Alexander E Lipka

ORCID

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 16

Top Venues

University of Illinois at Urbana-Champaign

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Illinois at Urbana-Champaign Aug 16 2014

United States

Assistant Professor of Biometry :: Crop Sciences

Publications

Joyce Njoki Njuguna, Lindsay V Clark, Alexander E Lipka, Kossonou G Anzoua, Larisa Bagmet, Pavel Chebukin, Maria S Dwiyanti, Elena Dzyubenko, Nicolay Dzyubenko, Bimal Kumar Ghimire, Xiaoli Jin, Douglas A Johnson, Jens Bonderup Kjeldsen, Hironori Nagano, Ivone de Bem Oliveira, Junhua Peng, Karen Koefoed Petersen, Andrey Sabitov, Eun Soo Seong, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Patricio Munoz, Stephen P Long, Erik J Sacks
Impact of genotype-calling methodologies on genome-wide association and genomic prediction in polyploids. The plant genome (2023)
Matthew D Murphy, Samuel B Fernandes, Gota Morota, Alexander E Lipka
Assessment of two statistical approaches for variance genome-wide association studies in plants. Heredity 129 (2) (2022)
Samuel B Fernandes, Terry M Casstevens, Peter J Bradbury, Alexander E Lipka
A multi-trait multi-locus stepwise approach for conducting GWAS on correlated traits. The plant genome 15 (2) (2022)
Jiayang Xie, Samuel B Fernandes, Dustin Mayfield-Jones, Gorka Erice, Min Choi, Alexander E Lipka, Andrew D B Leakey
Optical topometry and machine learning to rapidly phenotype stomatal patterning traits for maize QTL mapping. Plant physiology 187 (3) (2022)
Ashmita Khanal, Pragya Adhikari, Christopher Kaiser, Alexander E Lipka, Tiffany M Jamann, Santiago X Mideros
Genetic mapping of sorghum resistance to an Illinois isolate of Colletotrichum sublineola. The plant genome 15 (3) (2022)
Brian R Rice, Alexander E Lipka
Diversifying maize genomic selection models. Molecular breeding : new strategies in plant improvement 41 (5) (2021)
Samuel B Fernandes, Alexander E Lipka
simplePHENOTYPES: SIMulation of pleiotropic, linked and epistatic phenotypes. BMC bioinformatics 21 (1) (2020)
Corrinne E Grover, Mi-Jeong Yoo, Meng Lin, Matthew D Murphy, David B Harker, Robert L Byers, Alexander E Lipka, Guanjing Hu, Daojun Yuan, Justin L Conover, Joshua A Udall, Andrew H Paterson, Michael A Gore, Jonathan F Wendel
Genetic Analysis of the Transition from Wild to Domesticated Cotton (Gossypium hirsutum L.). G3 (Bethesda, Md.) 10 (2) (2020)
Marcus O Olatoye, Lindsay V Clark, Nicholas R Labonte, Hongxu Dong, Maria S Dwiyanti, Kossonou G Anzoua, Joe E Brummer, Bimal K Ghimire, Elena Dzyubenko, Nikolay Dzyubenko, Larisa Bagmet, Andrey Sabitov, Pavel Chebukin, Katarzyna Głowacka, Kweon Heo, Xiaoli Jin, Hironori Nagano, Junhua Peng, Chang Y Yu, Ji Hye Yoo, Hua Zhao, Stephen P Long, Toshihiko Yamada, Erik J Sacks, Alexander E Lipka
Training Population Optimization for Genomic Selection in Miscanthus. G3 (Bethesda, Md.) 10 (7) (2020)
Sarah D Turner, Kevin Andrew Bird, Alexander E Lipka, Elizabeth G King, Timothy M Beissinger, Ruthie Angelovici
Genomic Prediction Informed by Biological Processes Expands Our Understanding of the Genetic Architecture Underlying Free Amino Acid Traits in Dry Arabidopsis Seeds. G3 (Bethesda, Md.) 10 (11) (2020)
Marianne L Emery, Abou Yobi, Clement Bagaza, Yen On Chan, Vivek Shrestha, Samuel Holden, Ella Katz, Christa Kanstrup, Alexander E Lipka, Daniel J Kliebenstein, Hussam Hassan Nour-Eldin, Ruthie Angelovici
mGWAS Uncovers Gln-Glucosinolate Seed-Specific Interaction and its Role in Metabolic Homeostasis. Plant physiology 183 (2) (2020)
Lindsay V Clark, Alexander E Lipka, Erik J Sacks
polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids. G3 (Bethesda, Md.) 9 (3) (2019)
Brian W Diers, Jim Specht, Katy Martin Rainey, Perry Cregan, Qijian Song, Vishnu Ramasubramanian, George Graef, Randall Nelson, William Schapaugh, Dechun Wang, Grover Shannon, Leah McHale, Stella K Kantartzi, Alencar Xavier, Rouf Mian, Robert M Stupar, Jean-Michel Michno, Yong-Qiang Charles An, Wolfgang Goettel, Russell Ward, Carolyn Fox, Alexander E Lipka, David L Hyten, Troy Cary, William D Beavis
Genetic Architecture of Soybean Yield and Agronomic Traits. G3 (Bethesda, Md.) 8 (10) (2018)
Angela H Chen, Weihao Ge, William Metcalf, Eric Jakobsson, Liudmila Sergeevna Mainzer, Alexander E Lipka
An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers. Heredity 122 (5) (2018)
Esperanza Shenstone, Julian Cooper, Brian Rice, Martin Bohn, Tiffany M Jamann, Alexander E Lipka
An assessment of the performance of the logistic mixed model for analyzing binary traits in maize and sorghum diversity panels. PloS one 13 (11) (2018)
Angela H Chen, Alexander E Lipka
The Use of Targeted Marker Subsets to Account for Population Structure and Relatedness in Genome-Wide Association Studies of Maize (Zea mays L.). G3 (Bethesda, Md.) 6 (8) (2016)

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Publication Activity (10 Years)

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Alexander E Lipka