbone
Multiple protein-DNA interfaces unravelled by evolutionary information, physico-chemical and geometrical properties. PLoS computational biology 16 (2) (2020)
Yasaman Karami, Paul Saighi, Rémy Vanderhaegen, Denis Gerlier, Sonia Longhi, Elodie Laine, Alessandra Carbone
Predicting substitutions to modulate disorder and stability in coiled-coils. BMC bioinformatics 21 (Suppl 19) (2020)
Chloé Dequeker, Elodie Laine, Alessandra Carbone
Decrypting protein surfaces by combining evolution, geometry, and molecular docking. Proteins 87 (11) (2019)
Marc F Lensink, Guillaume Brysbaert, Nurul Nadzirin, Sameer Velankar, Raphael A G Chaleil, Tereza Gerguri, Paul A Bates, Elodie Laine, Alessandra Carbone, Sergei Grudinin, Ren Kong, Ran-Ran Liu, Xi-Ming Xu, Hang Shi, Shan Chang, Miriam Eisenstein, Agnieszka Karczynska, Cezary Czaplewski, Emilia Lubecka, Agnieszka Lipska, Paweł Krupa, Magdalena Mozolewska, Łukasz Golon, Sergey Samsonov, Adam Liwo, Silvia Crivelli, Guillaume Pagès, Mikhail Karasikov, Maria Kadukova, Yumeng Yan, Sheng-You Huang, Mireia Rosell, Luis A Rodríguez-Lumbreras, Miguel Romero-Durana, Lucía Díaz-Bueno, Juan Fernández-Recio, Charles W Christoffer, Genki Terashi, Woong-Hee Shin, Tunde Aderinwale, Sai Raghavendra Maddhuri Venkata Subraman, Daisuke Kihara, Dima Kozakov, Sandor Vajda, Kathryn Porter, Dzmitry Padhorny, Israel Desta, Dmitri Beglov, Mikhail Ignatov, Sergey Kotelnikov, Iain H Moal, David W Ritchie, Isaure Chauvot de Beauchene, Bernard Maigret, Marie-Dominique Devignes, Maria E Ruiz Echartea, Didier Barradas-Bautista, Zhen Cao, Luigi Cavallo, Romina Oliva, Yue Cao, Yang Shen, Minkyung Baek, Taeyong Park, Hyeonuk Woo, Chaok Seok, Merav Braitbard, Lirane Bitton, Dina Scheidman-Duhovny, Justas Dapkunas, Kliment Olechnovič, Česlovas Venclovas, Petras J Kundrotas, Saveliy Belkin, Devlina Chakravarty, Varsha D Badal, Ilya A Vakser, Thom Vreven, Sweta Vangaveti, Tyler Borrman, Nishigandha Phalke, Johnathan D Guest, Ragul Gowthaman, Brian G Pierce, Xianjin Xu, Rui Duan, Liming Qiu, Jie Hou, Benjamin Ryan Merideth, Zhiwei Ma, Jianlin Cheng, Xiaoqin Zou, Panagiotis I Koukos, Jorge Roel-Touris, Francesco Ambrosetti, Cunliang Geng, Jörg Schaarschmidt, Mikael E Trellet, Adrien S J Melquiond, Li Xue, Brian Jiménez-García, Charlotte W van Noort, Rodrigo V Honorato, Alexandre M J J Bonvin, Shoshana J Wodak
Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment. Proteins 87 (12) (2019)
Ari Ugarte, Riccardo Vicedomini, Juliana Bernardes, Alessandra Carbone
A multi-source domain annotation pipeline for quantitative metagenomic and metatranscriptomic functional profiling. Microbiome 6 (1) (2018)
Nika Abdollahi, Alexandre Albani, Eric Anthony, Agnes Baud, Mélissa Cardon, Robert Clerc, Dariusz Czernecki, Romain Conte, Laurent David, Agathe Delaune, Samia Djerroud, Pauline Fourgoux, Nadège Guiglielmoni, Jeanne Laurentie, Nathalie Lehmann, Camille Lochard, Rémi Montagne, Vasiliki Myrodia, Vaitea Opuu, Elise Parey, Lélia Polit, Sylvain Privé, Chloé Quignot, Maria Ruiz-Cuevas, Mariam Sissoko, Nicolas Sompairac, Audrey Vallerix, Violaine Verrecchia, Marc Delarue, Raphael Guérois, Yann Ponty, Sophie Sacquin-Mora, Alessandra Carbone, Christine Froidevaux, Stéphane Le Crom, Olivier Lespinet, Martin Weigt, Samer Abboud, Juliana Silva Bernardes, Guillaume Bouvier, Chloé Dequeker, Arnaud Ferré, Patrick F J Fuchs, Gaëlle Lelandais, Pierre Poulain, Hugues Richard, Hugo Schweke, Elodie Laine, Anne Lopes
Meet-U: Educating through research immersion. PLoS computational biology 14 (3) (2018)
Sylvie Briquet, Asma Ourimi, Cédric Pionneau, Juliana Bernardes, Alessandra Carbone, Solenne Chardonnet, Catherine Vaquero
Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. PloS one 13 (10) (2018)
Chloé Dequeker, Elodie Laine, Alessandra Carbone
INTerface Builder: A Fast Protein-Protein Interface Reconstruction Tool. Journal of chemical information and modeling 57 (11) (2017)

Alessandra Carbone.css-eqlu8i{font-size:small;padding-left:4px;} (A Carbone)

Publication Activity (10 Years)

Top Topics

Top Venues

Alessandra Carbone (A Carbone)