Andrea Rosario Beccari (Andrea R Beccari)

Publication Activity (10 Years)

Years Active: 2020-2023
Publications (10 Years): 20

Top Topics

Respiratory Syndrome Coronavirus

Estrogen Receptor

Molecular Dynamics

Top Venues

International journal of molecular sciences

Proceedings of the National Academy of Sciences of the United States of America

Science advances

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Daniela Iaconis, Francesca Caccuri, Candida Manelfi, Carmine Talarico, Antonella Bugatti, Federica Filippini, Alberto Zani, Rubina Novelli, Maria Kuzikov, Bernhard Ellinger, Philip Gribbon, Kristoffer Riecken, Francesca Esposito, Angela Corona, Enzo Tramontano, Andrea Rosario Beccari, Arnaldo Caruso, Marcello Allegretti
DHFR Inhibitors Display a Pleiotropic Anti-Viral Activity against SARS-CoV-2: Insights into the Mechanisms of Action. Viruses 15 (5) (2023)
Silvia Gervasoni, Candida Manelfi, Sara Adobati, Carmine Talarico, Akash Deep Biswas, Alessandro Pedretti, Vistoli Giulio, Andrea Rosario Beccari
Target Prediction by Multiple Virtual Screenings: Analyzing the SARS-CoV-2 Phenotypic Screening by the Docking Simulations Submitted to the MEDIATE Initiative. International journal of molecular sciences 25 (1) (2023)
Angelica Mazzolari, Pietro Perazzoni, Emanuela Sabato, Filippo Lunghini, Andrea Rosario Beccari, Vistoli Giulio, Alessandro Pedretti
MetaSpot: A General Approach for Recognizing the Reactive Atoms Undergoing Metabolic Reactions Based on the MetaQSAR Database. International journal of molecular sciences 24 (13) (2023)
Silvia Gervasoni, Candida Manelfi, Sara Adobati, Carmine Talarico, Akash Deep Biswas, Alessandro Pedretti, Vistoli Giulio, Andrea Rosario Beccari
Target Prediction by Multiple Virtual Screenings: Analyzing the SARS-CoV-2 Phenotypic Screening by the Docking Simulations Submitted to the MEDIATE Initiative. International journal of molecular sciences 25 (1) (2023)
Silvia Gervasoni, Candida Manelfi, Sara Adobati, Carmine Talarico, Akash Deep Biswas, Alessandro Pedretti, Vistoli Giulio, Andrea Rosario Beccari
Target Prediction by Multiple Virtual Screenings: Analyzing the SARS-CoV-2 Phenotypic Screening by the Docking Simulations Submitted to the MEDIATE Initiative. International journal of molecular sciences 25 (1) (2023)
Giovanna Grimaldi, Angela Filograna, Laura Schembri, Matteo Lo Monte, Rosaria Di Martino, Marinella Pirozzi, Daniela Spano, Andrea Rosario Beccari, Seetharaman Parashuraman, Alberto Luini, Carmen Valente, Daniela Corda
PKD-dependent PARP12-catalyzed mono-ADP-ribosylation of Golgin-97 is required for E-cadherin transport from Golgi to plasma membrane. Proceedings of the National Academy of Sciences of the United States of America 119 (1) (2022)
Silvia Gervasoni, Carmine Talarico, Candida Manelfi, Alessandro Pedretti, Vistoli Giulio, Andrea Rosario Beccari
Extensive Sampling of Molecular Dynamics Simulations to Identify Reliable Protein Structures for Optimized Virtual Screening Studies: The Case of the hTRPM8 Channel. International journal of molecular sciences 23 (14) (2022)
Serena Vittorio, Candida Manelfi, Silvia Gervasoni, Andrea Rosario Beccari, Alessandro Pedretti, Vistoli Giulio, Carmine Talarico
Computational Insights into the Sequence-Activity Relationships of the NGF(1-14) Peptide by Molecular Dynamics Simulations. Cells 11 (18) (2022)
Andrea Rosario Beccari, Vistoli Giulio
Exscalate4CoV: Innovative High Performing Computing (HPC) Strategies to Tackle Pandemic Crisis. International journal of molecular sciences 23 (19) (2022)
Ingrid Guarnetti Prandi, Carla N Mavian, Emanuela Giombini, Cesare Ernesto Maria Gruber, Daniele Pietrucci, Stefano Borocci, Nabil Abid, Andrea Rosario Beccari, Carmine Talarico, Giovanni Chillemi
Structural Evolution of Delta (B.1.617.2) and Omicron (BA.1) Spike Glycoproteins. International journal of molecular sciences 23 (15) (2022)
Isabella Romeo, Ingrid Guarnetti Prandi, Emanuela Giombini, Cesare Ernesto Maria Gruber, Daniele Pietrucci, Stefano Borocci, Nabil Abid, Anna Fava, Andrea Rosario Beccari, Giovanni Chillemi, Carmine Talarico
The Spike Mutants Website: A Worldwide Used Resource against SARS-CoV-2. International journal of molecular sciences 23 (21) (2022)
Oscar Solis, Andrea Rosario Beccari, Daniela Iaconis, Carmine Talarico, Camilo A Ruiz-Bedoya, Jerome C Nwachukwu, Annamaria Cimini, Vanessa Castelli, Riccardo Bertini, Monica Montopoli, Veronica Cocetta, Stefano Borocci, Ingrid Guarnetti Prandi, Kelly Flavahan, Melissa Bahr, Anna Napiorkowski, Giovanni Chillemi, Masato Ooka, Xiaoping Yang, Shiliang Zhang, Menghang Xia, Wei Zheng, Jordi Bonaventura, Martin G Pomper, Jody E Hooper, Marisela Morales, Avi Z Rosenberg, Kendall W Nettles, Sanjay K Jain, Marcello Allegretti, Michael Michaelides
The SARS-CoV-2 spike protein binds and modulates estrogen receptors. Science advances 8 (48) (2022)
Candida Manelfi, Marica Gemei, Carmine Talarico, Carmen Cerchia, Anna Fava, Filippo Lunghini, Andrea Rosario Beccari
"Molecular Anatomy": a new multi-dimensional hierarchical scaffold analysis tool. Journal of cheminformatics 13 (2021)
Sebastian Günther, Patrick Y A Reinke, Yaiza Fernández-García, Julia Lieske, Thomas J Lane, Helen Mary Ginn, Faisal H M Koua, Christiane Ehrt, Wiebke Ewert, Dominik Oberthür, Oleksandr Yefanov, Susanne Meier, Kristina Lorenzen, Boris Krichel, Janine-Denise Kopicki, Luca Gelisio, Wolfgang Brehm, Ilona Dunkel, Brandon Seychell, Henry Gieseler, Brenna Norton-Baker, Beatriz Escudero-Pérez, Martin Domaracky, Sofiane Saouane, Alexandra Tolstikova, Thomas A White, Anna Hänle, Michael Groessler, Holger Fleckenstein, Fabian Trost, Marina Galchenkova, Yaroslav Gevorkov, Chufeng Li, Salah Awel, Ariana Peck, Miriam Barthelmess, Frank Schlünzen, Paul Lourdu Xavier, Nadine Werner, Hina Andaleeb, Najeeb Ullah, Sven Falke, Vasundara Srinivasan, Bruno Alves França, Martin Schwinzer, Hévila Brognaro, Cromarte Rogers, Diogo Melo, Joanna J Zaitseva-Doyle, Juraj Knoška, Gisel Esperanza Pena Murillo, Aida Rahmani Mashhour, Vincent Hennicke, Pontus Fischer, Johanna Hakanpää, Jan Meyer, Philip Gribbon, Bernhard Ellinger, Maria Kuzikov, Markus Wolf, Andrea Rosario Beccari, Gleb Bourenkov, David von Stetten, Guillaume Pompidor, Isabel Bento, Saravanan Panneerselvam, Ivars Karpics, Thomas R Schneider, Maria Marta Garcia-Alai, Stephan Niebling, Christian Günther, Christina Schmidt, Robin Schubert, Huijong Han, Juliane Boger, Diana C F Monteiro, Linlin Zhang, Xinyuanyuan Sun, Jonathan Pletzer-Zelgert, Jan Wollenhaupt, Christian G Feiler, Manfred S Weiss, Eike-Christian Schulz, Pedram Mehrabi, Katarina Karničar, Aleksandra Usenik, Jure Loboda, Henning Tidow, Ashwin Chari, Rolf Hilgenfeld, Charlotte Uetrecht, Russell J Cox, Andrea Zaliani, Tobias Beck, Matthias Rarey, Stephan Gunther, Dusan Turk, Winfried Hinrichs, Henry N Chapman, Arwen R Pearson, Christian Betzel, Alke Meents
X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease. Science (New York, N.Y.) 372 (6542) (2021)
Candida Manelfi, Jonas Gossen, Silvia Gervasoni, Carmine Talarico, Simone Albani, Benjamin Joseph Philipp, Francesco Musiani, Vistoli Giulio, Sybille Krauß, Andrea Rosario Beccari, Alessandro Pedretti
Combining Different Docking Engines and Consensus Strategies to Design and Validate Optimized Virtual Screening Protocols for the SARS-CoV-2 3CL Protease. Molecules (Basel, Switzerland) 26 (4) (2021)
Stefano Borocci, Carmen Cerchia, Alessandro Grottesi, Nico Sanna, Ingrid Guarnetti Prandi, Nabil Abid, Andrea Rosario Beccari, Giovanni Chillemi, Carmine Talarico
Altered Local Interactions and Long-Range Communications in UK Variant (B.1.1.7) Spike Glycoprotein. International journal of molecular sciences 22 (11) (2021)
Alessandro Grottesi, Neva Bešker, Andrew Emerson, Candida Manelfi, Andrea Rosario Beccari, Francesco Frigerio, Erik Lindahl, Carmen Cerchia, Carmine Talarico
Computational Studies of SARS-CoV-2 3CLpro: Insights from MD Simulations. International journal of molecular sciences 21 (15) (2020)
Marica Gemei, Carmine Talarico, Laura Brandolini, Candida Manelfi, Lorena Za, Silvia Bovolenta, Chiara Liberati, Luigi Del Vecchio, Roberto Russo, Carmen Cerchia, Marcello Allegretti, Andrea Rosario Beccari
Binding Mode Exploration of B1 Receptor Antagonists' by the Use of Molecular Dynamics and Docking Simulation-How Different Target Engagement Can Determine Different Biological Effects. International journal of molecular sciences 21 (20) (2020)
Silvia Gervasoni, Giulio Vistoli, Carmine Talarico, Candida Manelfi, Andrea Rosario Beccari, Gabriel Studer, Gerardo Tauriello, Andrew Mark Waterhouse, Torsten Schwede, Alessandro Pedretti
A Comprehensive Mapping of the Druggable Cavities within the SARS-CoV-2 Therapeutically Relevant Proteins by Combining Pocket and Docking Searches as Implemented in Pockets 2.0. International journal of molecular sciences 21 (14) (2020)
Rolando Cannalire, Irina Stefanelli, Carmen Cerchia, Andrea Rosario Beccari, Sveva Pelliccia, Vincenzo Summa
SARS-CoV-2 Entry Inhibitors: Small Molecules and Peptides Targeting Virus or Host Cells. International journal of molecular sciences 21 (16) (2020)