Alexander Dobin (Dobin Alexander, Alex Dobin)

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 7

Top Topics

Induced Pluripotent Stem Cells

Convolutional Neural Network

Quality Control

Top Venues

bioRxiv : the preprint server for biology

Genome research

Research square

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Rebecca Asiimwe, Alexander Dobin
STAR+WASP reduces reference bias in the allele-specific mapping of RNA-seq reads. bioRxiv : the preprint server for biology (2024)
Rebecca Asiimwe, Alexander Dobin
STAR+WASP reduces reference bias in the allele-specific mapping of RNA-seq reads. bioRxiv : the preprint server for biology (2024)
Nikolas L Jorstad, Janet H T Song, David Exposito-Alonso, Hamsini Suresh, Nathan Castro-Pacheco, Fenna M Krienen, Anna Marie Yanny, Jennie Close, Emily Gelfand, Brian R Long, Stephanie C Seeman, Kyle J Travaglini, Soumyadeep Basu, Marc Beaudin, Darren Bertagnolli, Megan Crow, Song-Lin Ding, Jeroen Eggermont, Alexandra Glandon, Jeff Goldy, Katelyn Kiick, Thomas Kroes, Delissa A McMillen, Trangthanh H Pham, Christine Rimorin, Kimberly Siletti, Saroja Somasundaram, Michael Tieu, Amy Torkelson, Guoping Feng, William D Hopkins, Thomas Höllt, C Dirk Keene, Sten Linnarsson, Steven A McCarroll, Boudewijn P F Lelieveldt, Chet C Sherwood, Kimberly A Smith, Christopher A Walsh, Alexander Dobin, Jonathan M Werner, Ed S Lein, Rebecca D Hodge, Trygve E Bakken
Comparative transcriptomics reveals human-specific cortical features. Science (New York, N.Y.) 382 (6667) (2023)
Hamsini Suresh, Megan Crow, Nikolas Jorstad, Rebecca Hodge, Ed Lein, Alexander Dobin, Trygve E Bakken, Jonathan M Werner
Comparative single-cell transcriptomic analysis of primate brains highlights human-specific regulatory evolution. Nature ecology & evolution (2023)
Benjamin Hitz, Jin-Wook Lee, Otto Jolanki, Meenakshi S Kagda, Keenan Graham, Paul Sud, Idan Gabdank, J Seth Strattan, Cricket Sloan, Timothy Dreszer, Laurence Rowe, Nikhil Podduturi, Venkat Malladi, Esther T Chan, Jean Davidson, Marcus Ho, Stuart Miyasato, Matt Simison, Forrest Tanaka, Yunhai Luo, Ian Wahling, Khine Zin Lin, Jennifer Jou, Eurie Hong, Laurence D Rowe, Richard Sandstrom, Eric Rynes, Jemma Nelson, Andrew Nishida, Alyssa Ingersoll, Michael Buckley, Mark Frerker, Daniel Kim, Nathan Boley, Diane Trout, Alexander Dobin, Sorena Rahmanian, Dana Wyman, Gabriela Balderrama-Gutierrez, Fairlie Reese, Neva C Durand, Olga Dudchenko, David Weisz, Suhas Rao, Alyssa Blackburn, Dimos Gkountaroulis, Mahdi Sadr, Moshe Olshansky, Yossi Eliaz, Dat Nguyen, Ivan Bochkov, Muhammad Saad Shamim, Ragini Mahajan, Erez Aiden, Thomas Gingeras, Simon Heath, Martin Hirst, W James Kent, Anshul Kundaje, Ali Mortazavi, Barbara J Wold, J Michael Cherry
The ENCODE Uniform Analysis Pipelines. Research square (2023)
Benjamin C Hitz, Jin-Wook Lee, Otto Jolanki, Meenakshi S Kagda, Keenan Graham, Paul Sud, Aditi K Narayanan, Benjamin C Hitz, Cricket A Sloan, Timothy Dreszer, Laurence D Rowe, Nikhil R Podduturi, Venkat S Malladi, Esther T Chan, Jean M Davidson, Brian T Lee, Stuart Miyasato, Matt Simison, Forrest Tanaka, Yunhai Luo, Ian Whaling, Eurie L Hong, Laurence D Rowe, Richard S Sandstrom, Eric Rynes, Jemma Nelson, Andrew Nishida, Alyssa Ingersoll, Michael Buckley, Mark Frerker, Daniel S Kim, Nathan Boley, Diane Trout, Alexander Dobin, Sorena Rahmanian, Dana Wyman, Gabriela Balderrama-Gutierrez, Fairlie Reese, Neva C Durand, Olga Dudchenko, David Weisz, Suhas S P Rao, Alyssa Blackburn, Dimos Gkountaroulis, Mahdi Sadr, Moshe Olshansky, Yossi Eliaz, Dat Nguyen, Ivan Bochkov, Muhammad Saad Shamim, Ragini Mahajan, Erez Lieberman Aiden, Thomas R Gingeras, Simon Charles Heath, Martin Hirst, W James Kent, Anshul Kundaje, Ali Mortazavi, Barbara J Wold, J Michael Cherry
The ENCODE Uniform Analysis Pipelines. bioRxiv : the preprint server for biology (2023)
Benjamin Kaminow, Sara Ballouz, Jonathan M Werner, Alexander Dobin
Pan-human consensus genome significantly improves the accuracy of RNA-seq analyses. Genome research 32 (4) (2022)