Česlovas Venclovas

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 22

Top Topics

Protein Protein

Top Venues

Nucleic acids research

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Justas Dapkunas, Albertas Timinskas, Kliment Olechnovič, Miglė Tomkuvienė, Česlovas Venclovas
PPI3D: a web server for searching, analyzing and modeling protein-protein, protein-peptide and protein-nucleic acid interactions. Nucleic acids research (2024)
Elena Manakova, Edvardas Golovinas, Reda Pocevičiūtė, Giedrius Sasnauskas, Arunas Silanskas, Danielis Rutkauskas, Marija Jankunec, Evelina Zagorskaitė, Edvinas Jurgelaitis, Algirdas Grybauskas, Česlovas Venclovas, Mindaugas Zaremba
The missing part: the Archaeoglobus fulgidus Argonaute forms a functional heterodimer with an N-L1-L2 domain protein. Nucleic acids research 52 (5) (2024)
Elena Manakova, Edvardas Golovinas, Reda Pocevičiūtė, Giedrius Sasnauskas, Arunas Silanskas, Danielis Rutkauskas, Marija Jankunec, Evelina Zagorskaitė, Edvinas Jurgelaitis, Algirdas Grybauskas, Česlovas Venclovas, Mindaugas Zaremba
The missing part: the Archaeoglobus fulgidus Argonaute forms a functional heterodimer with an N-L1-L2 domain protein. Nucleic acids research 52 (5) (2024)
Elena Manakova, Edvardas Golovinas, Reda Pocevičiūtė, Giedrius Sasnauskas, Arunas Silanskas, Danielis Rutkauskas, Marija Jankunec, Evelina Zagorskaitė, Edvinas Jurgelaitis, Algirdas Grybauskas, Česlovas Venclovas, Mindaugas Zaremba
The missing part: the Archaeoglobus fulgidus Argonaute forms a functional heterodimer with an N-L1-L2 domain protein. Nucleic acids research 52 (5) (2024)
Justas Dapkunas, Albertas Timinskas, Kliment Olechnovič, Miglė Tomkuvienė, Česlovas Venclovas
PPI3D: a web server for searching, analyzing and modeling protein-protein, protein-peptide and protein-nucleic acid interactions. Nucleic acids research 52 (W1) (2024)
Justas Dapkunas, Albertas Timinskas, Kliment Olechnovič, Miglė Tomkuvienė, Česlovas Venclovas
PPI3D: a web server for searching, analyzing and modeling protein-protein, protein-peptide and protein-nucleic acid interactions. Nucleic acids research 52 (W1) (2024)
Elena Manakova, Edvardas Golovinas, Reda Pocevičiūtė, Giedrius Sasnauskas, Arunas Silanskas, Danielis Rutkauskas, Marija Jankunec, Evelina Zagorskaitė, Edvinas Jurgelaitis, Algirdas Grybauskas, Česlovas Venclovas, Mindaugas Zaremba
The missing part: the Archaeoglobus fulgidus Argonaute forms a functional heterodimer with an N-L1-L2 domain protein. Nucleic acids research (2024)
Kliment Olechnovič, Česlovas Venclovas
VoroIF-GNN: Voronoi tessellation-derived protein-protein interface assessment using a graph neural network. Proteins (2023)
Giedrius Sasnauskas, Giedrė Tamulaitienė, Gytis Druteika, Arturo Carabias, Arunas Silanskas, Darius Kazlauskas, Česlovas Venclovas, Guillermo Montoya, Tautvydas Karvelis, Virginijus Siksnys
TnpB structure reveals minimal functional core of Cas12 nuclease family. Nature (2023)
Irmantas Mogila, Giedrė Tamulaitienė, Konstanty Keda, Albertas Timinskas, Audrone Ruksenaite, Giedrius Sasnauskas, Česlovas Venclovas, Virginijus Siksnys, Gintautas Tamulaitis
Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling. Science (New York, N.Y.) 382 (6674) (2023)
Andriy Kryshtafovych, John Moult, Wendy M Billings, Dennis Della Corte, Krzysztof Fidelis, Sohee Kwon, Kliment Olechnovič, Chaok Seok, Česlovas Venclovas, Jonghun Won, null null
Modeling SARS-CoV-2 proteins in the CASP-commons experiment. Proteins 89 (12) (2021)
Tautvydas Karvelis, Gytis Druteika, Greta Bigelyte, Karolina Budre, Rimante Zedaveinyte, Arunas Silanskas, Darius Kazlauskas, Česlovas Venclovas, Virginijus Siksnys
Transposon-associated TnpB is a programmable RNA-guided DNA endonuclease. Nature 599 (7886) (2021)
Marc F Lensink, Guillaume Brysbaert, Théo Mauri, Nurul Nadzirin, Sameer Velankar, Raphael A G Chaleil, Tereza Clarence, Paul A Bates, Ren Kong, Bin Liu, Guangbo Yang, Ming Liu, Hang Shi, Xufeng Lu, Shan Chang, Raj S Roy, Farhan Quadir, Jian Liu, Jianlin Cheng, Anna Antoniak, Cezary Czaplewski, Artur Giełdoń, Mateusz Kogut, Agnieszka G Lipska, Adam Liwo, Emilia A Lubecka, Martyna Maszota-Zieleniak, Adam K Sieradzan, Rafał Ślusarz, Patryk A Wesołowski, Karolina Zięba, Carlos A Del Carpio Muñoz, Eiichiro Ichiishi, Ameya Harmalkar, Jeffrey J Gray, Alexandre M J J Bonvin, Francesco Ambrosetti, Rodrigo Vargas Honorato, Zuzana Jandova, Brian Jiménez-García, Panagiotis I Koukos, Siri Van Keulen, Charlotte W Van Noort, Manon Réau, Jorge Roel-Touris, Sergei Kotelnikov, Dzmitry Padhorny, Kathryn A Porter, Andrey Alekseenko, Mikhail Ignatov, Israel Desta, Ryota Ashizawa, Zhuyezi Sun, Usman Ghani, Nasser Hashemi, Sandor Vajda, Dima Kozakov, Mireia Rosell, Luis A Rodríguez-Lumbreras, Juan Fernández-Recio, Agnieszka Karczynska, Sergei Grudinin, Yumeng Yan, Hao Li, Peicong Lin, Sheng-You Huang, Charles W Christoffer, Genki Terashi, Jacob Verburgt, Daipayan Sarkar, Tunde Aderinwale, Xiao Wang, Daisuke Kihara, Tsukasa Nakamura, Yuya Hanazono, Ragul Gowthaman, Johnathan D Guest, Rui Yin, Ghazaleh Taherzadeh, Brian G Pierce, Didier Barradas-Bautista, Zhen Cao, Luigi Cavallo, Romina Oliva, Yuanfei Sun, Shaowen Zhu, Yang Shen, Taeyong Park, Hyeonuk Woo, Jinsol Yang, Sohee Kwon, Jonghun Won, Chaok Seok, Yasuomi Kiyota, Shinpei Kobayashi, Yoshiki Harada, Mayuko Takeda-Shitaka, Petras J Kundrotas, Amar Singh, Ilya A Vakser, Justas Dapkunas, Kliment Olechnovič, Česlovas Venclovas, Rui Duan, Liming Qiu, Xianjin Xu, Shuang Zhang, Xiaoqin Zou, Shoshana J Wodak
Prediction of protein assemblies, the next frontier: The CASP14-CAPRI experiment. Proteins 89 (12) (2021)
Justas Dapkunas, Kliment Olechnovič, Česlovas Venclovas
Modeling of protein complexes in CASP14 with emphasis on the interaction interface prediction. Proteins 89 (12) (2021)
Maris Laan, Laura Kasak, Kęstutis Timinskas, Marina Grigorova, Česlovas Venclovas, Alexandre Renaux, Tom Lenaerts, Margus Punab
NR5A1 c.991-1G > C splice-site variant causes familial 46,XY partial gonadal dysgenesis with incomplete penetrance. Clinical endocrinology 94 (4) (2020)
Justas Dapkunas, Visvaldas Kairys, Kliment Olechnovič, Česlovas Venclovas
Template-based modeling of diverse protein interactions in CAPRI rounds 38-45. Proteins 88 (8) (2019)
Jianlin Cheng, Myong-Ho Choe, Arne Elofsson, Kun-Sop Han, Jie Hou, Ali H A Maghrabi, Liam James McGuffin, David Menéndez-Hurtado, Kliment Olechnovič, Torsten Schwede, Gabriel Studer, Karolis Uziela, Česlovas Venclovas, Björn Wallner
Estimation of model accuracy in CASP13. Proteins 87 (12) (2019)
Kira S Makarova, Yuri I Wolf, Jaime Iranzo, Sergey A Shmakov, Omer S Alkhnbashi, Stan J J Brouns, Emmanuelle Charpentier, David Cheng, Daniel H Haft, Philippe Horvath, Sylvain Moinau, Francisco J M Mojica, David Scott, Shiraz A Shah, Virginijus Siksnys, Michael P Terns, Česlovas Venclovas, Malcolm F White, Alexander F Yakunin, Winston Yan, Feng Zhang, Roger A Garrett, Rolf Backofen, John van der Oost, Rodolphe Barrangou, Eugene V Koonin
Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants. Nature reviews. Microbiology 18 (2) (2019)
Marc F Lensink, Guillaume Brysbaert, Nurul Nadzirin, Sameer Velankar, Raphael A G Chaleil, Tereza Gerguri, Paul A Bates, Elodie Laine, Alessandra Carbone, Sergei Grudinin, Ren Kong, Ran-Ran Liu, Xi-Ming Xu, Hang Shi, Shan Chang, Miriam Eisenstein, Agnieszka Karczynska, Cezary Czaplewski, Emilia Lubecka, Agnieszka Lipska, Paweł Krupa, Magdalena Mozolewska, Łukasz Golon, Sergey Samsonov, Adam Liwo, Silvia Crivelli, Guillaume Pagès, Mikhail Karasikov, Maria Kadukova, Yumeng Yan, Sheng-You Huang, Mireia Rosell, Luis A Rodríguez-Lumbreras, Miguel Romero-Durana, Lucía Díaz-Bueno, Juan Fernández-Recio, Charles W Christoffer, Genki Terashi, Woong-Hee Shin, Tunde Aderinwale, Sai Raghavendra Maddhuri Venkata Subraman, Daisuke Kihara, Dima Kozakov, Sandor Vajda, Kathryn Porter, Dzmitry Padhorny, Israel Desta, Dmitri Beglov, Mikhail Ignatov, Sergey Kotelnikov, Iain H Moal, David W Ritchie, Isaure Chauvot de Beauchene, Bernard Maigret, Marie-Dominique Devignes, Maria E Ruiz Echartea, Didier Barradas-Bautista, Zhen Cao, Luigi Cavallo, Romina Oliva, Yue Cao, Yang Shen, Minkyung Baek, Taeyong Park, Hyeonuk Woo, Chaok Seok, Merav Braitbard, Lirane Bitton, Dina Scheidman-Duhovny, Justas Dapkunas, Kliment Olechnovič, Česlovas Venclovas, Petras J Kundrotas, Saveliy Belkin, Devlina Chakravarty, Varsha D Badal, Ilya A Vakser, Thom Vreven, Sweta Vangaveti, Tyler Borrman, Nishigandha Phalke, Johnathan D Guest, Ragul Gowthaman, Brian G Pierce, Xianjin Xu, Rui Duan, Liming Qiu, Jie Hou, Benjamin Ryan Merideth, Zhiwei Ma, Jianlin Cheng, Xiaoqin Zou, Panagiotis I Koukos, Jorge Roel-Touris, Francesco Ambrosetti, Cunliang Geng, Jörg Schaarschmidt, Mikael E Trellet, Adrien S J Melquiond, Li Xue, Brian Jiménez-García, Charlotte W van Noort, Rodrigo V Honorato, Alexandre M J J Bonvin, Shoshana J Wodak
Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment. Proteins 87 (12) (2019)
Justas Dapkunas, Kliment Olechnovič, Česlovas Venclovas
Structural modeling of protein complexes: Current capabilities and challenges. Proteins 87 (12) (2019)
Migle Kazlauskiene, Georgij Kostiuk, Česlovas Venclovas, Gintautas Tamulaitis, Virginijus Siksnys
A cyclic oligonucleotide signaling pathway in type III CRISPR-Cas systems. Science (New York, N.Y.) 357 (6351) (2017)
Justas Dapkūnas, Kliment Olechnovič, Česlovas Venclovas
Modeling of protein complexes in CAPRI Round 37 using template-based approach combined with model selection. Proteins (2017)