Gerardo Tauriello

Scopus Author ID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 15

Top Topics

Molecular Dynamics Simulations

Network Analysis

Respiratory Syndrome Coronavirus

Top Venues

Nucleic acids research

Bioinformatics (Oxford, England)

This page only lists publications with an associated author ORCID identifier.

Publications

Andrew M Waterhouse, Gabriel Studer, Xavier Robin, Stefan Bienert, Gerardo Tauriello, Torsten Schwede
The structure assessment web server: for proteins, complexes and more. Nucleic acids research 52 (W1) (2024)
Lorenzo Pantolini, Gabriel Studer, Joana Pereira, Janani Durairaj, Gerardo Tauriello, Torsten Schwede
Embedding-based alignment: combining protein language models with dynamic programming alignment to detect structural similarities in the twilight-zone. Bioinformatics (Oxford, England) 40 (1) (2024)
Lorenzo Pantolini, Gabriel Studer, Joana Pereira, Janani Durairaj, Gerardo Tauriello, Torsten Schwede
Embedding-based alignment: combining protein language models with dynamic programming alignment to detect structural similarities in the twilight-zone. Bioinformatics (Oxford, England) 40 (1) (2024)
Andrew M Waterhouse, Gabriel Studer, Xavier Robin, Stefan Bienert, Gerardo Tauriello, Torsten Schwede
The structure assessment web server: for proteins, complexes and more. Nucleic acids research 52 (W1) (2024)
Lorenzo Pantolini, Gabriel Studer, Joana Pereira, Janani Durairaj, Gerardo Tauriello, Torsten Schwede
Embedding-based alignment: combining protein language models with dynamic programming alignment to detect structural similarities in the twilight-zone. Bioinformatics (Oxford, England) 40 (1) (2024)
Andrew M Waterhouse, Gabriel Studer, Xavier Robin, Stefan Bienert, Gerardo Tauriello, Torsten Schwede
The structure assessment web server: for proteins, complexes and more. Nucleic acids research (2024)
Gabriel Studer, Gerardo Tauriello, Torsten Schwede
Assessment of the assessment-All about complexes. Proteins (2023)
Hugo Schweke, Qifang Xu, Gerardo Tauriello, Lorenzo Pantolini, Torsten Schwede, Frédéric Cazals, Alix Lhéritier, Juan Fernandez-Recio, Luis Angel Rodríguez-Lumbreras, Ora Schueler-Furman, Julia K Varga, Brian Jiménez-García, Manon F Réau, Alexandre M J J Bonvin, Castrense Savojardo, Pier-Luigi Martelli, Rita Casadio, Jérôme Tubiana, Haim J Wolfson, Romina Oliva, Didier Barradas-Bautista, Tiziana Ricciardelli, Luigi Cavallo, Česlovas Venclovas, Kliment Olechnovič, Raphael Guerois, Jessica Andreani, Juliette Martin, Xiao Wang, Genki Terashi, Daipayan Sarkar, Charles W Christoffer, Tunde Aderinwale, Jacob Verburgt, Daisuke Kihara, Anthony Marchand, Bruno E Correia, Rui Duan, Liming Qiu, Xianjin Xu, Shuang Zhang, Xiaoqin Zou, Sucharita Dey, Roland L Dunbrack, Emmanuel D Levy, Shoshana J Wodak
Discriminating physiological from non-physiological interfaces in structures of protein complexes: A community-wide study. Proteomics (2023)
Janani Durairaj, Andrew M Waterhouse, Toomas Mets, Tetiana Brodiazhenko, Minhal Abdullah, Gabriel Studer, Gerardo Tauriello, Mehmet Akdel, Antonina Andreeva, Alex Bateman, Tanel Tenson, Vasili Hauryliuk, Torsten Schwede, Joana Pereira
Uncovering new families and folds in the natural protein universe. Nature (2023)
Mihaly Varadi, Sreenath Nair, Ian Sillitoe, Gerardo Tauriello, Stephen Anyango, Stefan Bienert, Clemente Borges, Mandar S Deshpande, Tim Green, Demis Hassabis, Andras Hatos, Tamás Hegedűs, Maarten L Hekkelman, Robbie P Joosten, John M Jumper, Agata Laydon, Dmitry S Molodenskiy, Damiano Piovesan, Edoardo Salladini, Steven L Salzberg, Markus J Sommer, Martin Steinegger, Erzsebet Suhajda, Dmitri I Svergun, Luiggi Tenorio-Ku, Silvio C E Tosatto, Kathryn Tunyasuvunakool, Andrew Mark Waterhouse, Augustin Žídek, Torsten Schwede, Christine A Orengo, Sameer Velankar
3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources. GigaScience 11 (2022)
Alfredo Mari, Tim Roloff, Madlen Stange, Kirstine K Søgaard, Erblin Asllanaj, Gerardo Tauriello, Leila Tamara Alexander, Michael Schweitzer, Karoline Leuzinger, Alexander Gensch, Aurélien Emmanuel Martinez, Julia Bielicki, Hans Pargger, Martin Siegemund, Christian H Nickel, Roland Bingisser, Michael Osthoff, Stefano Bassetti, Parham Sendi, Manuel Battegay, Catia Marzolini, Helena M B Seth-Smith, Torsten Schwede, Hans H Hirsch, Adrian Egli
Global Genomic Analysis of SARS-CoV-2 RNA Dependent RNA Polymerase Evolution and Antiviral Drug Resistance. Microorganisms 9 (5) (2021)
Xavier Robin, Juergen Haas, Rafal Gumienny, Anna Smolinski, Gerardo Tauriello, Torsten Schwede
Continuous Automated Model EvaluatiOn (CAMEO)-Perspectives on the future of fully automated evaluation of structure prediction methods. Proteins 89 (12) (2021)
Gabriel Studer, Gerardo Tauriello, Stefan Bienert, Marco Biasini, Niklaus Johner, Torsten Schwede
ProMod3-A versatile homology modelling toolbox. PLoS computational biology 17 (1) (2021)
Silvia Gervasoni, Giulio Vistoli, Carmine Talarico, Candida Manelfi, Andrea Rosario Beccari, Gabriel Studer, Gerardo Tauriello, Andrew Mark Waterhouse, Torsten Schwede, Alessandro Pedretti
A Comprehensive Mapping of the Druggable Cavities within the SARS-CoV-2 Therapeutically Relevant Proteins by Combining Pocket and Docking Searches as Implemented in Pockets 2.0. International journal of molecular sciences 21 (14) (2020)
Juergen Haas, Rafal Gumienny, Alessandro Barbato, Flavio Ackermann, Gerardo Tauriello, Martino Bertoni, Gabriel Studer, Anna Smolinski, Torsten Schwede
Introducing "best single template" models as reference baseline for the Continuous Automated Model Evaluation (CAMEO). Proteins 87 (12) (2019)