Christophe Klopp

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 47

Top Topics

Dna Methylation

Sentinel Lymph Node

Top Venues

Nature communications

Science (New York, N.Y.)

Molecular ecology resources

This page only lists publications with an associated author ORCID identifier.

Publications

Heiner Kuhl, Wen Hui Tan, Christophe Klopp, Wibke Kleiner, Baturalp Koyun, Mitica Ciorpac, Romain Feron, Martin Knytl, Werner Kloas, Manfred Schartl, Christoph Winkler, Matthias Stöck
A candidate sex determination locus in amphibians which evolved by structural variation between X- and Y-chromosomes. Nature communications 15 (1) (2024)
Gaia Cortinovis, Leonardo Vincenzi, Robyn Anderson, Giovanni Marturano, Jacob Ian Marsh, Philipp Emanuel Bayer, Lorenzo Rocchetti, Giulia Frascarelli, Giovanna Lanzavecchia, Alice Pieri, Andrea Benazzo, Elisa Bellucci, Valerio Di Vittori, Laura Nanni, Juan Jose Ferreira, Marzia Rossato, Orlando Mario Aguilar, Peter Laurent Morrell, Monica Rodriguez, Tania Gioia, Kerstin Neumann, Juan Camilo Alvarez Diaz, Ariane Gratias, Christophe Klopp, Elena Bitocchi, Valérie Geffroy, Massimo Delledonne, David Edwards, Roberto Papa
Adaptive gene loss in the common bean pan-genome during range expansion and domestication. Nature communications 15 (1) (2024)
Heiner Kuhl, Peter T Euclide, Christophe Klopp, Cédric Cabau, Margot Zahm, Céline Roques, Carole Iampietro, Claire Kuchly, Cécile Donnadieu, Romain Feron, Hugues Parrinello, Charles Poncet, Lydia Jaffrelo, Carole Confolent, Ming Wen, Amaury Herpin, Elodie Jouanno, Anastasia Bestin, Pierrick Haffray, Romain Morvezen, Taina Rocha de Almeida, Thomas Lecocq, Bérénice Schaerlinger, Dominique Chardard, Daniel Żarski, Wesley A Larson, John H Postlethwait, Serik Timirkhanov, Werner Kloas, Sven Wuertz, Matthias Stöck, Yann Guiguen
Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC biology 22 (1) (2024)
Heiner Kuhl, Peter T Euclide, Christophe Klopp, Cédric Cabau, Margot Zahm, Céline Roques, Carole Iampietro, Claire Kuchly, Cécile Donnadieu, Romain Feron, Hugues Parrinello, Charles Poncet, Lydia Jaffrelo, Carole Confolent, Ming Wen, Amaury Herpin, Elodie Jouanno, Anastasia Bestin, Pierrick Haffray, Romain Morvezen, Taina Rocha de Almeida, Thomas Lecocq, Bérénice Schaerlinger, Dominique Chardard, Daniel Żarski, Wesley A Larson, John H Postlethwait, Serik Timirkhanov, Werner Kloas, Sven Wuertz, Matthias Stöck, Yann Guiguen
Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC biology 22 (1) (2024)
Heiner Kuhl, Peter T Euclide, Christophe Klopp, Cédric Cabau, Margot Zahm, Céline Roques, Carole Iampietro, Claire Kuchly, Cécile Donnadieu, Romain Feron, Hugues Parrinello, Charles Poncet, Lydia Jaffrelo, Carole Confolent, Ming Wen, Amaury Herpin, Elodie Jouanno, Anastasia Bestin, Pierrick Haffray, Romain Morvezen, Taina Rocha de Almeida, Thomas Lecocq, Bérénice Schaerlinger, Dominique Chardard, Daniel Żarski, Wesley A Larson, John H Postlethwait, Serik Timirkhanov, Werner Kloas, Sven Wuertz, Matthias Stöck, Yann Guiguen
Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC biology 22 (1) (2024)
Gaia Cortinovis, Leonardo Vincenzi, Robyn Anderson, Giovanni Marturano, Jacob Ian Marsh, Philipp Emanuel Bayer, Lorenzo Rocchetti, Giulia Frascarelli, Giovanna Lanzavecchia, Alice Pieri, Andrea Benazzo, Elisa Bellucci, Valerio Di Vittori, Laura Nanni, Juan Jose Ferreira, Marzia Rossato, Orlando Mario Aguilar, Peter Laurent Morrell, Monica Rodriguez, Tania Gioia, Kerstin Neumann, Juan Camilo Alvarez Diaz, Ariane Gratias, Christophe Klopp, Elena Bitocchi, Valérie Geffroy, Massimo Delledonne, David Edwards, Roberto Papa
Adaptive gene loss in the common bean pan-genome during range expansion and domestication. Nature communications 15 (1) (2024)
Heiner Kuhl, Peter T Euclide, Christophe Klopp, Cédric Cabau, Margot Zahm, Céline Roques, Carole Iampietro, Claire Kuchly, Cécile Donnadieu, Romain Feron, Hugues Parrinello, Charles Poncet, Lydia Jaffrelo, Carole Confolent, Ming Wen, Amaury Herpin, Elodie Jouanno, Anastasia Bestin, Pierrick Haffray, Romain Morvezen, Taina Rocha de Almeida, Thomas Lecocq, Bérénice Schaerlinger, Dominique Chardard, Daniel Żarski, Wesley A Larson, John H Postlethwait, Serik Timirkhanov, Werner Kloas, Sven Wuertz, Matthias Stöck, Yann Guiguen
Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC biology 22 (1) (2024)
Heiner Kuhl, Wen Hui Tan, Christophe Klopp, Wibke Kleiner, Baturalp Koyun, Mitica Ciorpac, Romain Feron, Martin Knytl, Werner Kloas, Manfred Schartl, Christoph Winkler, Matthias Stöck
A candidate sex determination locus in amphibians which evolved by structural variation between X- and Y-chromosomes. Nature communications 15 (1) (2024)
Heiner Kuhl, Peter T Euclide, Christophe Klopp, Cédric Cabau, Margot Zahm, Céline Roques, Carole Iampietro, Claire Kuchly, Cécile Donnadieu, Romain Feron, Hugues Parrinello, Charles Poncet, Lydia Jaffrelo, Carole Confolent, Ming Wen, Amaury Herpin, Elodie Jouanno, Anastasia Bestin, Pierrick Haffray, Romain Morvezen, Taina Rocha de Almeida, Thomas Lecocq, Bérénice Schaerlinger, Dominique Chardard, Daniel Żarski, Wesley A Larson, John H Postlethwait, Serik Timirkhanov, Werner Kloas, Sven Wuertz, Matthias Stöck, Yann Guiguen
Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC biology 22 (1) (2024)
Heiner Kuhl, Wen Hui Tan, Christophe Klopp, Wibke Kleiner, Baturalp Koyun, Mitica Ciorpac, Romain Feron, Martin Knytl, Werner Kloas, Manfred Schartl, Christoph Winkler, Matthias Stöck
A candidate sex determination locus in amphibians which evolved by structural variation between X- and Y-chromosomes. Nature communications 15 (1) (2024)
Heiner Kuhl, Peter T Euclide, Christophe Klopp, Cédric Cabau, Margot Zahm, Céline Roques, Carole Iampietro, Claire Kuchly, Cécile Donnadieu, Romain Feron, Hugues Parrinello, Charles Poncet, Lydia Jaffrelo, Carole Confolent, Ming Wen, Amaury Herpin, Elodie Jouanno, Anastasia Bestin, Pierrick Haffray, Romain Morvezen, Taina Rocha de Almeida, Thomas Lecocq, Bérénice Schaerlinger, Dominique Chardard, Daniel Żarski, Wesley A Larson, John H Postlethwait, Serik Timirkhanov, Werner Kloas, Sven Wuertz, Matthias Stöck, Yann Guiguen
Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC biology 22 (1) (2024)
Heiner Kuhl, Peter T Euclide, Christophe Klopp, Cédric Cabau, Margot Zahm, Céline Roques, Carole Iampietro, Claire Kuchly, Cécile Donnadieu, Romain Feron, Hugues Parrinello, Charles Poncet, Lydia Jaffrelo, Carole Confolent, Ming Wen, Amaury Herpin, Elodie Jouanno, Anastasia Bestin, Pierrick Haffray, Romain Morvezen, Taina Rocha de Almeida, Thomas Lecocq, Bérénice Schaerlinger, Dominique Chardard, Daniel Żarski, Wesley A Larson, John H Postlethwait, Serik Timirkhanov, Werner Kloas, Sven Wuertz, Matthias Stöck, Yann Guiguen
Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC biology 22 (1) (2024)
Gaia Cortinovis, Leonardo Vincenzi, Robyn Anderson, Giovanni Marturano, Jacob Ian Marsh, Philipp Emanuel Bayer, Lorenzo Rocchetti, Giulia Frascarelli, Giovanna Lanzavecchia, Alice Pieri, Andrea Benazzo, Elisa Bellucci, Valerio Di Vittori, Laura Nanni, Juan Jose Ferreira, Marzia Rossato, Orlando Mario Aguilar, Peter Laurent Morrell, Monica Rodriguez, Tania Gioia, Kerstin Neumann, Juan Camilo Alvarez Diaz, Ariane Gratias, Christophe Klopp, Elena Bitocchi, Valérie Geffroy, Massimo Delledonne, David Edwards, Roberto Papa
Adaptive gene loss in the common bean pan-genome during range expansion and domestication. Nature communications 15 (1) (2024)
Ayman Sabra, Nicolas Biteau, Jean-William Dupuy, Christophe Klopp, Thierry Noël, Karine Dementhon
Mediator Subunit Med15 Regulates Cell Morphology and Mating in Candida lusitaniae . Journal of fungi (Basel, Switzerland) 9 (3) (2023)
Elise Parey, Alexandra Louis, Jerome Montfort, Olivier Bouchez, Céline Roques, Carole Iampietro, Jerome Lluch, Adrien Castinel, Cécile Donnadieu, Thomas Desvignes, Christabel Floi Bucao, Elodie Jouanno, Ming Wen, Sahar C Mejri, Ron P Dirks, Hans J Jansen, Christiaan V Henkel, Wei-Jen Chen, Margot Zahm, Cédric Cabau, Christophe Klopp, Andrew W Thompson, Marc Robinson-Rechavi, Ingo Braasch, Guillaume Lecointre, Julien Bobe, John H Postlethwait, Camille Berthelot, Hugues Roest Crollius, Yann Guiguen
Genome structures resolve the early diversification of teleost fishes. Science (New York, N.Y.) 379 (6632) (2023)
Ayman Sabra, Nicolas Biteau, Jean-William Dupuy, Christophe Klopp, Thierry Noël, Karine Dementhon
Mediator Subunit Med15 Regulates Cell Morphology and Mating in Candida lusitaniae . Journal of fungi (Basel, Switzerland) 9 (3) (2023)
Elise Parey, Alexandra Louis, Jerome Montfort, Olivier Bouchez, Céline Roques, Carole Iampietro, Jerome Lluch, Adrien Castinel, Cécile Donnadieu, Thomas Desvignes, Christabel Floi Bucao, Elodie Jouanno, Ming Wen, Sahar C Mejri, Ron P Dirks, Hans J Jansen, Christiaan V Henkel, Wei-Jen Chen, Margot Zahm, Cédric Cabau, Christophe Klopp, Andrew W Thompson, Marc Robinson-Rechavi, Ingo Braasch, Guillaume Lecointre, Julien Bobe, John H Postlethwait, Camille Berthelot, Hugues Roest Crollius, Yann Guiguen
Genome structures resolve the early diversification of teleost fishes. Science (New York, N.Y.) 379 (6632) (2023)
Camille Eché, Carole Iampietro, Clément Birbes, Andreea Dréau, Claire Kuchly, Arnaud Di Franco, Christophe Klopp, Thomas Faraut, Sarah Djebali, Adrien Castinel, Matthias Zytnicki, Erwan Denis, Mekki Boussaha, Cécile Grohs, Didier Boichard, Christine Gaspin, Denis Milan, Cécile Donnadieu
A Bos taurus sequencing methods benchmark for assembly, haplotyping, and variant calling. Scientific data 10 (1) (2023)
Heiner Kuhl, Peter T Euclide, Christophe Klopp, Cédric Cabau, Margot Zahm, Céline Roques, Carole Iampietro, Claire Kuchly, Cécile Donnadieu, Romain Feron, Hugues Parrinello, Charles Poncet, Lydia Jaffrelo, Carole Confolent, Ming Wen, Amaury Herpin, Elodie Jouanno, Anastasia Bestin, Pierrick Haffray, Romain Morvezen, Taina Rocha de Almeida, Thomas Lecocq, Bérénice Schaerlinger, Dominique Chardard, Daniel Żarski, Wes Larson, John H Postlethwait, Serik Timirkhanov, Werner Kloas, Sven Wuertz, Matthias Stöck, Yann Guiguen
Multi-genome comparisons reveal gain-and-loss evolution of the anti-Mullerian hormone receptor type 2 gene, an old master sex determining gene, in Percidae. bioRxiv : the preprint server for biology (2023)
Ayman Sabra, Nicolas Biteau, Jean-William Dupuy, Christophe Klopp, Thierry Noël, Karine Dementhon
Mediator Subunit Med15 Regulates Cell Morphology and Mating in Candida lusitaniae . Journal of fungi (Basel, Switzerland) 9 (3) (2023)
Elise Parey, Alexandra Louis, Jerome Montfort, Olivier Bouchez, Céline Roques, Carole Iampietro, Jerome Lluch, Adrien Castinel, Cécile Donnadieu, Thomas Desvignes, Christabel Floi Bucao, Elodie Jouanno, Ming Wen, Sahar C Mejri, Ron P Dirks, Hans J Jansen, Christiaan V Henkel, Wei-Jen Chen, Margot Zahm, Cédric Cabau, Christophe Klopp, Andrew W Thompson, Marc Robinson-Rechavi, Ingo Braasch, Guillaume Lecointre, Julien Bobe, John H Postlethwait, Camille Berthelot, Hugues Roest Crollius, Yann Guiguen
Genome structures resolve the early diversification of teleost fishes. Science (New York, N.Y.) 379 (6632) (2023)
Elise Parey, Alexandra Louis, Jerome Montfort, Olivier Bouchez, Céline Roques, Carole Iampietro, Jerome Lluch, Adrien Castinel, Cécile Donnadieu, Thomas Desvignes, Christabel Floi Bucao, Elodie Jouanno, Ming Wen, Sahar C Mejri, Ron P Dirks, Hans J Jansen, Christiaan V Henkel, Wei-Jen Chen, Margot Zahm, Cédric Cabau, Christophe Klopp, Andrew W Thompson, Marc Robinson-Rechavi, Ingo Braasch, Guillaume Lecointre, Julien Bobe, John H Postlethwait, Camille Berthelot, Hugues Roest Crollius, Yann Guiguen
Genome structures resolve the early diversification of teleost fishes. Science (New York, N.Y.) 379 (6632) (2023)
Nico Nouwen, Marjorie Pervent, Franck El M'Chirgui, Frédérique Tellier, Maëlle Rios, Natasha Horta Araújo, Christophe Klopp, Frédéric Gressent, Jean-François Arrighi
OROSOMUCOID PROTEIN 1 regulation of sphingolipid synthesis is required for nodulation in Aeschynomene evenia. Plant physiology (2023)
Elise Parey, Alexandra Louis, Jerome Montfort, Olivier Bouchez, Céline Roques, Carole Iampietro, Jerome Lluch, Adrien Castinel, Cécile Donnadieu, Thomas Desvignes, Christabel Floi Bucao, Elodie Jouanno, Ming Wen, Sahar C Mejri, Ron P Dirks, Hans J Jansen, Christiaan V Henkel, Wei-Jen Chen, Margot Zahm, Cédric Cabau, Christophe Klopp, Andrew W Thompson, Marc Robinson-Rechavi, Ingo Braasch, Guillaume Lecointre, Julien Bobe, John H Postlethwait, Camille Berthelot, Hugues Roest Crollius, Yann Guiguen
Genome structures resolve the early diversification of teleost fishes. Science (New York, N.Y.) 379 (6632) (2023)
Elise Parey, Alexandra Louis, Jerome Montfort, Olivier Bouchez, Céline Roques, Carole Iampietro, Jerome Lluch, Adrien Castinel, Cécile Donnadieu, Thomas Desvignes, Christabel Floi Bucao, Elodie Jouanno, Ming Wen, Sahar C Mejri, Ron P Dirks, Hans J Jansen, Christiaan V Henkel, Wei-Jen Chen, Margot Zahm, Cédric Cabau, Christophe Klopp, Andrew W Thompson, Marc Robinson-Rechavi, Ingo Braasch, Guillaume Lecointre, Julien Bobe, John H Postlethwait, Camille Berthelot, Hugues Roest Crollius, Yann Guiguen
Genome structures resolve the early diversification of teleost fishes. Science (New York, N.Y.) 379 (6632) (2023)
Johan Quilbé, Nico Nouwen, Marjorie Pervent, Rémi Guyonnet, Julie Cullimore, Frédéric Gressent, Natasha Horta Araújo, Djamel Gully, Christophe Klopp, Eric Giraud, Jean-François Arrighi
A mutant-based analysis of the establishment of Nod-independent symbiosis in the legume Aeschynomene evenia. Plant physiology 190 (2) (2022)
Ming Wen, Qiaowei Pan, Elodie Jouanno, Jerome Montfort, Margot Zahm, Cédric Cabau, Christophe Klopp, Carole Iampietro, Céline Roques, Olivier Bouchez, Adrien Castinel, Cécile Donnadieu, Hugues Parrinello, Charles Poncet, Elodie Belmonte, Véronique Gautier, Jean-Christophe Avarre, Remi Dugue, Rudhy Gustiano, Trần Thị Thúy Hà, Marc Campet, Kednapat Sriphairoj, Josiane Ribolli, Fernanda L de Almeida, Thomas Desvignes, John H Postlethwait, Christabel Floi Bucao, Marc Robinson-Rechavi, Julien Bobe, Amaury Herpin, Yann Guiguen
An ancient truncated duplication of the anti-Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family. Molecular ecology resources 22 (6) (2022)
Andrew J Jasonowicz, Anna Simeon, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, Carole Iampietro, Jérôme Lluch, Cécile Donnadieu, Hugues Parrinello, Daniel P Drinan, Lorenz Hauser, Yann Guiguen, Josep V Planas
Generation of a chromosome-level genome assembly for Pacific halibut (Hippoglossus stenolepis) and characterization of its sex-determining genomic region. Molecular ecology resources 22 (7) (2022)
Romain Feron, Qiaowei Pan, Ming Wen, Boudjema Imarazene, Elodie Jouanno, Jennifer L Anderson, Amaury Herpin, Laurent Journot, Hugues Parrinello, Christophe Klopp, Verena A Kottler, Alvaro S Roco, Kang Du, Susanne Kneitz, Mateus Adolfi, Catherine A Wilson, Braedan McCluskey, Angel Amores, Thomas Desvignes, Frederick W Goetz, Ato Takanashi, Mari Kawaguchi, Harry William Detrich, Marcos Antônio de Oliveira, Rafael Henrique Nóbrega, Takashi Sakamoto, Masatoshi Nakamoto, Anna Wargelius, Ørjan Karlsen, Zhongwei Wang, Matthias Stöck, Robert M Waterhouse, Ingo Braasch, John H Postlethwait, Manfred Schartl, Yann Guiguen
RADSex: A computational workflow to study sex determination using restriction site-associated DNA sequencing data. Molecular ecology resources 21 (5) (2021)
Johan Quilbé, Léo Lamy, Laurent Brottier, Philippe Leleux, Joël Fardoux, Ronan Rivallan, Thomas Benichou, Rémi Guyonnet, Manuel Becana, Irene Villar, Olivier Garsmeur, Barbara Hufnagel, Amandine Delteil, Djamel Gully, Clémence Chaintreuil, Marjorie Pervent, Fabienne Cartieaux, Mickaël Bourge, Nicolas Valentin, Guillaume Martin, Loïc Fontaine, Gaëtan Droc, Alexis Dereeper, Andrew Farmer, Cyril Libourel, Nico Nouwen, Frédéric Gressent, Pierre Mournet, Angélique D'Hont, Eric Giraud, Christophe Klopp, Jean-François Arrighi
Genetics of nodulation in Aeschynomene evenia uncovers mechanisms of the rhizobium-legume symbiosis. Nature communications 12 (1) (2021)
Qiaowei Pan, Romain Feron, Elodie Jouanno, Hugo Darras, Amaury Herpin, Ben Koop, Eric Rondeau, Frederick W Goetz, Wesley A Larson, Louis Bernatchez, Mike Tringali, Stephen S Curran, Eric Saillant, Gael Pj Denys, Frank Arthur von Hippel, Songlin Chen, J Andrés López, Hugo Verreycken, Konrad Ocalewicz, Rene Guyomard, Camille Eche, Jerome Lluch, Celine Roques, Hongxia Hu, Roger Tabor, Patrick DeHaan, Krista M Nichols, Laurent Journot, Hugues Parrinello, Christophe Klopp, Elena A Interesova, Vladimir Trifonov, Manfred Schartl, John Postlethwait, Yann Guiguen
The rise and fall of the ancient northern pike master sex-determining gene. eLife 10 (2021)
Ngan Thi Phan, Julie Orjuela, Etienne G J Danchin, Christophe Klopp, Laetitia Perfus-Barbeoch, Djampa K L Kozlowski, Georgios D Koutsovoulos, Céline Lopez-Roques, Olivier Bouchez, Margot Zahm, Guillaume Besnard, Stéphane Bellafiore
Genome structure and content of the rice root-knot nematode (Meloidogyne graminicola). Ecology and evolution 10 (20) (2020)
Audrey M Mat, Jozée Sarrazin, Gabriel V Markov, Vincent Apremont, Christine Dubreuil, Camille Eché, Caroline Fabioux, Christophe Klopp, Pierre-Marie Sarradin, Arnaud Tanguy, Arnaud Huvet, Marjolaine Matabos
Biological rhythms in the deep-sea hydrothermal mussel Bathymodiolus azoricus. Nature communications 11 (1) (2020)
Kang Du, Matthias Stöck, Susanne Kneitz, Christophe Klopp, Joost M Woltering, Mateus Contar Adolfi, Romain Feron, Dmitry Yu Prokopov, Alexey I Makunin, Ilya Kichigin, Cornelia Schmidt, Petra Fischer, Heiner Kuhl, Sven Wuertz, Jörn Gessner, Werner Kloas, Cédric Cabau, Carole Iampietro, Hugues Parrinello, Chad Tomlinson, Laurent Journot, John H Postlethwait, Ingo Braasch, Vladimir Trifonov, Wesley C Warren, Axel Meyer, Yann Guiguen, Manfred Schartl
The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization. Nature ecology & evolution 4 (6) (2020)
Romain Feron, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, Olivier Bouchez, Camille Eché, Sophie Valière, Cécile Donnadieu, Pierrick Haffray, Anastasia Bestin, Romain Morvezen, Hervé Acloque, Peter T Euclide, Ming Wen, Elodie Jouano, Manfred Schartl, John H Postlethwait, Claire Schraidt, Mark Redpath Christie, Wesley A Larson, Amaury Herpin, Yann Guiguen
Characterization of a Y-specific duplication/insertion of the anti-Mullerian hormone type II receptor gene based on a chromosome-scale genome assembly of yellow perch, Perca flavescens. Molecular ecology resources 20 (2) (2020)
Yusuke Takehana, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, Olivier Bouchez, Cécile Donnadieu, Celia Barrachina, Laurent Journot, Mari Kawaguchi, Shigeki Yasumasu, Satoshi Ansai, Kiyoshi Naruse, Koji Inoue, Chuya Shinzato, Manfred Schartl, Yann Guiguen, Amaury Herpin
Genome Sequence of the Euryhaline Javafish Medaka, Oryzias javanicus: A Small Aquarium Fish Model for Studies on Adaptation to Salinity. G3 (Bethesda, Md.) 10 (3) (2020)
Hadeer M Aboshady, Nathalie Mandonnet, Michael James Stear, Rémy Arquet, Malia Bederina, Julien Sarry, Gwenola Tosser-Klopp, Christophe Klopp, Anna M Johansson, Elisabeth Jonas, Jean-Christophe Bambou
Transcriptome variation in response to gastrointestinal nematode infection in goats. PloS one 14 (6) (2019)
Anne Dalmon, Philippe Gayral, Damien Decante, Christophe Klopp, Diane Bigot, Maxime Thomasson, Elisabeth Anne Herniou, Cédric Alaux, Yves Le Conte
Viruses in the Invasive Hornet Vespa velutina. Viruses 11 (11) (2019)
Romain Péden, Pascal Poupin, Bénédicte Sohm, Justine Flayac, Laure Giambérini, Christophe Klopp, Fanny Louis, Sandrine Pain-Devin, Marine Potet, Rémy-Félix Serre, Simon Devin
Environmental transcriptomes of invasive dreissena, a model species in ecotoxicology and invasion biology. Scientific data 6 (1) (2019)
Tainá Rocha de Almeida, Maud Alix, Aurélie Le Cam, Christophe Klopp, Jérôme Montfort, Lola Toomey, Yannick Ledoré, Julien Bobe, Dominique Chardard, Bérénice Schaerlinger, Pascal Fontaine
Domestication may affect the maternal mRNA profile in unfertilized eggs, potentially impacting the embryonic development of Eurasian perch (Perca fluviatilis). PloS one 14 (12) (2019)
Kang Du, Sven Wuertz, Mateus Adolfi, Susanne Kneitz, Matthias Stöck, Marcos Oliveira, Rafael Nóbrega, Jenny Ormanns, Werner Kloas, Romain Feron, Christophe Klopp, Hugues Parrinello, Laurent Journot, Shunping He, John H Postlethwait, Axel Meyer, Yann Guiguen, Manfred Schartl
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system. Scientific reports 9 (1) (2019)
Qiaowei Pan, Romain Feron, Ayaka Yano, René Guyomard, Elodie Jouanno, Estelle Vigouroux, Ming Wen, Jean-Mickaël Busnel, Julien Bobe, Jean-Paul Concordet, Hugues Parrinello, Laurent Journot, Christophe Klopp, Jérôme Lluch, Céline Roques, John H Postlethwait, Manfred Schartl, Amaury Herpin, Yann Guiguen
Identification of the master sex determining gene in Northern pike (Esox lucius) reveals restricted sex chromosome differentiation. PLoS genetics 15 (8) (2019)
Christophe Plomion, Jean-Marc Aury, Joëlle Amselem, Thibault Leroy, Florent Murat, Sebastien Duplessis, Sébastien Faye, Nicolas Francillonne, Karine Labadie, Grégoire Le Provost, Isabelle Lesur, Jérôme Bartholomé, Patricia Faivre-Rampant, Annegret Kohler, Jean-Charles Leplé, Nathalie Chantret, Jun Chen, Anne Diévart, Tina Alaeitabar, Valérie Barbe, Caroline Belser, Hélène Bergès, Catherine Bodénès, Marie-Béatrice Bogeat-Triboulot, Marie-Lara Bouffaud, Benjamin Brachi, Emilie Chancerel, David Cohen, Arnaud Couloux, Corinne Da Silva, Carole Dossat, François Ehrenmann, Christine Gaspin, Jacqueline Grima-Pettenati, Erwan Guichoux, Arnaud Hecker, Sylvie Herrmann, Philippe Hugueney, Irène Hummel, Christophe Klopp, Céline Lalanne, Martin Lascoux, Eric Lasserre, Arnaud Lemainque, Marie-Laure Desprez-Loustau, Isabelle Luyten, Mohammed-Amin Madoui, Sophie Mangenot, Clemence Marchal, Florian Maumus, Jonathan Mercier, Célia Michotey, Olivier Panaud, Nathalie Picault, Nicolas Rouhier, Olivier Rué, Camille Rustenholz, Franck Salin, Marçal Soler, Mika Tarkka, Amandine Velt, Amy E Zanne, Francis M Martin, Patrick Wincker, Hadi Quesneville, Antoine Kremer, Jérôme Salse
Oak genome reveals facets of long lifespan. Nature plants 4 (7) (2018)
Floréal Cabanettes, Christophe Klopp
D-GENIES: dot plot large genomes in an interactive, efficient and simple way. PeerJ 6 (2018)
Victoria Dominguez Del Angel, Erik Hjerde, Lieven Sterck, Salvadors Capella-Gutierrez, Cederic Notredame, Olga Vinnere Pettersson, Joelle Amselem, Laurent Bouri, Stéphanie Bocs, Christophe Klopp, Jean-Francois Gibrat, Anna Vlasova, Brane L Leskosek, Lucile Soler, Mahesh Binzer-Panchal, Henrik Lantz
Ten steps to get started in Genome Assembly and Annotation. F1000Research 7 (2018)
Filippo Ciabrelli, Federico Comoglio, Simon Fellous, Boyan Bonev, Maria Ninova, Quentin Szabo, Anne Xuéreb, Christophe Klopp, Alexei Aravin, Renato Paro, Frédéric Bantignies, Giacomo Cavalli
Stable Polycomb-dependent transgenerational inheritance of chromatin states in Drosophila. Nature genetics 49 (6) (2017)
Florent Murat, Alix Armero, Caroline Pont, Christophe Klopp, Jérôme Salse
Reconstructing the genome of the most recent common ancestor of flowering plants. Nature genetics 49 (4) (2017)