Andrew G McArthur (Andrew McArthur)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 20

Top Venues

Database : the journal of biological databases and curation

Microbiology spectrum

Research square

Antimicrobial agents and chemotherapy

McMaster University

University of Victoria (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

McMaster University Sep 01 2014

Canada

Associate Professor :: Biochemistry & Biomedical Sciences

McArthur Bioinformatics Consulting May 01 2006 - Aug 30 2014

Canada

CEO & Owner

University of Gothenburg Sep 01 2012 - May 01 2013

Sweden

Guest Researcher :: Biological & Environmental Sciences

Brown University Sep 01 2005 - Apr 30 2006

United States

Assistant Professor :: Molecular Biology, Cell Biology, and Biochemistry

Marine Biological Laboratory Sep 01 2003 - Apr 30 2006

United States

Assistant Scientist :: Josephine Bay Paul Centre for Comparative Molecular Biology and Evolution

Marine Biological Laboratory Jul 01 1999 - Aug 31 2003

United States

Staff Scientist II :: Josephine Bay Paul Centre for Comparative Molecular Biology and Evolution

Marine Biological Laboratory Dec 01 1998 - Jun 30 1999

United States

Postdoctoral Scientist :: Josephine Bay Paul Centre for Comparative Molecular Biology and Evolution

National Museum of Natural History, Smithsonian Institution Dec 01 1996 - Nov 30 1998

United States

Postdoctoral Fellow :: Invertebrate Zoology

Education History

University of Victoria Sep 01 1991 - Dec 01 1996

Canada

PHD :: Biology

Publications

Charles R Langelier, Dan Lu, Katrina Kalantar, Victoria Chu, Abigail Glascock, Estella Guerrero, Nina Bernick, Xochitl Butcher, Kirsty Ewing, Elizabeth Fahsbender, Olivia Holmes, Erin Hoops, Ann Jones, Ryan Lim, Suzette McCanny, Lucia Reynoso, Karyna Rosario, Jennifer Tang, Omar Valenzuela, Peter M Mourani, Amy Pickering, Amogelang Raphenya, Brian Alcock, Andrew G McArthur
Simultaneous detection of pathogens and antimicrobial resistance genes with the open source, cloud-based, CZ ID pipeline. Research square (2024)
Charles R Langelier, Dan Lu, Katrina Kalantar, Victoria Chu, Abigail Glascock, Estella Guerrero, Nina Bernick, Xochitl Butcher, Kirsty Ewing, Elizabeth Fahsbender, Olivia Holmes, Erin Hoops, Ann Jones, Ryan Lim, Suzette McCanny, Lucia Reynoso, Karyna Rosario, Jennifer Tang, Omar Valenzuela, Peter M Mourani, Amy Pickering, Amogelang Raphenya, Brian Alcock, Andrew G McArthur
Simultaneous detection of pathogens and antimicrobial resistance genes with the open source, cloud-based, CZ ID pipeline. Research square (2024)
Kara K Tsang, Shehryar Ahmad, Alanoud Aljarbou, Mohammed Al Salem, Sheridan J C Baker, Emily M Panousis, Hooman Derakhshani, Laura Rossi, Jalees A Nasir, David C Bulir, Michael G Surette, Robyn S Lee, Fiona Smaill, Dominik Mertz, Andrew G McArthur, Sarah Khan
SARS-CoV-2 Outbreak Investigation Using Contact Tracing and Whole-Genome Sequencing in an Ontario Tertiary Care Hospital. Microbiology spectrum (2023)
Kara K Tsang, Shehryar Ahmad, Alanoud Aljarbou, Mohammed Al Salem, Sheridan J C Baker, Emily M Panousis, Hooman Derakhshani, Laura Rossi, Jalees A Nasir, David C Bulir, Michael G Surette, Robyn S Lee, Fiona Smaill, Dominik Mertz, Andrew G McArthur, Sarah Khan
SARS-CoV-2 Outbreak Investigation Using Contact Tracing and Whole-Genome Sequencing in an Ontario Tertiary Care Hospital. Microbiology spectrum (2023)
Arman Edalatmand, Andrew G McArthur
CARD*Shark: automated prioritization of literature curation for the Comprehensive Antibiotic Resistance Database. Database : the journal of biological databases and curation 2023 (2023)
Arman Edalatmand, Andrew G McArthur
CARD*Shark: automated prioritization of literature curation for the Comprehensive Antibiotic Resistance Database. Database : the journal of biological databases and curation 2023 (2023)
Keaton W Smith, Brian P Alcock, Shawn French, Maya A Farha, Amogelang R Raphenya, Eric D Brown, Andrew G McArthur
A standardized nomenclature for resistance-modifying agents in the Comprehensive Antibiotic Resistance Database. Microbiology spectrum (2023)
Arman Edalatmand, Andrew G McArthur
CARD*Shark: automated prioritization of literature curation for the Comprehensive Antibiotic Resistance Database. Database : the journal of biological databases and curation 2023 (2023)
Arman Edalatmand, Andrew G McArthur
CARD*Shark: automated prioritization of literature curation for the Comprehensive Antibiotic Resistance Database. Database : the journal of biological databases and curation 2023 (2023)
Arman Edalatmand, Andrew G McArthur
CARD*Shark: automated prioritization of literature curation for the Comprehensive Antibiotic Resistance Database. Database : the journal of biological databases and curation 2023 (2023)
Kara K Tsang, Shehryar Ahmad, Alanoud Aljarbou, Mohammed Al Salem, Sheridan J C Baker, Emily M Panousis, Hooman Derakhshani, Laura Rossi, Jalees A Nasir, David C Bulir, Michael G Surette, Robyn S Lee, Fiona Smaill, Dominik Mertz, Andrew G McArthur, Sarah Khan
SARS-CoV-2 Outbreak Investigation Using Contact Tracing and Whole-Genome Sequencing in an Ontario Tertiary Care Hospital. Microbiology spectrum (2023)
Jee In Kim, Finlay Maguire, Kara K Tsang, Theodore Gouliouris, Sharon J Peacock, Tim A McAllister, Andrew G McArthur, Robert G Beiko
Machine Learning for Antimicrobial Resistance Prediction: Current Practice, Limitations, and Clinical Perspective. Clinical microbiology reviews 35 (3) (2022)
Brian P Alcock, William Huynh, Romeo Chalil, Keaton W Smith, Amogelang R Raphenya, Mateusz A Wlodarski, Arman Edalatmand, Aaron Petkau, Sohaib A Syed, Kara K Tsang, Sheridan J C Baker, Mugdha Dave, Madeline C McCarthy, Karyn M Mukiri, Jalees A Nasir, Bahar Golbon, Hamna Imtiaz, Xingjian Jiang, Komal Kaur, Megan Kwong, Zi Cheng Liang, Keyu C Niu, Prabakar Shan, Jasmine Y J Yang, Kristen L Gray, Gemma R Hoad, Baofeng Jia, Timsy Bhando, Lindsey A Carfrae, Maya A Farha, Shawn French, Rodion Gordzevich, Kenneth Rachwalski, Megan M Tu, Emily Bordeleau, Damion Dooley, Emma J Griffiths, Haley L Zubyk, Eric D Brown, Finlay Maguire, Robert G Beiko, William W L Hsiao, Fiona S L Brinkman, Gary Van Domselaar, Andrew G McArthur
CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database. Nucleic acids research (2022)
Ashley M Rooney, Amogelang R Raphenya, Roberto Gustavo Melano, Christine Seah, Noelle R Yee, Derek R MacFadden, Andrew G McArthur, Pierre H H Schneeberger, Bryan Coburn
Performance Characteristics of Next-Generation Sequencing for the Detection of Antimicrobial Resistance Determinants in Escherichia coli Genomes and Metagenomes. mSystems 7 (3) (2022)
Amogelang R Raphenya, James A Robertson, Casper Jamin, Leonardo de Oliveira Martins, Finlay Maguire, Andrew G McArthur, John Philip Hays
Datasets for benchmarking antimicrobial resistance genes in bacterial metagenomic and whole genome sequencing. Scientific data 9 (1) (2022)
Bo Wang, Evangelia E Tsakiridis, Shuman Zhang, Andrea Llanos, Eric M Desjardins, Julian M Yabut, Alexander E Green, Emily Anne Day, Brennan K Smith, James S V Lally, Jianhan Wu, Amogelang R Raphenya, Krishna A Srinivasan, Andrew G McArthur, Shingo Kajimura, Jagdish Suresh Patel, Michael G Wade, Katherine Mary Morrison, Alison C Holloway, Gregory R Steinberg
The pesticide chlorpyrifos promotes obesity by inhibiting diet-induced thermogenesis in brown adipose tissue. Nature communications 12 (1) (2021)
Calvin P Sjaarda, Jennifer L Guthrie, Samira Mubareka, Jared T Simpson, Bettina Hamelin, Henry Wong, Leanne Mortimer, Robert Slinger, Andrew G McArthur, Marc Desjardins, Allison McGeer, Tony Mazzulli, Katya Douchant, Danielle Brabant-Kirwan, Ramzi Fattouh, Aaron Campigotto, Samir N Patel, Nahuel Fittipaldi, Robert I Colautti, Prameet M Sheth
Temporal Dynamics and Evolution of SARS-CoV-2 Demonstrate the Necessity of Ongoing Viral Genome Sequencing in Ontario, Canada. mSphere 6 (3) (2021)
Jalees A Nasir, Robert A Kozak, Patryk Aftanas, Amogelang R Raphenya, Kendrick M Smith, Finlay Maguire, Hassaan Maan, Muhannad Alruwaili, Arinjay Banerjee, Hamza Mbareche, Brian P Alcock, Natalie C Knox, Karen Louise Mossman, Bo Wang, Julian A Hiscox, Andrew G McArthur, Samira Mubareka
A Comparison of Whole Genome Sequencing of SARS-CoV-2 Using Amplicon-Based Sequencing, Random Hexamers, and Bait Capture. Viruses 12 (8) (2020)
Samuel Tekeste Workenhe, Andrew Nguyen, David Bakhshinyan, Jiarun Wei, David N Hare, Kelly L MacNeill, Yonghong Wan, Andrew Oberst, Jonathan L Bramson, Jalees A Nasir, Alyssa Vito, Nader El-Sayes, Sheila K Singh, Andrew G McArthur, Karen Louise Mossman
De novo necroptosis creates an inflammatory environment mediating tumor susceptibility to immune checkpoint inhibitors. Communications biology 3 (1) (2020)
Allison K Guitor, Amogelang R Raphenya, Jennifer Klunk, Melanie Kuch, Brian Alcock, Michael G Surette, Andrew G McArthur, Hendrik N Poinar, Gerard D Wright
Capturing the Resistome: a Targeted Capture Method To Reveal Antibiotic Resistance Determinants in Metagenomes. Antimicrobial agents and chemotherapy 64 (1) (2019)

Andrew G McArthur.css-eqlu8i{font-size:small;padding-left:4px;} (Andrew McArthur)

Publication Activity (10 Years)

Top Topics

Top Venues

Andrew G McArthur (Andrew McArthur)