Atsushi J Nagano

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 56

Top Topics

Transcription Factor

Arabidopsis Thaliana

Top Venues

Plant & cell physiology

Plant, cell & environment

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Hiroki Ikawa, Toshihiro Hasegawa, Etsushi Kumagai, Hitomi Wakatsuki, Yasuyo Sekiyama, Atsushi J Nagano, Tsuneo Kuwagata
Enhanced decreases in rice evapotranspiration in response to elevated atmospheric carbon dioxide under warmer environments. Plant, cell & environment 47 (9) (2024)
Chika Hosokawa, Hiroki Yagi, Shoji Segami, Atsushi J Nagano, Yasuko Koumoto, Kentaro Tamura, Yoshito Oka, Tomonao Matsushita, Tomoo Shimada
The Arabidopsis katamari2 Mutant Exhibits a Hypersensitive Seedling Arrest Response at the Phase Transition from Heterotrophic to Autotrophic Growth. Plant & cell physiology 65 (3) (2024)
Hiroki Ikawa, Toshihiro Hasegawa, Etsushi Kumagai, Hitomi Wakatsuki, Yasuyo Sekiyama, Atsushi J Nagano, Tsuneo Kuwagata
Enhanced decreases in rice evapotranspiration in response to elevated atmospheric carbon dioxide under warmer environments. Plant, cell & environment (2024)
Chika Hosokawa, Hiroki Yagi, Shoji Segami, Atsushi J Nagano, Yasuko Koumoto, Kentaro Tamura, Yoshito Oka, Tomonao Matsushita, Tomoo Shimada
The Arabidopsis katamari2 Mutant Exhibits a Hypersensitive Seedling Arrest Response at the Phase Transition from Heterotrophic to Autotrophic Growth. Plant & cell physiology 65 (3) (2024)
Suzuki Setsuko, Satoshi Narita, Ichiro Tamaki, Kyoko Sugai, Atsushi J Nagano, Tokuko Ujino-Ihara, Hidetoshi Kato, Yuji Isagi
Adaptive radiation of the Callicarpa genus in the Bonin Islands revealed through double-digest restriction site-associated DNA sequencing analysis. Ecology and evolution 14 (9) (2024)
Watanabe Yoichi, Sae Matsuzawa, Ichiro Tamaki, Atsushi J Nagano, Sang-Hun Oh
Genetic differentiation and evolution of broad-leaved evergreen shrub and tree varieties of Daphniphyllum macropodum (Daphniphyllaceae). Heredity (2023)
Tomoya Nakayama, Miki Tanikawa, Yuki Okushi, Thoma Itoh, Tsuyoshi Shimmura, Michiyo Maruyama, Taiki Yamaguchi, Akiko Matsumiya, Ai Shinomiya, Ying-Jey Guh, Junfeng Chen, Kiyoshi Naruse, Hiroshi Kudoh, Yohei Kondo, Honda Naoki, Kazuhiro Aoki, Atsushi J Nagano, Takashi Yoshimura
A transcriptional program underlying the circannual rhythms of gonadal development in medaka. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Tomoya Nakayama, Miki Tanikawa, Yuki Okushi, Thoma Itoh, Tsuyoshi Shimmura, Michiyo Maruyama, Taiki Yamaguchi, Akiko Matsumiya, Ai Shinomiya, Ying-Jey Guh, Junfeng Chen, Kiyoshi Naruse, Hiroshi Kudoh, Yohei Kondo, Honda Naoki, Kazuhiro Aoki, Atsushi J Nagano, Takashi Yoshimura
A transcriptional program underlying the circannual rhythms of gonadal development in medaka. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Tomoya Nakayama, Miki Tanikawa, Yuki Okushi, Thoma Itoh, Tsuyoshi Shimmura, Michiyo Maruyama, Taiki Yamaguchi, Akiko Matsumiya, Ai Shinomiya, Ying-Jey Guh, Junfeng Chen, Kiyoshi Naruse, Hiroshi Kudoh, Yohei Kondo, Honda Naoki, Kazuhiro Aoki, Atsushi J Nagano, Takashi Yoshimura
A transcriptional program underlying the circannual rhythms of gonadal development in medaka. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Chika Hosokawa, Hiroki Yagi, Shoji Segami, Atsushi J Nagano, Yasuko Koumoto, Kentaro Tamura, Yoshito Oka, Tomonao Matsushita, Tomoo Shimada
The Arabidopsis katamari2 Mutant Exhibits a Hypersensitive Seedling Arrest Response at the Phase Transition from Heterotrophic to Autotrophic Growth. Plant & cell physiology (2023)
Tsuyoshi Ito, Ryosuke Kimura, Hikaru Wakamori, Mikiko Tanaka, Ayumi Tezuka, Atsushi J Nagano, Yuzuru Hamada, Yoshi Kawamoto
Hybridization and its impact on the ontogenetic allometry of skulls in macaques. Evolution; international journal of organic evolution (2023)
Sotaro Honda, Ayumu Imamura, Yoshiaki Seki, Koki Chigira, Marina Iwasa, Kentaro Hayami, Tomohiro Nomura, Satoshi Ohkubo, Taiichiro Ookawa, Atsushi J Nagano, Makoto Matsuoka, Yu Tanaka, Shunsuke Adachi
Genome-wide association study of leaf photosynthesis using a high-throughput gas exchange system in rice. Photosynthesis research (2023)
Kengo Hayashi, Nobuki Kato, Khurram Bashir, Haruna Nomoto, Misuzu Nakayama, Andrea Chini, Satoshi Takahashi, Hiroaki Saito, Raku Watanabe, Yousuke Takaoka, Maho Tanaka, Atsushi J Nagano, Motoaki Seki, Roberto Solano, Minoru Ueda
Subtype-selective agonists of plant hormone co-receptor COI1-JAZs identified from the stereoisomers of coronatine. Communications biology 6 (1) (2023)
Sotaro Honda, Ayumu Imamura, Yoshiaki Seki, Koki Chigira, Marina Iwasa, Kentaro Hayami, Tomohiro Nomura, Satoshi Ohkubo, Taiichiro Ookawa, Atsushi J Nagano, Makoto Matsuoka, Yu Tanaka, Shunsuke Adachi
Genome-wide association study of leaf photosynthesis using a high-throughput gas exchange system in rice. Photosynthesis research 159 (1) (2023)
Kengo Hayashi, Nobuki Kato, Khurram Bashir, Haruna Nomoto, Misuzu Nakayama, Andrea Chini, Satoshi Takahashi, Hiroaki Saito, Raku Watanabe, Yousuke Takaoka, Maho Tanaka, Atsushi J Nagano, Motoaki Seki, Roberto Solano, Minoru Ueda
Subtype-selective agonists of plant hormone co-receptor COI1-JAZs identified from the stereoisomers of coronatine. Communications biology 6 (1) (2023)
Tomoya Nakayama, Miki Tanikawa, Yuki Okushi, Thoma Itoh, Tsuyoshi Shimmura, Michiyo Maruyama, Taiki Yamaguchi, Akiko Matsumiya, Ai Shinomiya, Ying-Jey Guh, Junfeng Chen, Kiyoshi Naruse, Hiroshi Kudoh, Yohei Kondo, Honda Naoki, Kazuhiro Aoki, Atsushi J Nagano, Takashi Yoshimura
A transcriptional program underlying the circannual rhythms of gonadal development in medaka. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Masayuki Ushio, Hiroki Saito, Motoaki Tojo, Atsushi J Nagano
An ecological network approach for detecting and validating influential organisms for rice growth. eLife 12 (2023)
Hinako Matsuda, Yumi Yamazaki, Eiko Moriyoshi, Masaru Nakayasu, Shinichi Yamazaki, Yuichi Aoki, Hisabumi Takase, Shin Okazaki, Atsushi J Nagano, Akito Kaga, Kazufumi Yazaki, Akifumi Sugiyama
Apoplast-localized β-Glucosidase Elevates Isoflavone Accumulation in the Soybean Rhizosphere. Plant & cell physiology (2023)
Sotaro Honda, Ayumu Imamura, Yoshiaki Seki, Koki Chigira, Marina Iwasa, Kentaro Hayami, Tomohiro Nomura, Satoshi Ohkubo, Taiichiro Ookawa, Atsushi J Nagano, Makoto Matsuoka, Yu Tanaka, Shunsuke Adachi
Genome-wide association study of leaf photosynthesis using a high-throughput gas exchange system in rice. Photosynthesis research 159 (1) (2023)
Tomoya Nakayama, Miki Tanikawa, Yuki Okushi, Thoma Itoh, Tsuyoshi Shimmura, Michiyo Maruyama, Taiki Yamaguchi, Akiko Matsumiya, Ai Shinomiya, Ying-Jey Guh, Junfeng Chen, Kiyoshi Naruse, Hiroshi Kudoh, Yohei Kondo, Honda Naoki, Kazuhiro Aoki, Atsushi J Nagano, Takashi Yoshimura
A transcriptional program underlying the circannual rhythms of gonadal development in medaka. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Kengo Hayashi, Nobuki Kato, Khurram Bashir, Haruna Nomoto, Misuzu Nakayama, Andrea Chini, Satoshi Takahashi, Hiroaki Saito, Raku Watanabe, Yousuke Takaoka, Maho Tanaka, Atsushi J Nagano, Motoaki Seki, Roberto Solano, Minoru Ueda
Subtype-selective agonists of plant hormone co-receptor COI1-JAZs identified from the stereoisomers of coronatine. Communications biology 6 (1) (2023)
Maya Matsunami, Mari Murai-Hatano, Tsuneo Kuwagata, Uzuki Matsushima, Yoichi Hashida, Yoko Tominaga, Yusuke Masuya, Atsushi J Nagano
Transcriptome dynamics of rice in natura: Response of above and below ground organs to microclimate. Plant, cell & environment (2022)
Bright Gyamfi Adu, Aizelle Y S Argete, Sakiko Egawa, Atsushi J Nagano, Akifumi Shimizu, Yoshihiro Ohmori, Toru Fujiwara
A Koshihikari X Oryza rufipogon Introgression Line with a High Capacity to Take up Nitrogen to Maintain Growth and Panicle Development under Low Nitrogen Conditions. Plant & cell physiology 63 (9) (2022)
Kanako Chimura, Shingo Akita, Takaya Iwasaki, Atsushi J Nagano, Satoshi Shimada
Phylogeography of a canopy-forming kelp, Eisenia bicyclis (Laminariales, Phaeophyceae), based on a genome-wide sequencing analysis. Journal of phycology 58 (2) (2022)
Satoshi Ansai, Javier Montenegro, Kawilarang W A Masengi, Atsushi J Nagano, Kazunori Yamahira, Jun Kitano
Diversity of sex chromosomes in Sulawesian medaka fishes. Journal of evolutionary biology 35 (12) (2022)
Yu Okamura, Ai Sato, Lina Kawaguchi, Atsushi J Nagano, Masashi Murakami, Heiko Vogel, Juergen Kroymann
Microevolution of Pieris butterfly genes involved in host plant adaptation along a host plant community cline. Molecular ecology 31 (11) (2022)
Yoichi Hashida, Ayumi Tezuka, Yasuyuki Nomura, Mari Kamitani, Makoto Kashima, Yuko Kurita, Atsushi J Nagano
Fillable and unfillable gaps in plant transcriptome under field and controlled environments. Plant, cell & environment 45 (8) (2022)
Khurram Bashir, Daisuke Todaka, Sultana Rasheed, Akihiro Matsui, Zarnab Ahmad, Kaori Sako, Yoshinori Utsumi, Anh Thu Vu, Maho Tanaka, Satoshi Takahashi, Junko Ishida, Yuuri Tsuboi, Shunsuke Watanabe, Yuri Kanno, Eigo Ando, Kwang-Chul Shin, Makoto Seito, Hinata Motegi, Muneo Sato, Rui Li, Saya Kikuchi, Miki Fujita, Miyako Kusano, Makoto Kobayashi, Yoshiki Habu, Atsushi J Nagano, Kanako Kawaura, Jun Kikuchi, Kazuki Saito, Masami Yokota Hirai, Mitsunori Seo, Kazuo Shinozaki, Toshinori Kinoshita, Motoaki Seki
Ethanol-Mediated Novel Survival Strategy against Drought Stress in Plants. Plant & cell physiology 63 (9) (2022)
Sota Koeda, Namiko Mori, Ryo Horiuchi, Chiho Watanabe, Atsushi J Nagano, Hayato Shiragane
PepYLCIV and PepYLCAV resistance gene Pepy-2 encodes DFDGD-Class RNA-dependent RNA polymerase in Capsicum. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 135 (7) (2022)
Javier Montenegro, Shingo Fujimoto, Satoshi Ansai, Atsushi J Nagano, Masahiro Sato, Yusuke Maeda, Rieko Tanaka, Kawilarang W A Masengi, Ryosuke Kimura, Jun Kitano, Kazunori Yamahira
Genetic basis for the evolution of pelvic-fin brooding, a new mode of reproduction, in a Sulawesian fish. Molecular ecology 31 (14) (2022)
Taro Maeda, Shigeo S Sugano, Makoto Shirakawa, Mayu Sagara, Toshiro Ito, Satoshi Kondo, Atsushi J Nagano
Single-cell RNA Sequencing of Arabidopsis Leaf Tissues Identifies Multiple Specialized Cell Types: Idioblast Myrosin Cells and Potential Glucosinolate-producing Cells. Plant & cell physiology (2022)
Yuko Kurita, Satomi Kanno, Ryohei Sugita, Atsushi Hirose, Miwa Ohnishi, Ayumi Tezuka, Ayumi Deguchi, Kimitsune Ishizaki, Hidehiro Fukaki, Kei'ichi Baba, Atsushi J Nagano, Keitaro Tanoi, Tomoko M Nakanishi, Tetsuro Mimura
Visualization of phosphorus re-translocation and phosphate transporter expression profiles in a shortened annual cycle system of poplar. Plant, cell & environment 45 (6) (2022)
Sota Koeda, Mika Onouchi, Namiko Mori, Nadya Syafira Pohan, Atsushi J Nagano, Elly Kesumawati
A recessive gene pepy-1 encoding Pelota confers resistance to begomovirus isolates of PepYLCIV and PepYLCAV in Capsicum annuum. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 134 (9) (2021)
Ryuuta Kyan, Takuma Kimura, Tadashi Yamashiro, Shinji Fujii, Shota Sakaguchi, Motomi Ito, Atsushi J Nagano, Hiroshi Kudoh, Masayuki Maki
Phylogeographic and demographic modeling analyses of the multiple origins of the rheophytic goldenrod Solidago yokusaiana Makino. Heredity 126 (5) (2021)
Satoshi Ansai, Koji Mochida, Shingo Fujimoto, Daniel F Mokodongan, Bayu Kreshna Adhitya Sumarto, Kawilarang W A Masengi, Renny K Hadiaty, Atsushi J Nagano, Atsushi Toyoda, Kiyoshi Naruse, Kazunori Yamahira, Jun Kitano
Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes. Nature communications 12 (1) (2021)
Watanabe Yoichi, Minami Takahashi, Atsushi J Nagano, Koichi Uehara, Harue Abe
Evolutionary effects of geographic and climatic isolation between Rhododendron tsusiophyllum populations on the Izu Islands and mainland Honshu of Japan. Heredity 126 (5) (2021)
Nobutoshi Yamaguchi, Satoshi Matsubara, Kaori Yoshimizu, Motohide Seki, Kouta Hamada, Mari Kamitani, Yuko Kurita, Yasuyuki Nomura, Kota Nagashima, Soichi Inagaki, Takamasa Suzuki, Eng-Seng Gan, Taiko Kim To, Tetsuji Kakutani, Atsushi J Nagano, Akiko Satake, Toshiro Ito
H3K27me3 demethylases alter HSP22 and HSP17.6C expression in response to recurring heat in Arabidopsis. Nature communications 12 (1) (2021)
Yasuhiro Sato, Eiji Yamamoto, Kentaro K Shimizu, Atsushi J Nagano
Neighbor GWAS: incorporating neighbor genotypic identity into genome-wide association studies of field herbivory. Heredity 126 (4) (2021)
Makoto Kashima, Ryota L Sakamoto, Hiroki Saito, Satoshi Ohkubo, Ayumi Tezuka, Ayumi Deguchi, Yoichi Hashida, Yuko Kurita, Koji Iwayama, Shunsuke Adachi, Atsushi J Nagano
Genomic Basis of Transcriptome Dynamics in Rice under Field Conditions. Plant & cell physiology 62 (9) (2021)
Shota Sakaguchi, Yui Asaoka, Daiki Takahashi, Yuji Isagi, Ryosuke Imai, Atsushi J Nagano, Ying-Xiong Qiu, Pan Li, Ruisen Lu, Hiroaki Setoguchi
Inferring historical survivals of climate relicts: the effects of climate changes, geography, and population-specific factors on herbaceous hydrangeas. Heredity 126 (4) (2021)
José Said Gutiérrez-Ortega, Francisco Molina-Freaner, José F Martínez, Miguel Ángel Pérez-Farrera, Andrew P Vovides, Antonio Hernández-López, Ayumi Tezuka, Atsushi J Nagano, Yasuyuki Watano, Yuma Takahashi, Masashi Murakami, Tadashi Kajita
Speciation along a latitudinal gradient: The origin of the Neotropical cycad sister pair Dioon sonorense-D. vovidesii (Zamiaceae). Ecology and evolution 11 (11) (2021)
Tomoyuki Kokita, Kohtaro Ueno, Yo Y Yamasaki, Masanari Matsuda, Ryoichi Tabata, Atsushi J Nagano, Tappei Mishina, Katsutoshi Watanabe
Gudgeon fish with and without genetically determined countershading coexist in heterogeneous littoral environments of an ancient lake. Ecology and evolution 11 (19) (2021)
Yoshiaki Ueda, Namie Ohtsuki, Koji Kadota, Ayumi Tezuka, Atsushi J Nagano, Taro Kadowaki, Yonghyun Kim, Mitsue Miyao, Shuichi Yanagisawa
Gene regulatory network and its constituent transcription factors that control nitrogen-deficiency responses in rice. The New phytologist 227 (5) (2020)
José Said Gutiérrez-Ortega, María Magdalena Salinas-Rodríguez, Takuro Ito, Miguel Ángel Pérez-Farrera, Andrew P Vovides, José F Martínez, Francisco Molina-Freaner, Antonio Hernández-López, Lina Kawaguchi, Atsushi J Nagano, Tadashi Kajita, Yasuyuki Watano, Takashi Tsuchimatsu, Yuma Takahashi, Masashi Murakami
Niche conservatism promotes speciation in cycads: the case of Dioon merolae (Zamiaceae) in Mexico. The New phytologist 227 (6) (2020)
Haruki Nishio, Atsushi J Nagano, Tasuku Ito, Yutaka Suzuki, Hiroshi Kudoh
Seasonal plasticity and diel stability of H3K27me3 in natural fluctuating environments. Nature plants 6 (9) (2020)
Kenji Yamada, Shino Goto-Yamada, Akiko Nakazaki, Tadashi Kunieda, Keiko Kuwata, Atsushi J Nagano, Mikio Nishimura, Ikuko Hara-Nishimura
Endoplasmic reticulum-derived bodies enable a single-cell chemical defense in Brassicaceae plants. Communications biology 3 (1) (2020)
Yasuhiro Sato, Rie Shimizu-Inatsugi, Misako Yamazaki, Kentaro K Shimizu, Atsushi J Nagano
Plant trichomes and a single gene GLABRA1 contribute to insect community composition on field-grown Arabidopsis thaliana. BMC plant biology 19 (1) (2019)
Mie N Honjo, Naoko Emura, Tetsuhiro Kawagoe, Jiro Sugisaka, Mari Kamitani, Atsushi J Nagano, Hiroshi Kudoh
Seasonality of interactions between a plant virus and its host during persistent infection in a natural environment. The ISME journal 14 (2) (2019)
Yohei Koide, Shuntaro Sakaguchi, Takashi Uchiyama, Yuya Ota, Ayumi Tezuka, Atsushi J Nagano, Seiya Ishiguro, Itsuro Takamure, Yuji Kishima
Genetic Properties Responsible for the Transgressive Segregation of Days to Heading in Rice. G3 (Bethesda, Md.) 9 (5) (2019)
Hiroto Yamashita, Hideyuki Katai, Lina Kawaguchi, Atsushi J Nagano, Yoriyuki Nakamura, Akio Morita, Takashi Ikka
Analyses of single nucleotide polymorphisms identified by ddRAD-seq reveal genetic structure of tea germplasm and Japanese landraces for tea breeding. PloS one 14 (8) (2019)
Asano Ishikawa, Naoki Kabeya, Koki Ikeya, Ryo Kakioka, Jennifer N Cech, Naoki Osada, Miguel C Leal, Jun Inoue, Manabu Kume, Atsushi Toyoda, Ayumi Tezuka, Atsushi J Nagano, Yo Y Yamasaki, Yuto Suzuki, Tomoyuki Kokita, Hiroshi Takahashi, Kay Lucek, David Alexander Marques, Yusuke Takehana, Kiyoshi Naruse, Seiichi Mori, Oscar Monroig, S Nemiah Ladd, Carsten J Schubert, Blake Matthews, Catherine L Peichel, Ole Seehausen, Goro Yoshizaki, Jun Kitano
A key metabolic gene for recurrent freshwater colonization and radiation in fishes. Science (New York, N.Y.) 364 (6443) (2019)
Shotaro Hirase, Tomoyuki Kokita, Atsushi J Nagano, Kiyoshi Kikuchi
Genomic and phenotypic consequences of two independent secondary contact zones between allopatric lineages of the anadromous ice goby Leucopsarion petersii. Heredity 124 (1) (2019)
Atsushi J Nagano, Tetsuhiro Kawagoe, Jiro Sugisaka, Mie N Honjo, Koji Iwayama, Hiroshi Kudoh
Annual transcriptome dynamics in natural environments reveals plant seasonal adaptation. Nature plants 5 (1) (2019)
Sota Koeda, Kosuke Sato, Hiroki Saito, Atsushi J Nagano, Masaki Yasugi, Hiroshi Kudoh, Yoshiyuki Tanaka
Mutation in the putative ketoacyl-ACP reductase CaKR1 induces loss of pungency in Capsicum. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 132 (1) (2018)
Shinnosuke Kagiya, Masaki Yasugi, Hiroshi Kudoh, Atsushi J Nagano, Shunsuke Utsumi
Does genomic variation in a foundation species predict arthropod community structure in a riparian forest? Molecular ecology 27 (5) (2018)
Akinori Awazu, Takahiro Tanabe, Mari Kamitani, Ayumi Tezuka, Atsushi J Nagano
Broad distribution spectrum from Gaussian to power law appears in stochastic variations in RNA-seq data. Scientific reports 8 (1) (2018)