Alex Kang (A Kang)

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 34

Top Topics

Protein Protein

Top Venues

Science (New York, N.Y.)

Proceedings of the National Academy of Sciences of the United States of America

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Robbert J de Haas, Natalie Brunette, Alexander D Goodson, Justas Dauparas, Sue Y Yi, Erin C Yang, Quinton Dowling, Hannah Nguyen, Alex Kang, Asim K Bera, Banumathi Sankaran, Renko de Vries, Julien S Baker, Neil P King
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN. Proceedings of the National Academy of Sciences of the United States of America 121 (13) (2024)
Linna An, Meerit Y Said, Long Tran, Sagardip Majumder, Inna Goreshnik, Gyu Rie Lee, David C Juergens, Justas Dauparas, Ivan Anishchenko, Brian Coventry, Asim K Bera, Alex Kang, Paul M Levine, Valentina Alvarez, Arvind S Pillai, Christoffer H Norn, David Feldman, Dmitri Zorine, Derrick R Hicks, Xinting Li, Mariana Garcia Sanchez, Dionne K Vafeados, Patrick J Salveson, Anastassia Andreevna Vorobieva, Julien S Baker
Binding and sensing diverse small molecules using shape-complementary pseudocycles. Science (New York, N.Y.) 385 (6706) (2024)
Linna An, Meerit Y Said, Long Tran, Sagardip Majumder, Inna Goreshnik, Gyu Rie Lee, David C Juergens, Justas Dauparas, Ivan Anishchenko, Brian Coventry, Asim K Bera, Alex Kang, Paul M Levine, Valentina Alvarez, Arvind S Pillai, Christoffer H Norn, David Feldman, Dmitri Zorine, Derrick R Hicks, Xinting Li, Mariana Garcia Sanchez, Dionne K Vafeados, Patrick J Salveson, Anastassia Andreevna Vorobieva, Julien S Baker
Binding and sensing diverse small molecules using shape-complementary pseudocycles. Science (New York, N.Y.) 385 (6706) (2024)
Samuel Berhanu, Sagardip Majumder, Thomas Müntener, James Whitehouse, Carolin Berner, Asim K Bera, Alex Kang, Binyong Liang, G Nasir Khan, Banumathi Sankaran, Lukas K Tamm, David J Brockwell, Sebastian Hiller, Sheena E Radford, Julien S Baker, Anastassia Andreevna Vorobieva
Sculpting conducting nanopore size and shape through de novo protein design. Science (New York, N.Y.) 385 (6706) (2024)
Robbert J de Haas, Natalie Brunette, Alexander D Goodson, Justas Dauparas, Sue Y Yi, Erin C Yang, Quinton Dowling, Hannah Nguyen, Alex Kang, Asim K Bera, Banumathi Sankaran, Renko de Vries, Julien S Baker, Neil P King
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN. Proceedings of the National Academy of Sciences of the United States of America 121 (13) (2024)
David Edwin Kim, Joseph L Watson, David C Juergens, Sagardip Majumder, Stacey R Gerben, Alex Kang, Asim K Bera, Xinting Li, Julien S Baker
Parametrically guided design of beta barrels and transmembrane nanopores using deep learning. bioRxiv : the preprint server for biology (2024)
Rohith Krishna, Jue Wang, Woody Ahern, Pascal Sturmfels, Preetham Venkatesh, Indrek Kalvet, Gyu Rie Lee, Felix S Morey-Burrows, Ivan Anishchenko, Ian R Humphreys, Ryan McHugh, Dionne K Vafeados, Xinting Li, George A Sutherland, Andrew Hitchcock, Christopher Neil Hunter, Alex Kang, Evans Brackenbrough, Asim K Bera, Minkyung Baek, Frank Dimaio, Julien S Baker
Generalized biomolecular modeling and design with RoseTTAFold All-Atom. Science (New York, N.Y.) 384 (6693) (2024)
Rohith Krishna, Jue Wang, Woody Ahern, Pascal Sturmfels, Preetham Venkatesh, Indrek Kalvet, Gyu Rie Lee, Felix S Morey-Burrows, Ivan Anishchenko, Ian R Humphreys, Ryan McHugh, Dionne K Vafeados, Xinting Li, George A Sutherland, Andrew Hitchcock, Christopher Neil Hunter, Alex Kang, Evans Brackenbrough, Asim K Bera, Minkyung Baek, Frank Dimaio, Julien S Baker
Generalized biomolecular modeling and design with RoseTTAFold All-Atom. Science (New York, N.Y.) (2024)
Samuel Berhanu, Sagardip Majumder, Thomas Müntener, James Whitehouse, Carolin Berner, Asim K Bera, Alex Kang, Binyong Liang, G Nasir Khan, Banumathi Sankaran, Lukas K Tamm, David J Brockwell, Sebastian Hiller, Sheena E Radford, Julien S Baker, Anastassia Andreevna Vorobieva
Sculpting conducting nanopore size and shape through de novo protein design. Science (New York, N.Y.) 385 (6706) (2024)
Robbert J de Haas, Natalie Brunette, Alexander D Goodson, Justas Dauparas, Sue Y Yi, Erin C Yang, Quinton Dowling, Hannah Nguyen, Alex Kang, Asim K Bera, Banumathi Sankaran, Renko de Vries, Julien S Baker, Neil P King
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN. Proceedings of the National Academy of Sciences of the United States of America 121 (13) (2024)
David Edwin Kim, Joseph L Watson, David C Juergens, Sagardip Majumder, Stacey R Gerben, Alex Kang, Asim K Bera, Xinting Li, Julien S Baker
Parametrically guided design of beta barrels and transmembrane nanopores using deep learning. bioRxiv : the preprint server for biology (2024)
Robbert J de Haas, Natalie Brunette, Alexander D Goodson, Justas Dauparas, Sue Y Yi, Erin C Yang, Quinton Dowling, Hannah Nguyen, Alex Kang, Asim K Bera, Banumathi Sankaran, Renko de Vries, Julien S Baker, Neil P King
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN. Proceedings of the National Academy of Sciences of the United States of America 121 (13) (2024)
Patrick J Salveson, Adam P Moyer, Meerit Y Said, Gizem Gӧkçe, Xinting Li, Alex Kang, Hannah Nguyen, Asim K Bera, Paul M Levine, Gaurav Bhardwaj, Julien S Baker
Expansive discovery of chemically diverse structured macrocyclic oligoamides. Science (New York, N.Y.) 384 (6694) (2024)
Patrick J Salveson, Adam P Moyer, Meerit Y Said, Gizem Gӧkçe, Xinting Li, Alex Kang, Hannah Nguyen, Asim K Bera, Paul M Levine, Gaurav Bhardwaj, Julien S Baker
Expansive discovery of chemically diverse structured macrocyclic oligoamides. Science (New York, N.Y.) 384 (6694) (2024)
Robbert J de Haas, Natalie Brunette, Alexander D Goodson, Justas Dauparas, Sue Y Yi, Erin C Yang, Quinton Dowling, Hannah Nguyen, Alex Kang, Asim K Bera, Banumathi Sankaran, Renko de Vries, Julien S Baker, Neil P King
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN. Proceedings of the National Academy of Sciences of the United States of America 121 (13) (2024)
Patrick J Salveson, Adam P Moyer, Meerit Y Said, Gizem Gӧkçe, Xinting Li, Alex Kang, Hannah Nguyen, Asim K Bera, Paul M Levine, Gaurav Bhardwaj, Julien S Baker
Expansive discovery of chemically diverse structured macrocyclic oligoamides. Science (New York, N.Y.) 384 (6694) (2024)
David Edwin Kim, Joseph L Watson, David C Juergens, Sagardip Majumder, Stacey R Gerben, Alex Kang, Asim K Bera, Xinting Li, Julien S Baker
Parametrically guided design of beta barrels and transmembrane nanopores using deep learning. bioRxiv : the preprint server for biology (2024)
Rohith Krishna, Jue Wang, Woody Ahern, Pascal Sturmfels, Preetham Venkatesh, Indrek Kalvet, Gyu Rie Lee, Felix S Morey-Burrows, Ivan Anishchenko, Ian R Humphreys, Ryan McHugh, Dionne K Vafeados, Xinting Li, George A Sutherland, Andrew Hitchcock, Christopher Neil Hunter, Alex Kang, Evans Brackenbrough, Asim K Bera, Minkyung Baek, Frank Dimaio, Julien S Baker
Generalized biomolecular modeling and design with RoseTTAFold All-Atom. Science (New York, N.Y.) 384 (6693) (2024)
Rohith Krishna, Jue Wang, Woody Ahern, Pascal Sturmfels, Preetham Venkatesh, Indrek Kalvet, Gyu Rie Lee, Felix S Morey-Burrows, Ivan Anishchenko, Ian R Humphreys, Ryan McHugh, Dionne K Vafeados, Xinting Li, George A Sutherland, Andrew Hitchcock, Christopher Neil Hunter, Alex Kang, Evans Brackenbrough, Asim K Bera, Minkyung Baek, Frank Dimaio, Julien S Baker
Generalized biomolecular modeling and design with RoseTTAFold All-Atom. Science (New York, N.Y.) 384 (6693) (2024)
Robbert J de Haas, Roderick P Tas, Daniëlle van den Broek, Chuanbao Zheng, Hannah Nguyen, Alex Kang, Asim K Bera, Neil P King, Ilja Karina Voets, Renko de Vries
De novo designed ice-binding proteins from twist-constrained helices. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
Robbert J de Haas, Roderick P Tas, Daniëlle van den Broek, Chuanbao Zheng, Hannah Nguyen, Alex Kang, Asim K Bera, Neil P King, Ilja Karina Voets, Renko de Vries
De novo designed ice-binding proteins from twist-constrained helices. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
David Edwin Kim, Davin R Jensen, David Feldman, Doug Tischer, Ayesha Saleem, Cameron M Chow, Xinting Li, Lauren Carter, Lukas F Milles, Hannah Nguyen, Alex Kang, Asim K Bera, Francis C Peterson, Brian F Volkman, Sergey Ovchinnikov, Julien S Baker
De novo design of small beta barrel proteins. Proceedings of the National Academy of Sciences of the United States of America 120 (11) (2023)
David Edwin Kim, Davin R Jensen, David Feldman, Doug Tischer, Ayesha Saleem, Cameron M Chow, Xinting Li, Lauren Carter, Lukas F Milles, Hannah Nguyen, Alex Kang, Asim K Bera, Francis C Peterson, Brian F Volkman, Sergey Ovchinnikov, Julien S Baker
De novo design of small beta barrel proteins. Proceedings of the National Academy of Sciences of the United States of America 120 (11) (2023)
David Edwin Kim, Davin R Jensen, David Feldman, Doug Tischer, Ayesha Saleem, Cameron M Chow, Xinting Li, Lauren Carter, Lukas F Milles, Hannah Nguyen, Alex Kang, Asim K Bera, Francis C Peterson, Brian F Volkman, Sergey Ovchinnikov, Julien S Baker
De novo design of small beta barrel proteins. Proceedings of the National Academy of Sciences of the United States of America 120 (11) (2023)
Robbert J de Haas, Roderick P Tas, Daniëlle van den Broek, Chuanbao Zheng, Hannah Nguyen, Alex Kang, Asim K Bera, Neil P King, Ilja Karina Voets, Renko de Vries
De novo designed ice-binding proteins from twist-constrained helices. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
Jing Yang John Wang, Alena Khmelinskaia, William Sheffler, Marcos C Miranda, Aleksandar Antanasijevic, Andrew J Borst, Susana Vázquez Torres, Chelsea Shu, Yang Hsia, Una Nattermann, Daniel Ellis, Carl Walkey, Maggie Ahlrichs, Sidney Chan, Alex Kang, Hannah Nguyen, Claire Sydeman, Banumathi Sankaran, Mengyu Wu, Asim K Bera, Lauren Carter, Brooke Fiala, Michael Murphy, Julien S Baker, Andrew B Ward, Neil P King
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proceedings of the National Academy of Sciences of the United States of America 120 (11) (2023)
Jing Yang John Wang, Alena Khmelinskaia, William Sheffler, Marcos C Miranda, Aleksandar Antanasijevic, Andrew J Borst, Susana Vázquez Torres, Chelsea Shu, Yang Hsia, Una Nattermann, Daniel Ellis, Carl Walkey, Maggie Ahlrichs, Sidney Chan, Alex Kang, Hannah Nguyen, Claire Sydeman, Banumathi Sankaran, Mengyu Wu, Asim K Bera, Lauren Carter, Brooke Fiala, Michael Murphy, Julien S Baker, Andrew B Ward, Neil P King
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proceedings of the National Academy of Sciences of the United States of America 120 (11) (2023)
Jing Yang John Wang, Alena Khmelinskaia, William Sheffler, Marcos C Miranda, Aleksandar Antanasijevic, Andrew J Borst, Susana Vázquez Torres, Chelsea Shu, Yang Hsia, Una Nattermann, Daniel Ellis, Carl Walkey, Maggie Ahlrichs, Sidney Chan, Alex Kang, Hannah Nguyen, Claire Sydeman, Banumathi Sankaran, Mengyu Wu, Asim K Bera, Lauren Carter, Brooke Fiala, Michael Murphy, Julien S Baker, Andrew B Ward, Neil P King
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proceedings of the National Academy of Sciences of the United States of America 120 (11) (2023)
Jing Yang John Wang, Alena Khmelinskaia, William Sheffler, Marcos C Miranda, Aleksandar Antanasijevic, Andrew J Borst, Susana Vázquez Torres, Chelsea Shu, Yang Hsia, Una Nattermann, Daniel Ellis, Carl Walkey, Maggie Ahlrichs, Sidney Chan, Alex Kang, Hannah Nguyen, Claire Sydeman, Banumathi Sankaran, Mengyu Wu, Asim K Bera, Lauren Carter, Brooke Fiala, Michael Murphy, Julien S Baker, Andrew B Ward, Neil P King
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proceedings of the National Academy of Sciences of the United States of America 120 (11) (2023)
Florian Praetorius, Philip J Y Leung, Maxx H Tessmer, Adam Broerman, Cullen Demakis, Acacia F Dishman, Arvind S Pillai, Abbas Idris, David C Juergens, Justas Dauparas, Xinting Li, Paul M Levine, Mila Lamb, Ryanne K Ballard, Stacey R Gerben, Hannah Nguyen, Alex Kang, Banumathi Sankaran, Asim K Bera, Brian F Volkman, Jeff Nivala, Stefan Stoll, Julien S Baker
Design of stimulus-responsive two-state hinge proteins. Science (New York, N.Y.) 381 (6659) (2023)
Danny D Sahtoe, Florian Praetorius, Alexis Courbet, Yang Hsia, Basile I M Wicky, Natasha I Edman, Lauren M Miller, Bart J R Timmermans, Justin Decarreau, Hana M Morris, Alex Kang, Asim K Bera, Julien S Baker
Reconfigurable asymmetric protein assemblies through implicit negative design. Science (New York, N.Y.) 375 (6578) (2022)
Basile I M Wicky, Lukas F Milles, Alexis Courbet, Robert J Ragotte, Justas Dauparas, E Kinfu, S Tipps, Ryan D Kibler, Minkyung Baek, Frank Dimaio, Xinting Li, Lauren Carter, Alex Kang, Hannah Nguyen, Asim K Bera, Julien S Baker
Hallucinating symmetric protein assemblies. Science (New York, N.Y.) 378 (6615) (2022)
Justas Dauparas, David Baker, Nathaniel R Bennett, Hua Bai, Robert J Ragotte, Lukas F Milles, Basile I M Wicky, Alexis Courbet, Robbert J de Haas, Neville P Bethel, P J Y Leung, Timothy F Huddy, S Pellock, Doug K Tischer, F Chan, B Koepnick, Hannah Nguyen, Alex Kang, Banumathi Sankaran, Asim K Bera, Neil P King, Julien S Baker
Robust deep learning-based protein sequence design using ProteinMPNN. Science (New York, N.Y.) 378 (6615) (2022)
Anastassia Andreevna Vorobieva, Paul White, Binyong Liang, Jim E Horne, Asim K Bera, Cameron M Chow, Stacey R Gerben, Sinduja K Marx, Alex Kang, Alyssa Q Stiving, Sophie R Harvey, Dagan C Marx, G Nasir Khan, Karen G Fleming, Vicki H Wysocki, David J Brockwell, Lukas K Tamm, Sheena E Radford, Julien S Baker
De novo design of transmembrane β barrels. Science (New York, N.Y.) 371 (6531) (2021)