Joachim Wittbrodt (Jochen Wittbrodt, J Wittbrodt)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 42

Top Venues

eLife

Development (Cambridge, England)

PloS one

Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Ruprecht Karls Universität Heidelberg

Ludwig-Maximilians Univeristät (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Ruprecht Karls Universität Heidelberg Jan 01 2007

Germany

Full Professor :: COS Heidelberg

Ruprecht Karls Universität Heidelberg Dec 15 2014 - Jan 12 2017

Germany

Full Professor, deputy director :: Centre for Organismal Studies, COS Heidelberg

Ruprecht Karls Universität Heidelberg Jan 01 2007 - Dec 15 2014

Germany

Acting Director, Head of Department :: Centre for Organismal Studies, COS Heidelberg

Karlsruher Institut für Technologie - Campus Nord Jan 01 2006 - Jul 01 2012

Germany

Director :: Institute for Toxicology and Genetics, ITG

European Molecular Biology Laboratory Jan 01 1999 - Mar 31 2009

Germany

Group Leader :: Developmental Biology, Cell Biology and Biophysics

Max-Planck-Institut für biophysikalische Chemie Dec 01 1994 - Dec 31 1998

Germany

Junior Group Leader (SFB 271) :: Molecular Developmental Biology

Universität Basel Department Biozentrum Apr 02 1991 - Dec 01 1994

Switzerland

Post Doctoral Researcher :: Cell Biology

Education History

Ludwig-Maximilians Univeristät Nov 01 1987 - Dec 31 1990

Germany

PHD

Publications

Cassian Afting, Philipp Mainik, Clara Vazquez-Martel, Tobias Abele, Verena Kaul, Girish R Kale, Kerstin Göpfrich, Steffen Lemke, Eva Blasco, Joachim Wittbrodt
Minimal-Invasive 3D Laser Printing of Microimplants in Organismo. Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2024)
Saul Pierotti, Bettina Welz, Mireia Osuna Lopez, Tomas W Fitzgerald, Joachim Wittbrodt, Ewan Birney
Genotype imputation in F2 crosses of inbred lines. Bioinformatics advances 4 (1) (2024)
Ali Seleit, Ian Brettell, Tomas Fitzgerald, Carina Vibe, Felix Loosli, Joachim Wittbrodt, Kiyoshi Naruse, Ewan Birney, Alexander Aulehla
Modular control of vertebrate axis segmentation in time and space. The EMBO journal (2024)
Cassian Afting, Tobias Walther, Oliver M Drozdowski, Christina Schlagheck, Ulrich Sebastian Schwarz, Joachim Wittbrodt, Kerstin Göpfrich
DNA microbeads for spatio-temporally controlled morphogen release within organoids. Nature nanotechnology (2024)
Cassian Afting, Philipp Mainik, Clara Vazquez-Martel, Tobias Abele, Verena Kaul, Girish R Kale, Kerstin Göpfrich, Steffen Lemke, Eva Blasco, Joachim Wittbrodt
Minimal-Invasive 3D Laser Printing of Microimplants in Organismo. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 11 (30) (2024)
Saul Pierotti, Bettina Welz, Mireia Osuna Lopez, Tomas W Fitzgerald, Joachim Wittbrodt, Ewan Birney
Genotype imputation in F2 crosses of inbred lines. Bioinformatics advances 4 (1) (2024)
Cassian Afting, Philipp Mainik, Clara Vazquez-Martel, Tobias Abele, Verena Kaul, Girish R Kale, Kerstin Göpfrich, Steffen Lemke, Eva Blasco, Joachim Wittbrodt
Minimal-Invasive 3D Laser Printing of Microimplants in Organismo. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 11 (30) (2024)
Risa Suzuki, Jia Zheng Woo, Thomas Thumberger, Gero Hofmann, Joachim Wittbrodt, Tinatini Tavhelidse-Suck
Characterizing medaka visual features using a high-throughput optomotor response assay. PloS one 19 (6) (2024)
Risa Suzuki, Jia Zheng Woo, Thomas Thumberger, Gero Hofmann, Joachim Wittbrodt, Tinatini Tavhelidse-Suck
Characterizing medaka visual features using a high-throughput optomotor response assay. PloS one 19 (6) (2024)
Kaisa Pakari, Joachim Wittbrodt, Thomas Thumberger
De novo PAM generation to reach initially inaccessible target sites for base editing. Development (Cambridge, England) 150 (2) (2023)
Lino Doering, Alex Cornean, Thomas Thumberger, Joergen Benjaminsen, Beate Wittbrodt, Tanja Kellner, Omar T Hammouda, Matthias Gorenflo, Joachim Wittbrodt, Jakob Gierten
In vivo modeling of congenital heart disease-candidate genes identifies MYRF with a crucial role in heart development. Disease models & mechanisms (2023)
Kaisa Pakari, Joachim Wittbrodt, Thomas Thumberger
De novo PAM generation to reach initially inaccessible target sites for base editing. Development (Cambridge, England) 150 (2) (2023)
Jakob Gierten, Bettina Welz, Tomas Fitzgerald, Thomas Thumberger, Oliver Hummel, Adrien Leger, Philipp Weber, David Hassel, Norbert Hübner, Ewan Birney, Joachim Wittbrodt
Natural genetic variation quantitatively regulates heart-rate and -dimension. bioRxiv : the preprint server for biology (2023)
Kaisa Pakari, Joachim Wittbrodt, Thomas Thumberger
De novo PAM generation to reach initially inaccessible target sites for base editing. Development (Cambridge, England) 150 (2) (2023)
Lino Doering, Alex Cornean, Thomas Thumberger, Joergen Benjaminsen, Beate Wittbrodt, Tanja Kellner, Omar T Hammouda, Matthias Gorenflo, Joachim Wittbrodt, Jakob Gierten
CRISPR-based knockout and base editing confirm the role of MYRF in heart development and congenital heart disease. Disease models & mechanisms 16 (8) (2023)
Ann Kathrin Heilig, Ryohei Nakamura, Atsuko Shimada, Yuka Hashimoto, Yuta Nakamura, Joachim Wittbrodt, Hiroyuki Takeda, Toru Kawanishi
Wnt11 acts on dermomyotome cells to guide epaxial myotome morphogenesis. eLife 11 (2022)
Thomas Thumberger, Tinatini Tavhelidse-Suck, Jose Arturo Gutierrez-Triana, Alex Cornean, Rebekka Medert, Bettina Welz, Marc Freichel, Joachim Wittbrodt
Boosting targeted genome editing using the hei-tag. eLife 11 (2022)
Alex Cornean, Jakob Gierten, Bettina Welz, Juan Luis Mateo, Thomas Thumberger, Joachim Wittbrodt
Precise in vivo functional analysis of DNA variants with base editing using ACEofBASEs target prediction. eLife 11 (2022)
Omar T Hammouda, Meng Yue Wu, Verena Kaul, Jakob Gierten, Thomas Thumberger, Joachim Wittbrodt
In vivo identification and validation of novel potential predictors for human cardiovascular diseases. PloS one 16 (12) (2021)
Narges Aghaallaei, Advaita M Dick, Erika Tsingos, Daigo Inoue, Eva Hasel, Thomas Thumberger, Atsushi Toyoda, Maria Leptin, Joachim Wittbrodt, Baubak Bajoghli
αβ/γδ T cell lineage outcome is regulated by intrathymic cell localization and environmental signals. Science advances 7 (29) (2021)
Lucie Zilova, Venera Weinhardt, Tinatini Tavhelidse-Suck, Christina Schlagheck, Thomas Thumberger, Joachim Wittbrodt
Fish primary embryonic pluripotent cells assemble into retinal tissue mirroring in vivo early eye development. eLife 10 (2021)
Nils Wagner, Fynn Beuttenmueller, Nils Norlin, Jakob Gierten, Juan Carlos Boffi, Joachim Wittbrodt, Martin Weigert, Lars Hufnagel, Robert Prevedel, Anna Kreshuk
Deep learning-enhanced light-field imaging with continuous validation. Nature methods 18 (5) (2021)
Sevinç Jakab, Roman Sakson, Marcus Hoffmann, Valerian Grote, Clara Becker, Kaisa Pakari, Lars Beedgen, Christian Thiel, Erdmann Rapp, Thomas Ruppert, Thomas Thumberger, Joachim Wittbrodt
A patient-based medaka alg2 mutant as a model for hypo-N-glycosylation. Development (Cambridge, England) 148 (11) (2021)
Hannah V Meyer, Timothy J W Dawes, Marta Serrani, Wenjia Bai, Paweł Tokarczuk, Jiashen Cai, Antonio de Marvao, Albert Henry, R Thomas Lumbers, Jakob Gierten, Thomas Thumberger, Joachim Wittbrodt, James Simon Ware, Daniel Ruckert, Paul M Matthews, Sanjay K Prasad, Maria L Costantino, Stuart A Cook, Ewan Birney, Declan P O'Regan
Genetic and functional insights into the fractal structure of the heart. Nature 584 (7822) (2020)
Philipp D Lösel, Thomas van de Kamp, Alejandra Jayme, Alexey Ershov, Tomáš Faragó, Olaf Pichler, Nicholas Tan Jerome, Narendar Aadepu, Sabine Bremer, Suren A Chilingaryan, Michael Heethoff, Andreas Kopmann, Janes Odar, Sebastian Schmelzle, Marcus Zuber, Joachim Wittbrodt, Tilo Baumbach, Vincent Heuveline
Introducing Biomedisa as an open-source online platform for biomedical image segmentation. Nature communications 11 (1) (2020)
Jakob Gierten, Christian Pylatiuk, Omar T Hammouda, Christian Schock, Johannes Stegmaier, Joachim Wittbrodt, Jochen Gehrig, Felix Loosli
Automated high-throughput heartbeat quantification in medaka and zebrafish embryos under physiological conditions. Scientific reports 10 (1) (2020)
Omar T Hammouda, Frank Böttger, Joachim Wittbrodt, Thomas Thumberger
Swift Large-scale Examination of Directed Genome Editing. PloS one 14 (3) (2019)
Erika Tsingos, Burkhard Höckendorf, Thomas Sütterlin, Stephan Kirchmaier, Niels Grabe, Lázaro Centanin, Joachim Wittbrodt
Retinal stem cells modulate proliferative parameters to coordinate post-embryonic morphogenesis in the eye of fish. eLife 8 (2019)
Colin Q Lischik, Leonie Adelmann, Joachim Wittbrodt
Enhanced in vivo-imaging in medaka by optimized anaesthesia, fluorescent protein selection and removal of pigmentation. PloS one 14 (3) (2019)
Nils Wagner, Nils Norlin, Jakob Gierten, Gustavo de Medeiros, Bálint Balázs, Joachim Wittbrodt, Lars Hufnagel, Robert Prevedel
Instantaneous isotropic volumetric imaging of fast biological processes. Nature methods 16 (6) (2019)
Javier Vázquez-Marín, José Arturo Gutiérrez-Triana, María Almuedo-Castillo, Lorena Buono, José Luis Gómez-Skarmeta, Juan Luis Mateo, Joachim Wittbrodt, Juan Ramón Martinez-Morales
yap1b, a divergent Yap/Taz family member, cooperates with yap1 in survival and morphogenesis via common transcriptional targets. Development (Cambridge, England) 146 (13) (2019)
Jose Arturo Gutierrez-Triana, Tinatini Tavhelidse-Suck, Thomas Thumberger, Isabelle Thomas, Beate Wittbrodt, Tanja Kellner, Kerim Anlas, Erika Tsingos, Joachim Wittbrodt
Efficient single-copy HDR by 5' modified long dsDNA donors. eLife 7 (2018)
Alicia Pérez Saturnino, Katharina Lust, Joachim Wittbrodt
Notch signalling patterns retinal composition by regulating atoh7 during post-embryonic growth. Development (Cambridge, England) 145 (21) (2018)
Myriam Roussigné, Lu Wei, Erika Tsingos, Franz Kuchling, Mansour Alkobtawi, Matina Tsalavouta, Joachim Wittbrodt, Matthias Carl, Patrick Blader, Stephen W Wilson
Left/right asymmetric collective migration of parapineal cells is mediated by focal FGF signaling activity in leading cells. Proceedings of the National Academy of Sciences of the United States of America 115 (42) (2018)
Katharina Lust, Joachim Wittbrodt
Activating the regenerative potential of Müller glia cells in a regeneration-deficient retina. eLife 7 (2018)
Venera Weinhardt, Roman Shkarin, Tobias Wernet, Joachim Wittbrodt, Tilo Baumbach, Felix Loosli
Quantitative morphometric analysis of adult teleost fish by X-ray computed tomography. Scientific reports 8 (1) (2018)
Daigo Inoue, Manuel Stemmer, Thomas Thumberger, Thomas Ruppert, Felix Bärenz, Joachim Wittbrodt, Oliver J Gruss
Expression of the novel maternal centrosome assembly factor Wdr8 is required for vertebrate embryonic mitoses. Nature communications 8 (2017)
Paola Kuri, Nicole L Schieber, Thomas Thumberger, Joachim Wittbrodt, Yannick Schwab, Maria Leptin
Dynamics of in vivo ASC speck formation. The Journal of cell biology 216 (9) (2017)
María Nicolás-Pérez, Franz Kuchling, Joaquín Letelier, Rocío Polvillo, Joachim Wittbrodt, Juan Ramón Martinez-Morales
Analysis of cellular behavior and cytoskeletal dynamics reveal a constriction mechanism driving optic cup morphogenesis. eLife 5 (2016)
Jose Arturo Gutierrez-Triana, Juan Luis Mateo, David Ibberson, Soojin Ryu, Joachim Wittbrodt
iDamIDseq and iDEAR: an improved method and computational pipeline to profile chromatin-binding proteins. Development (Cambridge, England) 143 (22) (2016)
Narges Aghaallaei, Franziska Gruhl, Colin Q Schaefer, Tobias Wernet, Venera Weinhardt, Lázaro Centanin, Felix Loosli, Tilo Baumbach, Joachim Wittbrodt
Identification, visualization and clonal analysis of intestinal stem cells in fish. Development (Cambridge, England) 143 (19) (2016)
Katharina Lust, Rebecca Sinn, Alicia Pérez Saturnino, Lázaro Centanin, Joachim Wittbrodt
De novo neurogenesis by targeted expression of atoh7 to Müller glia cells. Development (Cambridge, England) 143 (11) (2016)
P Zhang, S Elabd, S Hammer, V Solozobova, H Yan, F Bartel, S Inoue, T Henrich, Joachim Wittbrodt, F Loosli, G Davidson, C Blattner
TRIM25 has a dual function in the p53/Mdm2 circuit. Oncogene 34 (46) (2015)
Thomas O Auer, Tong Xiao, Valerie Bercier, Christoph Gebhardt, Karine Duroure, Jean-Paul Concordet, Claire Wyart, Maximiliano Suster, Koichi Kawakami, Joachim Wittbrodt, Herwig Baier, Filippo Del Bene
Deletion of a kinesin I motor unmasks a mechanism of homeostatic branching control by neurotrophin-3. eLife 4 (2015)
Katharina Lust, Joachim Wittbrodt
Hold your breath! eLife 4 (2015)

Joachim Wittbrodt.css-eqlu8i{font-size:small;padding-left:4px;} (Jochen Wittbrodt, J Wittbrodt)

Publication Activity (10 Years)

Top Topics

Top Venues

Joachim Wittbrodt (Jochen Wittbrodt, J Wittbrodt)