Anna Kreshuk (A Kreshuk)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 47

Top Topics

Convolutional Neural Network

Arabidopsis Thaliana

Endoplasmic Reticulum

Top Venues

Development (Cambridge, England)

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Marc Cicero Schubert, Stella Judith Soyka, Amr Tamimi, Emanuel Maus, Julian Schroers, Niklas Wißmann, Ekin Reyhan, Svenja Kristin Tetzlaff, Yvonne Yang, Robert Denninger, Robin Peretzke, Carlo Beretta, Michael Drumm, Alina Heuer, Verena Buchert, Alicia Steffens, Jordain Walshon, Kathleen McCortney, Sabine Heiland, Martin Bendszus, Peter F Neher, Anna Golebiewska, Wolfgang Wick, Frank Winkler, Michael O Breckwoldt, Anna Kreshuk, Thomas Kuner, Craig M Horbinski, Felix Tobias Kurz, Robert Prevedel, Varun Venkataramani
Deep intravital brain tumor imaging enabled by tailored three-photon microscopy and analysis. Nature communications 15 (1) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Athul Vijayan, Tejasvinee Atul Mody, Qin Yu, Adrian Wolny, Lorenzo Cerrone, Soeren Strauss, Miltos Tsiantis, Richard S Smith, Fred A Hamprecht, Anna Kreshuk, Kay Schneitz
A deep learning-based toolkit for 3D nuclei segmentation and quantitative analysis in cellular and tissue context. Development (Cambridge, England) 151 (14) (2024)
Athul Vijayan, Tejasvinee Atul Mody, Qin Yu, Adrian Wolny, Lorenzo Cerrone, Soeren Strauss, Miltos Tsiantis, Richard S Smith, Fred A Hamprecht, Anna Kreshuk, Kay Schneitz
A deep learning-based toolkit for 3D nuclei segmentation and quantitative analysis in cellular and tissue context. Development (Cambridge, England) 151 (14) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Athul Vijayan, Tejasvinee Atul Mody, Qin Yu, Adrian Wolny, Lorenzo Cerrone, Soeren Strauss, Miltos Tsiantis, Richard S Smith, Fred A Hamprecht, Anna Kreshuk, Kay Schneitz
A deep learning-based toolkit for 3D nuclei segmentation and quantitative analysis in cellular and tissue context. Development (Cambridge, England) 151 (14) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Annika Reinke, Minu D Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A Emre Kavur, Tim Rädsch, Carole H Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Florian Buettner, M Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A Cimini, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Jens Kleesiek, Florian Kofler, Thijs Kooi, Dominik T Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M Rafelski, Nasir M Rajpoot, Mauricio Reyes, Michael A Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Ronald M Summers, Abdel A Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Ziv Rafael Yaniv, Paul F Jaeger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. Nature methods 21 (2) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Lena Maier-Hein, Annika Reinke, Patrick Godau, Minu D Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A Riegler, Manuel Wiesenfarth, A Emre Kavur, Carole H Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B Blaschko, M Jorge Cardoso, Veronika Cheplygina, Beth A Cimini, Gary Stephen Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Robert Haase, Daniel A Hashimoto, Michael M Hoffman, Merel Huisman, Pierre Jannin, Charles E Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Dominik T Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L Martel, Peter Mattson, Erik Meijering, Bjoern H Menze, Karel G M Moons, Henning Muller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nasir M Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clara I Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A Tsaftaris, Ben Van Calster, Gael Varoquaux, Paul F Jaeger
Metrics reloaded: recommendations for image analysis validation. Nature methods 21 (2) (2024)
Irene de Teresa-Trueba, Sara K Goetz, Alexander Mattausch, Frosina Stojanovska, Christian E Zimmerli, Mauricio Toro-Nahuelpan, Dorothy W C Cheng, Fergus Tollervey, Constantin Pape, Martin Beck, Alba Diz-Muñoz, Anna Kreshuk, Julia Mahamid, Judith Barbara Zaugg
Convolutional networks for supervised mining of molecular patterns within cellular context. Nature methods 20 (2) (2023)
Ewa Sitarska, Silvia Dias Almeida, Marianne Sandvold Beckwith, Julian Stopp, Jakub Czuchnowski, Marc Siggel, Rita Roessner, Aline Tschanz, Christer Ejsing, Yannick Schwab, Jan Kosinski, Michael Sixt, Anna Kreshuk, Anna Erzberger, Alba Diz-Muñoz
Sensing their plasma membrane curvature allows migrating cells to circumvent obstacles. Nature communications 14 (1) (2023)
Irene de Teresa-Trueba, Sara K Goetz, Alexander Mattausch, Frosina Stojanovska, Christian E Zimmerli, Mauricio Toro-Nahuelpan, Dorothy W C Cheng, Fergus Tollervey, Constantin Pape, Martin Beck, Alba Diz-Muñoz, Anna Kreshuk, Julia Mahamid, Judith Barbara Zaugg
Convolutional networks for supervised mining of molecular patterns within cellular context. Nature methods 20 (2) (2023)
Valentyna Zinchenko, Johannes Hugger, Virginie Uhlmann, Detlev Arendt, Anna Kreshuk
MorphoFeatures for unsupervised exploration of cell types, tissues, and organs in volume electron microscopy. eLife 12 (2023)
Irene de Teresa-Trueba, Sara K Goetz, Alexander Mattausch, Frosina Stojanovska, Christian E Zimmerli, Mauricio Toro-Nahuelpan, Dorothy W C Cheng, Fergus Tollervey, Constantin Pape, Martin Beck, Alba Diz-Muñoz, Anna Kreshuk, Julia Mahamid, Judith Barbara Zaugg
Convolutional networks for supervised mining of molecular patterns within cellular context. Nature methods (2023)
Valentyna Zinchenko, Johannes Hugger, Virginie Uhlmann, Detlev Arendt, Anna Kreshuk
MorphoFeatures for unsupervised exploration of cell types, tissues, and organs in volume electron microscopy. eLife 12 (2023)
Irene de Teresa-Trueba, Sara K Goetz, Alexander Mattausch, Frosina Stojanovska, Christian E Zimmerli, Mauricio Toro-Nahuelpan, Dorothy W C Cheng, Fergus Tollervey, Constantin Pape, Martin Beck, Alba Diz-Muñoz, Anna Kreshuk, Julia Mahamid, Judith Barbara Zaugg
Convolutional networks for supervised mining of molecular patterns within cellular context. Nature methods 20 (2) (2023)
Valentyna Zinchenko, Johannes Hugger, Virginie Uhlmann, Detlev Arendt, Anna Kreshuk
MorphoFeatures for unsupervised exploration of cell types, tissues, and organs in volume electron microscopy. eLife 12 (2023)
Valentyna Zinchenko, Johannes Hugger, Virginie Uhlmann, Detlev Arendt, Anna Kreshuk
MorphoFeatures for unsupervised exploration of cell types, tissues, and organs in volume electron microscopy. eLife 12 (2023)
Irene de Teresa-Trueba, Sara K Goetz, Alexander Mattausch, Frosina Stojanovska, Christian E Zimmerli, Mauricio Toro-Nahuelpan, Dorothy W C Cheng, Fergus Tollervey, Constantin Pape, Martin Beck, Alba Diz-Muñoz, Anna Kreshuk, Julia Mahamid, Judith Barbara Zaugg
Convolutional networks for supervised mining of molecular patterns within cellular context. Nature methods 20 (2) (2023)
Irene de Teresa-Trueba, Sara K Goetz, Alexander Mattausch, Frosina Stojanovska, Christian E Zimmerli, Mauricio Toro-Nahuelpan, Dorothy W C Cheng, Fergus Tollervey, Constantin Pape, Martin Beck, Alba Diz-Muñoz, Anna Kreshuk, Julia Mahamid, Judith Barbara Zaugg
Convolutional networks for supervised mining of molecular patterns within cellular context. Nature methods 20 (2) (2023)
Irene de Teresa-Trueba, Sara K Goetz, Alexander Mattausch, Frosina Stojanovska, Christian E Zimmerli, Mauricio Toro-Nahuelpan, Dorothy W C Cheng, Fergus Tollervey, Constantin Pape, Martin Beck, Alba Diz-Muñoz, Anna Kreshuk, Julia Mahamid, Judith Barbara Zaugg
Convolutional networks for supervised mining of molecular patterns within cellular context. Nature methods 20 (2) (2023)
Constantin Pape, Kimberly Meechan, Ekaterina Moreva, Martin Schorb, Nicolas Chiaruttini, Valentyna Zinchenko, Hernando Martinez Vergara, Giulia Mizzon, Josh Moore, Detlev Arendt, Anna Kreshuk, Yannick Schwab, Christian Tischer
MoBIE: a Fiji plugin for sharing and exploration of multi-modal cloud-hosted big image data. Nature methods (2023)
Valentyna Zinchenko, Johannes Hugger, Virginie Uhlmann, Detlev Arendt, Anna Kreshuk
MorphoFeatures for unsupervised exploration of cell types, tissues, and organs in volume electron microscopy. eLife 12 (2023)
Athul Vijayan, Rachele Tofanelli, Sören Strauss, Lorenzo Cerrone, Adrian Wolny, Joanna Strohmeier, Anna Kreshuk, Fred A Hamprecht, Richard S Smith, Kay Schneitz
A digital 3D reference atlas reveals cellular growth patterns shaping the Arabidopsis ovule. eLife 10 (2021)
Ludovico Silvestri, Marie Caroline Müllenbroich, Irene Costantini, A P Di Giovanna, Giacomo Mazzamuto, A Franceschini, Dominik Kutra, Anna Kreshuk, Curzio Checcucci, L O Toresano, P Frasconi, Leonardo Sacconi, F S Pavone
Universal autofocus for quantitative volumetric microscopy of whole mouse brains. Nature methods 18 (8) (2021)
Jacob M Musser, Klaske J Schippers, Michael Nickel, Giulia Mizzon, Andrea B Kohn, Constantin Pape, Paolo Ronchi, Nikolaos Papadopoulos, Alexander J Tarashansky, Jörg U Hammel, Florian Wolf, Cong Liang, Ana Hernández-Plaza, Carlos P Cantalapiedra, Kaia Achim, Nicole L Schieber, Leslie Pan, Fabian Ruperti, Warren R Francis, Sergio Vargas, Svenja Kling, Maike Renkert, Maxim Polikarpov, Gleb Bourenkov, Roberto Feuda, Imre Gaspar, Pawel Burkhardt, Bo Wang, Peer Bork, Martin Beck, Thomas R Schneider, Anna Kreshuk, Gert Wörheide, Jaime Huerta-Cepas, Yannick Schwab, Leonid L Moroz, Detlev Arendt
Profiling cellular diversity in sponges informs animal cell type and nervous system evolution. Science (New York, N.Y.) 374 (6568) (2021)
Artur Speiser, Lucas-Raphael Müller, Philipp Hoess, Ulf Matti, Christopher J Obara, Wesley R Legant, Anna Kreshuk, Jakob H Macke, Jonas Ries, Srinivas C Turaga
Deep learning enables fast and dense single-molecule localization with high accuracy. Nature methods 18 (9) (2021)
Nils Wagner, Fynn Beuttenmueller, Nils Norlin, Jakob Gierten, Juan Carlos Boffi, Joachim Wittbrodt, Martin Weigert, Lars Hufnagel, Robert Prevedel, Anna Kreshuk
Deep learning-enhanced light-field imaging with continuous validation. Nature methods 18 (5) (2021)
Adrian Wolny, Lorenzo Cerrone, Athul Vijayan, Rachele Tofanelli, Amaya Vilches Barro, Marion Louveaux, Christian Wenzl, Sören Strauss, David Wilson-Sánchez, Rena Lymbouridou, Susanne S Steigleder, Constantin Pape, Alberto Bailoni, Salva Duran-Nebreda, George W Bassel, Jan U Lohmann, Miltos Tsiantis, Fred A Hamprecht, Kay Schneitz, Alexis Maizel, Anna Kreshuk
Accurate and versatile 3D segmentation of plant tissues at cellular resolution. eLife 9 (2020)