Basile I M Wicky (B I M Wicky)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 18

Top Topics

Bacillus Subtilis

Top Venues

Journal of the American Chemical Society

Science (New York, N.Y.)

bioRxiv : the preprint server for biology

Nature biotechnology

This page only lists publications with an associated author ORCID identifier.

Publications

Kiera H Sumida, Reyes Núñez-Franco, Indrek Kalvet, Samuel J Pellock, Basile I M Wicky, Lukas F Milles, Justas Dauparas, Jue Wang, Yakov Kipnis, Noel Jameson, Alex Kang, Joshmyn De La Cruz, Banumathi Sankaran, Asim K Bera, Gonzalo Jiménez-Osés, David Baker
Improving Protein Expression, Stability, and Function with ProteinMPNN. Journal of the American Chemical Society 146 (3) (2024)
Kiera H Sumida, Reyes Núñez-Franco, Indrek Kalvet, Samuel J Pellock, Basile I M Wicky, Lukas F Milles, Justas Dauparas, Jue Wang, Yakov Kipnis, Noel Jameson, Alex Kang, Joshmyn De La Cruz, Banumathi Sankaran, Asim K Bera, Gonzalo Jiménez-Osés, David Baker
Improving Protein Expression, Stability, and Function with ProteinMPNN. Journal of the American Chemical Society 146 (3) (2024)
Kiera H Sumida, Reyes Núñez-Franco, Indrek Kalvet, Samuel J Pellock, Basile I M Wicky, Lukas F Milles, Justas Dauparas, Jue Wang, Yakov Kipnis, Noel Jameson, Alex Kang, Joshmyn De La Cruz, Banumathi Sankaran, Asim K Bera, Gonzalo Jiménez-Osés, David Baker
Improving Protein Expression, Stability, and Function with ProteinMPNN. Journal of the American Chemical Society (2024)
Kiera H Sumida, Reyes Núñez-Franco, Indrek Kalvet, Samuel J Pellock, Basile I M Wicky, Lukas F Milles, Justas Dauparas, Jue Wang, Yakov Kipnis, Noel Jameson, Alex Kang, Joshmyn De La Cruz, Banumathi Sankaran, Asim K Bera, Gonzalo Jiménez-Osés, David Baker
Improving Protein Expression, Stability, and Function with ProteinMPNN. Journal of the American Chemical Society 146 (3) (2024)
Kiera H Sumida, Reyes Núñez-Franco, Indrek Kalvet, Samuel J Pellock, Basile I M Wicky, Lukas F Milles, Justas Dauparas, Jue Wang, Yakov Kipnis, Noel Jameson, Alex Kang, Joshmyn De La Cruz, Banumathi Sankaran, Asim K Bera, Gonzalo Jiménez-Osés, David Baker
Improving Protein Expression, Stability, and Function with ProteinMPNN. Journal of the American Chemical Society 146 (3) (2024)
Kiera H Sumida, Reyes Núñez-Franco, Indrek Kalvet, Samuel J Pellock, Basile I M Wicky, Lukas F Milles, Justas Dauparas, Jue Wang, Yakov Kipnis, Noel Jameson, Alex Kang, Joshmyn De La Cruz, Banumathi Sankaran, Asim K Bera, Gonzalo Jiménez-Osés, David Baker
Improving Protein Expression, Stability, and Function with ProteinMPNN. Journal of the American Chemical Society 146 (3) (2024)
Kiera H Sumida, Reyes Núñez-Franco, Indrek Kalvet, Samuel J Pellock, Basile I M Wicky, Lukas F Milles, Justas Dauparas, Jue Wang, Yakov Kipnis, Noel Jameson, Alex Kang, Joshmyn De La Cruz, Banumathi Sankaran, Asim K Bera, Gonzalo Jiménez-Osés, David Baker
Improving Protein Expression, Stability, and Function with ProteinMPNN. Journal of the American Chemical Society 146 (3) (2024)
Joseph L Watson, David Juergens, Nathaniel R Bennett, Brian L Trippe, Jason Yim, Helen E Eisenach, Woody Ahern, Andrew J Borst, Robert J Ragotte, Lukas F Milles, Basile I M Wicky, Nikita Hanikel, Samuel J Pellock, Alexis Courbet, William Sheffler, Jue Wang, Preetham Venkatesh, Isaac Sappington, Susana Vázquez Torres, Anna Lauko, Valentin De Bortoli, Emile Mathieu, Sergey Ovchinnikov, Regina Barzilay, Tommi S Jaakkola, Frank DiMaio, Minkyung Baek, Julien S Baker
De novo design of protein structure and function with RFdiffusion. Nature (2023)
Ryan D Kibler, Sangmin Lee, Madison A Kennedy, Basile I M Wicky, Stella M Lai, Marius M Kostelic, Xinting Li, Cameron M Chow, Lauren Carter, Vicki H Wysocki, Barry L Stoddard, Julien S Baker
Stepwise design of pseudosymmetric protein hetero-oligomers. bioRxiv : the preprint server for biology (2023)
Linna An, Derrick R Hicks, Dmitri Zorine, Justas Dauparas, Basile I M Wicky, Lukas F Milles, Alexis Courbet, Asim K Bera, Hannah Nguyen, Alex Kang, Lauren Carter, Julien S Baker
Hallucination of closed repeat proteins containing central pockets. Nature structural & molecular biology (2023)
Danny D Sahtoe, Florian Praetorius, Alexis Courbet, Yang Hsia, Basile I M Wicky, Natasha I Edman, Lauren M Miller, Bart J R Timmermans, Justin Decarreau, Hana M Morris, Alex Kang, Asim K Bera, Julien S Baker
Reconfigurable asymmetric protein assemblies through implicit negative design. Science (New York, N.Y.) 375 (6578) (2022)
Jason Z Zhang, Andy Hsien-Wei Yeh, Alexandra C Walls, Basile I M Wicky, Kaitlin R Sprouse, Laura A VanBlargan, Rebecca Treger, Alfredo Quijano-Rubio, Minh N Pham, John C Kraft, Ian C Haydon, Wei Yang, Michelle DeWitt, John E Bowen, Cameron M Chow, Lauren Carter, Rashmi Ravichandran, Mark H Wener, Lance J Stewart, David J Veesler, Michael S. Diamond, Alexander L Greninger, David M Koelle, Julien S Baker
Thermodynamically coupled biosensors for detecting neutralizing antibodies against SARS-CoV-2 variants. Nature biotechnology 40 (9) (2022)
Basile I M Wicky, Lukas F Milles, Alexis Courbet, Robert J Ragotte, Justas Dauparas, E Kinfu, S Tipps, Ryan D Kibler, Minkyung Baek, Frank Dimaio, Xinting Li, Lauren Carter, Alex Kang, Hannah Nguyen, Asim K Bera, Julien S Baker
Hallucinating symmetric protein assemblies. Science (New York, N.Y.) 378 (6615) (2022)
Jue Wang, Sidney Lisanza, David C Juergens, Doug K Tischer, Joseph L Watson, Karla M Castro, Robert J Ragotte, Amijai Saragovi, Lukas F Milles, Minkyung Baek, David Baker, Wei Yang, Derrick R Hicks, Marc Expòsit, Thomas Schlichthaerle, Jung-Ho Chun, Justas Dauparas, Nathaniel R Bennett, Basile I M Wicky, Andrew Muenks, Frank Dimaio, Bruno E Correia, Sergey Ovchinnikov, Julien S Baker
Scaffolding protein functional sites using deep learning. Science (New York, N.Y.) 377 (6604) (2022)
Justas Dauparas, David Baker, Nathaniel R Bennett, Hua Bai, Robert J Ragotte, Lukas F Milles, Basile I M Wicky, Alexis Courbet, Robbert J de Haas, Neville P Bethel, P J Y Leung, Timothy F Huddy, S Pellock, Doug K Tischer, F Chan, B Koepnick, Hannah Nguyen, Alex Kang, Banumathi Sankaran, Asim K Bera, Neil P King, Julien S Baker
Robust deep learning-based protein sequence design using ProteinMPNN. Science (New York, N.Y.) 378 (6615) (2022)
Jason Z Zhang, Andy Hsien-Wei Yeh, Alexandra C Walls, Basile I M Wicky, Kaiti Sprouse, Laura A VanBlargan, Rebecca Treger, Alfredo Quijano-Rubio, Minh N Pham, John C Kraft, Ian C Haydon, Wei Yang, Michelle DeWitt, Cameron Chow, Lauren Carter, Mark H Wener, Lance Stewart, David Veesler, Michael S Diamond, David Baker
Detection of antibodies neutralizing historical and emerging SARS-CoV-2 strains using a thermodynamically coupled de novo biosensor system. bioRxiv : the preprint server for biology (2021)
Christoffer H Norn, Basile I M Wicky, David Juergens, Sirui Liu, David Kim, Doug Tischer, Brian Koepnick, David Baker, null null, Julien S Baker, Sergey Ovchinnikov
Protein sequence design by conformational landscape optimization. Proceedings of the National Academy of Sciences of the United States of America 118 (11) (2021)
Zibo Chen, Ryan D Kibler, Andrew C Hunt, Florian Busch, Jocelynn Pearl, Mengxuan Jia, Zachary L VanAernum, Basile I M Wicky, Galen Dods, Hanna Liao, Matthew S Wilken, Christie Ciarlo, Shon Green, Hana El-Samad, John A Stamatoyannopoulos, Vicki H Wysocki, Michael C Jewett, Scott E Boyken, Julien S Baker
De novo design of protein logic gates. Science (New York, N.Y.) 368 (6486) (2020)