Michael I Love

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 56

Top Venues

bioRxiv : the preprint server for biology

Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology

F1000Research

Nature methods

University of North Carolina at Chapel Hill

Stanford University (MSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of North Carolina at Chapel Hill

United States

Assistant Professor :: Biostatistics, Genetics

Harvard TH Chan School of Public Health

United States

Postdoctoral Fellow :: Biostatistics

Dana Farber Cancer Institute

United States

Postdoctoral Fellow :: Biostatistics and Computational Biology

Education History

Stanford University

United States

MSC :: Statistics

Stanford University

United States

BSC :: Mathematics

Publications

Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors with Mutational Signatures. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 33 (5) (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede C A da Conceição, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: enhancing omic data analyses. Nature methods 21 (7) (2024)
Nicole E Kramer, Philip R Coryell, Susan D'Costa, Eliza Thulson, Seyoun Byun, HyunAh Kim, Sylvie M Parkus, Marielle L Bond, Jacqueline Yalin S Shin Sahin, Susanna Chubinskaya, Michael I Love, Karen L Mohlke, Brian O Diekman, Richard F Loeser, Douglas H Phanstiel
Response eQTLs, chromatin accessibility, and 3D chromatin structure in chondrocytes provide mechanistic insight into osteoarthritis risk. bioRxiv : the preprint server for biology (2024)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors With Mutational Signatures. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2024)
Nicole E Kramer, Philip R Coryell, Susan D'Costa, Eliza Thulson, Seyoun Byun, HyunAh Kim, Sylvie M Parkus, Marielle L Bond, Jacqueline Yalin S Shin Sahin, Susanna Chubinskaya, Michael I Love, Karen L Mohlke, Brian O Diekman, Richard F Loeser, Douglas H Phanstiel
Response eQTLs, chromatin accessibility, and 3D chromatin structure in chondrocytes provide mechanistic insight into osteoarthritis risk. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede C A da Conceição, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: enhancing omic data analyses. Nature methods (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors With Mutational Signatures. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede C A da Conceição, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: enhancing omic data analyses. Nature methods (2024)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors with Mutational Signatures. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 33 (5) (2024)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors With Mutational Signatures. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede C A da Conceição, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: enhancing omic data analyses. Nature methods 21 (7) (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors with Mutational Signatures. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 33 (5) (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors With Mutational Signatures. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2024)
Ying Chen, Andre D Sim, Yuk Kei Wan, Keith Yeo, Joseph Jing Xian Lee, Min Hao Ling, Michael I Love, Jonathan Goke
Context-aware transcript quantification from long-read RNA-seq data with Bambu. Nature methods (2023)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors With Mutational Signatures. bioRxiv : the preprint server for biology (2023)
Alina M Hamilton, Sarah C Van Alsten, Xiaohua Gao, Joseph S Nsonwu-Farley, Benjamin C Calhoun, Michael I Love, Melissa A Troester, Katherine A Hoadley
Incorporating RNA-based Risk Scores for Genomic Instability to Predict Breast Cancer Recurrence and Immunogenicity in a Diverse Population. Cancer research communications 3 (1) (2023)
Marielle L Bond, Eric S Davis, Ivana Yoseli Quiroga-Barber, Anubha Dey, Manjari Kiran, Michael I Love, Hyejung Won, Douglas H Phanstiel
Chromatin loop dynamics during cellular differentiation are associated with changes to both anchor and internal regulatory features. Genome research (2023)
Noor Pratap Singh, Euphy Y Wu, Jason Fan, Michael I Love, Rob Patro
Tree-based differential testing using inferential uncertainty for RNA-Seq. bioRxiv : the preprint server for biology (2023)
Noor Pratap Singh, Euphy Y Wu, Jason Fan, Michael I Love, Rob Patro
Tree-based differential testing using inferential uncertainty for RNA-Seq. bioRxiv : the preprint server for biology (2023)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors With Mutational Signatures. bioRxiv : the preprint server for biology (2023)
Euphy Y Wu, Noor P Singh, Kwangbom Choi, Mohsen Zakeri, Matthew Vincent, Gary A Churchill, Cheryl L Ackert-Bicknell, Rob Patro, Michael I Love
SEESAW: detecting isoform-level allelic imbalance accounting for inferential uncertainty. Genome biology 24 (1) (2023)
Noor Pratap Singh, Euphy Y Wu, Jason Fan, Michael I Love, Rob Patro
Tree-based differential testing using inferential uncertainty for RNA-Seq. bioRxiv : the preprint server for biology (2023)
Ji-Eun Park, Markia A Smith, Sarah C Van Alsten, Andrea Walens, Di Wu, Katherine A Hoadley, Melissa A Troester, Michael I Love
Diffsig: Associating Risk Factors With Mutational Signatures. bioRxiv : the preprint server for biology (2023)
Noor Pratap Singh, Euphy Y Wu, Jason Fan, Michael I Love, Rob Patro
Tree-based differential testing using inferential uncertainty for RNA-Seq. bioRxiv : the preprint server for biology (2023)
Alina M Hamilton, Sarah C Van Alsten, Xiaohua Gao, Joseph S Nsonwu-Farley, Benjamin C Calhoun, Michael I Love, Melissa A Troester, Katherine A Hoadley
Incorporating RNA-based Risk Scores for Genomic Instability to Predict Breast Cancer Recurrence and Immunogenicity in a Diverse Population. Cancer research communications 3 (1) (2023)
Eric S Davis, Wancen Mu, Stuart Lee, Mikhail G Dozmorov, Michael I Love, Douglas H Phanstiel
matchRanges: generating null hypothesis genomic ranges via covariate-matched sampling. Bioinformatics (Oxford, England) 39 (5) (2023)
Eric S Davis, Wancen Mu, Stuart Lee, Mikhail G Dozmorov, Michael I Love, Douglas H Phanstiel
matchRanges: generating null hypothesis genomic ranges via covariate-matched sampling. Bioinformatics (Oxford, England) 39 (5) (2023)
Andrea Walens, Sarah C Van Alsten, Linnea T Olsson, Markia A Smith, Alexandre G Lockhart, Xiaohua Gao, Alina M Hamilton, Erin L Kirk, Michael I Love, Gaorav P Gupta, Charles M Perou, Cyrus Vaziri, Katherine A Hoadley, Melissa A Troester
RNA-Based Classification of Homologous Recombination Deficiency in Racially Diverse Patients with Breast Cancer. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 31 (12) (2022)
Mikhail G Dozmorov, Wancen Mu, Eric S Davis, Stuart Lee, Timothy J Triche, Douglas H Phanstiel, Michael I Love
CTCF: an R/bioconductor data package of human and mouse CTCF binding sites. Bioinformatics advances 2 (1) (2022)
Mikhail G Dozmorov, Wancen Mu, Eric S Davis, Stuart Lee, Timothy J Triche, Douglas H Phanstiel, Michael I Love
CTCF: an R/bioconductor data package of human and mouse CTCF binding sites. Bioinformatics advances 2 (1) (2022)
Wancen Mu, Hirak Sarkar, Avi Srivastava, Kwangbom Choi, Rob Patro, Michael I Love
Airpart: interpretable statistical models for analyzing allelic imbalance in single-cell datasets. Bioinformatics (Oxford, England) 38 (10) (2022)
Hannah J Perrin, Kevin W Currin, Swarooparani Vadlamudi, Gautam Kumar Pandey, Kenneth K Ng, Martin Wabitsch, Markku Laakso, Michael I Love, Karen L Mohlke
Chromatin accessibility and gene expression during adipocyte differentiation identify context-dependent effects at cardiometabolic GWAS loci. PLoS genetics 17 (10) (2021)
Achal Patel, Montserrat Garcia-Closas, Andrew F Olshan, Charles M Perou, Melissa A Troester, Michael I Love, Arjun Bhattacharya
Gene level germline contributions to clinical risk of recurrence scores in Black and White breast cancer patients. Cancer research (2021)
Anushka Rajesh, Yutong Chang, Malak S Abedalthagafi, Annie Wong-Beringer, Michael I Love, Serghei Mangul
Improving the completeness of public metadata accompanying omics studies. Genome biology 22 (1) (2021)
Arjun Bhattacharya, Alina M Hamilton, Helena Furberg, Eugene Pietzak, Mark P Purdue, Melissa A Troester, Katherine A Hoadley, Michael I Love
An approach for normalization and quality control for NanoString RNA expression data. Briefings in bioinformatics 22 (3) (2021)
Anqi Zhu, Nana Matoba, Emma P Wilson, Amanda L Tapia, Yun Li, Joseph G Ibrahim, Jason L Stein, Michael I Love
MRLocus: Identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity. PLoS genetics 17 (4) (2021)
Arjun Bhattacharya, Yun Li, Michael I Love
MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies. PLoS genetics 17 (3) (2021)
Amber N Hurson, Mustapha Abubakar, Alina M Hamilton, Kathleen Conway, Katherine A Hoadley, Michael I Love, Andrew F Olshan, Charles M Perou, Montserrat Garcia-Closas, Melissa A Troester
TP53 Pathway Function, Estrogen Receptor Status, and Breast Cancer Risk Factors in the Carolina Breast Cancer Study. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2021)
Sanah N Vohra, Andrea Walens, Alina M Hamilton, Mark E Sherman, Pepper J Schedin, Hazel B Nichols, Katherine E Reeder-Hayes, Andrew F Olshan, Michael I Love, Melissa A Troester
Molecular and clinical characterization of postpartum-associated breast cancer in the Carolina Breast Cancer Study Phase I-III, 1993-2013. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2021)
Michael I Love, Charlotte Soneson, Peter F Hickey, Lisa K Johnson, N Tessa Pierce, Lori Shepherd, Martin Morgan, Rob Patro
Tximeta: Reference sequence checksums for provenance identification in RNA-seq. PLoS computational biology 16 (2) (2020)
Charlotte Soneson, Federico Marini, Florian Geier, Michael I Love, Michael B Stadler
ExploreModelMatrix: Interactive exploration for improved understanding of design matrices and linear models in R. F1000Research (2020)
Charlotte Soneson, Federico Marini, Florian Geier, Michael I Love, Michael B Stadler
ExploreModelMatrix: Interactive exploration for improved understanding of design matrices and linear models in R. F1000Research 9 (2020)
Sarah A Reifeis, Michael G Hudgens, Mete Civelek, Karen L Mohlke, Michael I Love
Assessing exposure effects on gene expression. Genetic epidemiology 44 (6) (2020)
Arjun Bhattacharya, Montserrat García-Closas, Andrew F Olshan, Charles M Perou, Melissa A Troester, Michael I Love
A framework for transcriptome-wide association studies in breast cancer in diverse study populations. Genome biology 21 (1) (2020)
Joshua P Zitovsky, Michael I Love
Fast effect size shrinkage software for beta-binomial models of allelic imbalance. F1000Research 8 (2019)
Charlotte Soneson, Michael I Love, Rob Patro, Shobbir Hussain, Dheeraj Malhotra, Mark D Robinson
A junction coverage compatibility score to quantify the reliability of transcript abundance estimates and annotation catalogs. Life science alliance 2 (1) (2019)
Joshua P Zitovsky, Michael I Love
Fast effect size shrinkage software for beta-binomial models of allelic imbalance. F1000Research 8 (2019)
Michael I Love, Charlotte Soneson, Rob Patro
Swimming downstream: statistical analysis of differential transcript usage following Salmon quantification. F1000Research (2018)
Michael I Love, Charlotte Soneson, Rob Patro
Swimming downstream: statistical analysis of differential transcript usage following Salmon quantification. F1000Research (2018)
Michael I Love, Charlotte Soneson, Rob Patro
Swimming downstream: statistical analysis of differential transcript usage following Salmon quantification. F1000Research 7 (2018)
Michael I Love, John B Hogenesch, Rafael A Irizarry
Modeling of RNA-seq fragment sequence bias reduces systematic errors in transcript abundance estimation. Nature biotechnology 34 (12) (2016)
Wolfgang Huber, Vincent J Carey, Robert Gentleman, Simon Anders, Marc Carlson, Benilton S Carvalho, Hector Corrada Bravo, Sean Davis, Laurent Gatto, Thomas Girke, Raphael Gottardo, Florian Hahne, Kasper D Hansen, Rafael A Irizarry, Michael Lawrence, Michael I Love, James MacDonald, Valerie Obenchain, Andrzej K Oleś, Hervé Pagès, Alejandro Reyes, Paul Shannon, Gordon K Smyth, Dan Tenenbaum, Levi Waldron, Martin Morgan
Orchestrating high-throughput genomic analysis with Bioconductor. Nature methods 12 (2) (2015)

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Publication Activity (10 Years)

Top Topics

Top Venues

Michael I Love