David Edwards (D Edwards, Dave Edwards)

Scopus Author ID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 107

Top Venues

Plant biotechnology journal

The plant genome

Nature genetics

Plants (Basel, Switzerland)

This page only lists publications with an associated author ORCID identifier.

Publications

Sangam L Dwivedi, Pat Heslop-Harrison, Junrey Amas, Rodomiro Ortiz, David Edwards
Epistasis and pleiotropy-induced variation for plant breeding. Plant biotechnology journal (2024)
Aamir W Khan, Vanika Garg, Shuai Sun, Saurabh Gupta, Olga Dudchenko, Manish Roorkiwal, Annapurna Chitikineni, Philipp Emanuel Bayer, Chengcheng Shi, Hari D Upadhyaya, Abhishek Bohra, Chellapilla Bharadwaj, Reyazul Rouf Mir, Kobi Baruch, Bicheng Yang, Clarice J Coyne, Kailash C Bansal, Henry T Nguyen, Gil Ronen, Erez Lieberman Aiden, Erik J Veneklaas, Kadambot H M Siddique, Xin Liu, David Edwards, Rajeev Kumar Varshney
Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature genetics (2024)
Aamir W Khan, Vanika Garg, Shuai Sun, Saurabh Gupta, Olga Dudchenko, Manish Roorkiwal, Annapurna Chitikineni, Philipp Emanuel Bayer, Chengcheng Shi, Hari D Upadhyaya, Abhishek Bohra, Chellapilla Bharadwaj, Reyazul Rouf Mir, Kobi Baruch, Bicheng Yang, Clarice J Coyne, Kailash C Bansal, Henry T Nguyen, Gil Ronen, Erez Lieberman Aiden, Erik J Veneklaas, Kadambot H M Siddique, Xin Liu, David Edwards, Rajeev Kumar Varshney
Author Correction: Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature genetics (2024)
Aamir W Khan, Vanika Garg, Shuai Sun, Saurabh Gupta, Olga Dudchenko, Manish Roorkiwal, Annapurna Chitikineni, Philipp Emanuel Bayer, Chengcheng Shi, Hari D Upadhyaya, Abhishek Bohra, Chellapilla Bharadwaj, Reyazul Rouf Mir, Kobi Baruch, Bicheng Yang, Clarice J Coyne, Kailash C Bansal, Henry T Nguyen, Gil Ronen, Erez Lieberman Aiden, Erik J Veneklaas, Kadambot H M Siddique, Xin Liu, David Edwards, Rajeev Kumar Varshney
Author Correction: Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature genetics (2024)
Haifei Hu, Risheng Li, Junliang Zhao, Jacqueline Batley, David Edwards
Technological development and advances for constructing and analysing plant pangenomes. Genome biology and evolution (2024)
William J W Thomas, Junrey C Amas, Aria Dolatabadian, Shuanglong Huang, Fangning Zhang, Jaco D Zandberg, Ting Xiang Neik, David Edwards, Jacqueline Batley
Recent advances in the improvement of genetic resistance against disease in vegetable crops. Plant physiology 196 (1) (2024)
Mark C Derbyshire, Toby E Newman, William J W Thomas, Jacqueline Batley, David Edwards
The complex relationship between disease resistance and yield in crops. Plant biotechnology journal 22 (9) (2024)
Gaia Cortinovis, Leonardo Vincenzi, Robyn Anderson, Giovanni Marturano, Jacob Ian Marsh, Philipp Emanuel Bayer, Lorenzo Rocchetti, Giulia Frascarelli, Giovanna Lanzavecchia, Alice Pieri, Andrea Benazzo, Elisa Bellucci, Valerio Di Vittori, Laura Nanni, Juan Jose Ferreira, Marzia Rossato, Orlando Mario Aguilar, Peter Laurent Morrell, Monica Rodriguez, Tania Gioia, Kerstin Neumann, Juan Camilo Alvarez Diaz, Ariane Gratias, Christophe Klopp, Elena Bitocchi, Valérie Geffroy, Massimo Delledonne, David Edwards, Roberto Papa
Adaptive gene loss in the common bean pan-genome during range expansion and domestication. Nature communications 15 (1) (2024)
Mark C Derbyshire, Toby E Newman, William J W Thomas, Jacqueline Batley, David Edwards
The complex relationship between disease resistance and yield in crops. Plant biotechnology journal (2024)
Gaia Cortinovis, Leonardo Vincenzi, Robyn Anderson, Giovanni Marturano, Jacob Ian Marsh, Philipp Emanuel Bayer, Lorenzo Rocchetti, Giulia Frascarelli, Giovanna Lanzavecchia, Alice Pieri, Andrea Benazzo, Elisa Bellucci, Valerio Di Vittori, Laura Nanni, Juan Jose Ferreira, Marzia Rossato, Orlando Mario Aguilar, Peter Laurent Morrell, Monica Rodriguez, Tania Gioia, Kerstin Neumann, Juan Camilo Alvarez Diaz, Ariane Gratias, Christophe Klopp, Elena Bitocchi, Valérie Geffroy, Massimo Delledonne, David Edwards, Roberto Papa
Adaptive gene loss in the common bean pan-genome during range expansion and domestication. Nature communications 15 (1) (2024)
Haifei Hu, Risheng Li, Junliang Zhao, Jacqueline Batley, David Edwards
Technological Development and Advances for Constructing and Analyzing Plant Pangenomes. Genome biology and evolution 16 (4) (2024)
Haifei Hu, Risheng Li, Junliang Zhao, Jacqueline Batley, David Edwards
Technological Development and Advances for Constructing and Analyzing Plant Pangenomes. Genome biology and evolution 16 (4) (2024)
Aamir W Khan, Vanika Garg, Shuai Sun, Saurabh Gupta, Olga Dudchenko, Manish Roorkiwal, Annapurna Chitikineni, Philipp Emanuel Bayer, Chengcheng Shi, Hari D Upadhyaya, Abhishek Bohra, Chellapilla Bharadwaj, Reyazul Rouf Mir, Kobi Baruch, Bicheng Yang, Clarice J Coyne, Kailash C Bansal, Henry T Nguyen, Gil Ronen, Erez Lieberman Aiden, Erik J Veneklaas, Kadambot H M Siddique, Xin Liu, David Edwards, Rajeev Kumar Varshney
Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature genetics (2024)
William J W Thomas, Junrey C Amas, Aria Dolatabadian, Shuanglong Huang, Fangning Zhang, Jaco D Zandberg, Ting Xiang Neik, David Edwards, Jacqueline Batley
Recent advances in the improvement of genetic resistance against disease in vegetable crops. Plant physiology (2024)
William J W Thomas, Junrey C Amas, Aria Dolatabadian, Shuanglong Huang, Fangning Zhang, Jaco D Zandberg, Ting Xiang Neik, David Edwards, Jacqueline Batley
Recent advances in the improvement of genetic resistance against disease in vegetable crops. Plant physiology 196 (1) (2024)
Aamir W Khan, Vanika Garg, Shuai Sun, Saurabh Gupta, Olga Dudchenko, Manish Roorkiwal, Annapurna Chitikineni, Philipp Emanuel Bayer, Chengcheng Shi, Hari D Upadhyaya, Abhishek Bohra, Chellapilla Bharadwaj, Reyazul Rouf Mir, Kobi Baruch, Bicheng Yang, Clarice J Coyne, Kailash C Bansal, Henry T Nguyen, Gil Ronen, Erez Lieberman Aiden, Erik J Veneklaas, Kadambot H M Siddique, Xin Liu, David Edwards, Rajeev Kumar Varshney
Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature genetics 56 (6) (2024)
Haifei Hu, Risheng Li, Junliang Zhao, Jacqueline Batley, David Edwards
Technological Development and Advances for Constructing and Analyzing Plant Pangenomes. Genome biology and evolution 16 (4) (2024)
Aamir W Khan, Vanika Garg, Shuai Sun, Saurabh Gupta, Olga Dudchenko, Manish Roorkiwal, Annapurna Chitikineni, Philipp Emanuel Bayer, Chengcheng Shi, Hari D Upadhyaya, Abhishek Bohra, Chellapilla Bharadwaj, Reyazul Rouf Mir, Kobi Baruch, Bicheng Yang, Clarice J Coyne, Kailash C Bansal, Henry T Nguyen, Gil Ronen, Erez Lieberman Aiden, Erik J Veneklaas, Kadambot H M Siddique, Xin Liu, David Edwards, Rajeev Kumar Varshney
Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature genetics 56 (6) (2024)
Mark C Derbyshire, Toby E Newman, William J W Thomas, Jacqueline Batley, David Edwards
The complex relationship between disease resistance and yield in crops. Plant biotechnology journal 22 (9) (2024)
Haifei Hu, Risheng Li, Junliang Zhao, Jacqueline Batley, David Edwards
Technological Development and Advances for Constructing and Analyzing Plant Pangenomes. Genome biology and evolution 16 (4) (2024)
Mark C Derbyshire, Toby E Newman, William J W Thomas, Jacqueline Batley, David Edwards
The complex relationship between disease resistance and yield in crops. Plant biotechnology journal 22 (9) (2024)
Benjamin John Nestor, Toby Bird, Anita Alice Severn-Ellis, Philipp Emanuel Bayer, Kosala Ranathunge, M Asaduzzaman Prodhan, Maheshi Dassanayake, Jacqueline Batley, David Edwards, Hans Lambers, Patrick Michael Finnegan
Identification and expression analysis of Phosphate Transporter 1 (PHT1) genes in the highly phosphorus-use-efficient Hakea prostrata (Proteaceae). Plant, cell & environment (2024)
Hawlader A Al-Mamun, Monica F Danilevicz, Jacob I Marsh, Cedric Gondro, David Edwards
Exploring genomic feature selection: A comparative analysis of GWAS and machine learning algorithms in a large-scale soybean dataset. The plant genome (2024)
Aamir W Khan, Vanika Garg, Shuai Sun, Saurabh Gupta, Olga Dudchenko, Manish Roorkiwal, Annapurna Chitikineni, Philipp Emanuel Bayer, Chengcheng Shi, Hari D Upadhyaya, Abhishek Bohra, Chellapilla Bharadwaj, Reyazul Rouf Mir, Kobi Baruch, Bicheng Yang, Clarice J Coyne, Kailash C Bansal, Henry T Nguyen, Gil Ronen, Erez Lieberman Aiden, Erik J Veneklaas, Kadambot H M Siddique, Xin Liu, David Edwards, Rajeev Kumar Varshney
Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature genetics (2024)
Gaia Cortinovis, Leonardo Vincenzi, Robyn Anderson, Giovanni Marturano, Jacob Ian Marsh, Philipp Emanuel Bayer, Lorenzo Rocchetti, Giulia Frascarelli, Giovanna Lanzavecchia, Alice Pieri, Andrea Benazzo, Elisa Bellucci, Valerio Di Vittori, Laura Nanni, Juan Jose Ferreira, Marzia Rossato, Orlando Mario Aguilar, Peter Laurent Morrell, Monica Rodriguez, Tania Gioia, Kerstin Neumann, Juan Camilo Alvarez Diaz, Ariane Gratias, Christophe Klopp, Elena Bitocchi, Valérie Geffroy, Massimo Delledonne, David Edwards, Roberto Papa
Adaptive gene loss in the common bean pan-genome during range expansion and domestication. Nature communications 15 (1) (2024)
Haifei Hu, Risheng Li, Junliang Zhao, Jacqueline Batley, David Edwards
Technological Development and Advances for Constructing and Analyzing Plant Pangenomes. Genome biology and evolution 16 (4) (2024)
David Edwards, Jacqueline Batley
Teatime for pangenomics. Nature plants (2023)
J I Marsh, Benjamin John Nestor, J Petereit, C G Tay Fernandez, Philipp Emanuel Bayer, J Batley, David Edwards
Legume-wide comparative analysis of pod shatter locus PDH1 reveals phaseoloid specificity, high cowpea expression and stress responsive genomic context. The Plant journal : for cell and molecular biology (2023)
Cassandria G Tay Fernandez, Philipp Emanuel Bayer, Jakob Petereit, Rajeev Kumar Varshney, Jacqueline Batley, David Edwards
The conservation of gene models can support genome annotation. The plant genome (2023)
Andrew Chen, Jiaman Sun, Guillaume Martin, Lesley-Ann Gray, Eva Hřibová, Pavla Christelová, Nabila Yahiaoui, Steve Rounsley, Rebecca Lyons, Jacqueline Batley, Ning Chen, Sharon Hamill, Subash Kumar Rai, Lachlan Coin, Brigitte Uwimana, Angelique D'Hont, Jaroslav Dolezel, David Edwards, Ronny Swennen, Elizabeth A B Aitken
Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis . Pathogens (Basel, Switzerland) 12 (2) (2023)
Andrew Chen, Jiaman Sun, Guillaume Martin, Lesley-Ann Gray, Eva Hřibová, Pavla Christelová, Nabila Yahiaoui, Steve Rounsley, Rebecca Lyons, Jacqueline Batley, Ning Chen, Sharon Hamill, Subash Kumar Rai, Lachlan Coin, Brigitte Uwimana, Angelique D'Hont, Jaroslav Dolezel, David Edwards, Ronny Swennen, Elizabeth A B Aitken
Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis . Pathogens (Basel, Switzerland) 12 (2) (2023)
Haifei Hu, Armin Scheben, Jian Wang, Fangping Li, Chengdao Li, David Edwards, Junliang Zhao
Unravelling inversions: Technological advances, challenges, and potential impact on crop breeding. Plant biotechnology journal (2023)
Andrew Chen, Jiaman Sun, Altus Viljoen, Diane Mostert, Yucong Xie, Leroy Mangila, Sheryl Bothma, Rebecca Lyons, Eva Hřibová, Pavla Christelová, Brigitte Uwimana, Delphine Amah, Stephen Pearce, Ning Chen, Jacqueline Batley, David Edwards, Jaroslav Dolezel, Peter Crisp, Allan F Brown, Guillaume Martin, Nabila Yahiaoui, Angelique D'Hont, Lachlan Coin, Ronny Swennen, Elizabeth A B Aitken
Genetic Mapping, Candidate Gene Identification and Marker Validation for Host Plant Resistance to the Race 4 of Fusarium oxysporum f. sp. cubense Using Musa acuminata ssp. malaccensis . Pathogens (Basel, Switzerland) 12 (6) (2023)
Benjamin John Nestor, Philipp Emanuel Bayer, Cassandria Geraldine Tay Fernandez, David Edwards, Patrick Michael Finnegan
Approaches to increase the validity of gene family identification using manual homology search tools. Genetica (2023)
Andrew Chen, Jiaman Sun, Guillaume Martin, Lesley-Ann Gray, Eva Hřibová, Pavla Christelová, Nabila Yahiaoui, Steve Rounsley, Rebecca Lyons, Jacqueline Batley, Ning Chen, Sharon Hamill, Subash Kumar Rai, Lachlan Coin, Brigitte Uwimana, Angelique D'Hont, Jaroslav Dolezel, David Edwards, Ronny Swennen, Elizabeth A B Aitken
Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis . Pathogens (Basel, Switzerland) 12 (2) (2023)
Muhammad Burhan Bootter, Jing Li, Wenxu Zhou, David Edwards, Jacqueline Batley
Diversity of Phytosterols in Leaves of Wild Brassicaceae Species as Compared to Brassica napus Cultivars: Potential Traits for Insect Resistance and Abiotic Stress Tolerance. Plants (Basel, Switzerland) 12 (9) (2023)
Muhammad Burhan Bootter, Jing Li, Wenxu Zhou, David Edwards, Jacqueline Batley
Diversity of Phytosterols in Leaves of Wild Brassicaceae Species as Compared to Brassica napus Cultivars: Potential Traits for Insect Resistance and Abiotic Stress Tolerance. Plants (Basel, Switzerland) 12 (9) (2023)
Andrew Chen, Jiaman Sun, Altus Viljoen, Diane Mostert, Yucong Xie, Leroy Mangila, Sheryl Bothma, Rebecca Lyons, Eva Hřibová, Pavla Christelová, Brigitte Uwimana, Delphine Amah, Stephen Pearce, Ning Chen, Jacqueline Batley, David Edwards, Jaroslav Dolezel, Peter Crisp, Allan F Brown, Guillaume Martin, Nabila Yahiaoui, Angelique D'Hont, Lachlan Coin, Ronny Swennen, Elizabeth A B Aitken
Genetic Mapping, Candidate Gene Identification and Marker Validation for Host Plant Resistance to the Race 4 of Fusarium oxysporum f. sp. cubense Using Musa acuminata ssp. malaccensis . Pathogens (Basel, Switzerland) 12 (6) (2023)
Mark Charles Derbyshire, Jacob Marsh, Soodeh Tirnaz, Henry T Nguyen, Jacqueline Batley, Philipp Emanuel Bayer, David Edwards
Diversity of fatty acid biosynthesis genes across the soybean pangenome. The plant genome (2023)
Junrey C Amas, Philipp Emanuel Bayer, Wei Hong Tan, Soodeh Tirnaz, William J W Thomas, David Edwards, Jacqueline Batley
Comparative pangenome analyses provide insights into the evolution of Brassica rapa resistance gene analogues (RGAs). Plant biotechnology journal (2023)
Andrew Chen, Jiaman Sun, Guillaume Martin, Lesley-Ann Gray, Eva Hřibová, Pavla Christelová, Nabila Yahiaoui, Steve Rounsley, Rebecca Lyons, Jacqueline Batley, Ning Chen, Sharon Hamill, Subash Kumar Rai, Lachlan Coin, Brigitte Uwimana, Angelique D'Hont, Jaroslav Dolezel, David Edwards, Ronny Swennen, Elizabeth A B Aitken
Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis . Pathogens (Basel, Switzerland) 12 (2) (2023)
Monica Furaste Danilevicz, Philipp Emanuel Bayer, Benjamin John Nestor, Mohammed Bennamoun, David Edwards
Resources for image-based high-throughput phenotyping in crops and data sharing challenges. Plant physiology 187 (2) (2022)
Gagan Garg, Lars G Kamphuis, Philipp Emanuel Bayer, Parwinder Kaur, Olga Dudchenko, Candy M Taylor, Karen M Frick, Rhonda C Foley, Ling-Ling Gao, Erez Lieberman Aiden, David Edwards, Karam B Singh
A pan-genome and chromosome-length reference genome of narrow-leafed lupin (Lupinus angustifolius) reveals genomic diversity and insights into key industry and biological traits. The Plant journal : for cell and molecular biology 111 (5) (2022)
Jakob Peteriet, Philipp Emanuel Bayer, William J W Thomas, Cassandria Geraldine Tay Fernandez, Junrey C Amas, Yueqi Zhang, Jacqueline Batley, David Edwards
Pangenomics and Crop Genome Adaptation in a Changing Climate. Plants (Basel, Switzerland) 11 (15) (2022)
Aldrin Y Cantila, William J W Thomas, Philipp Emanuel Bayer, David Edwards, Jacqueline Batley
Predicting Cloned Disease Resistance Gene Homologs (CDRHs) in Radish, Underutilised Oilseeds, and Wild Brassicaceae Species. Plants (Basel, Switzerland) 11 (22) (2022)
Aldrin Y Cantila, Ting Xiang Neik, Soodeh Tirnaz, William J W Thomas, Philipp Emanuel Bayer, David Edwards, Jacqueline Batley
Mining of Cloned Disease Resistance Gene Homologs (CDRHs) in Brassica Species and Arabidopsis thaliana . Biology 11 (6) (2022)
Jakob Peteriet, Jacob I Marsh, Philipp Emanuel Bayer, Monica Furaste Danilevicz, William J W Thomas, Jacqueline Batley, David Edwards
Genetic and Genomic Resources for Soybean Breeding Research. Plants (Basel, Switzerland) 11 (9) (2022)
David Edwards, Jacqueline Batley
Graph pangenomes find missing heritability. Nature genetics 54 (7) (2022)
Mayank Kaashyap, Sukhjiwan Kaur, Rebecca Ford, David Edwards, Kadambot H M Siddique, Rajeev Kumar Varshney, Nitin Mantri
Comprehensive transcriptomic analysis of two RIL parents with contrasting salt responsiveness identifies polyadenylated and non-polyadenylated flower lncRNAs in chickpea. Plant biotechnology journal 20 (7) (2022)
Cassandria Geraldine Tay Fernandez, Benjamin John Nestor, Monica Furaste Danilevicz, Mitchell Gill, Jakob Peteriet, Philipp Emanuel Bayer, Patrick Michael Finnegan, Jacqueline Batley, David Edwards
Pangenomes as a Resource to Accelerate Breeding of Under-Utilised Crop Species. International journal of molecular sciences 23 (5) (2022)
Parham Haddadi, Nicholas J Larkan, Angela Van deWouw, Yueqi Zhang, Ting Xiang Neik, Elena Beynon, Philipp Emanuel Bayer, David Edwards, Jacqueline Batley, Mohammad Hossein Borhan
Brassica napus genes Rlm4 and Rlm7, conferring resistance to Leptosphaeria maculans, are alleles of the Rlm9 wall-associated kinase-like resistance locus. Plant biotechnology journal 20 (7) (2022)
Cassandria Geraldine Tay Fernandez, Benjamin John Nestor, Monica Furaste Danilevicz, Jacob I Marsh, Jakob Peteriet, Philipp Emanuel Bayer, Jacqueline Batley, David Edwards
Expanding Gene-Editing Potential in Crop Improvement with Pangenomes. International journal of molecular sciences 23 (4) (2022)
Shriprabha R Upadhyaya, Philipp Emanuel Bayer, Cassandria Geraldine Tay Fernandez, Jakob Peteriet, Jacqueline Batley, Mohammed Bennamoun, Farid Boussaid, David Edwards
Evaluating Plant Gene Models Using Machine Learning. Plants (Basel, Switzerland) 11 (12) (2022)
Aria Dolatabadian, Yuxuan Yuan, Philipp Emanuel Bayer, Jakob Peteriet, Anita Alice Severn-Ellis, Soodeh Tirnaz, Dhwani Patel, David Edwards, Jacqueline Batley
Copy Number Variation among Resistance Genes Analogues in Brassica napus . Genes 13 (11) (2022)
Jacob I Marsh, Haifei Hu, Jakob Peteriet, Philipp Emanuel Bayer, Babu Valliyodan, Jacqueline Batley, Henry T Nguyen, David Edwards
Haplotype mapping uncovers unexplored variation in wild and domesticated soybean at the major protein locus cqProt-003. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 135 (4) (2022)
Jaco D Zandberg, Cassandria Geraldine Tay Fernandez, Monica Furaste Danilevicz, William J W Thomas, David Edwards, Jacqueline Batley
The Global Assessment of Oilseed Brassica Crop Species Yield, Yield Stability and the Underlying Genetics. Plants (Basel, Switzerland) 11 (20) (2022)
Mehrdad Hanifei, Amir Gholizadeh, Mostafa Khodadadi, Shaghayegh Mehravi, Mehnosh Hanifeh, David Edwards, Jacqueline Batley
Dissection of Genetic Effects, Heterosis, and Inbreeding Depression for Phytochemical Traits in Coriander. Plants (Basel, Switzerland) 11 (21) (2022)
Jakob Peteriet, Cassandria Geraldine Tay Fernandez, Jacob I Marsh, Philipp Emanuel Bayer, William J W Thomas, Aybeniz Javad Aliyeva, Miroslava Karafiátová, Jaroslav Dolezel, Jacqueline Batley, David Edwards
Isolation and Sequencing of Chromosome Arm 7RS of Rye, Secale cereale . International journal of molecular sciences 23 (19) (2022)
Philipp Emanuel Bayer, Jakob Peteriet, Éloi Durant, Cécile Monat, Mathieu Rouard, Haifei Hu, Brett Chapman, Chengdao Li, Shifeng Cheng, Jacqueline Batley, David Edwards
Wheat Panache: A pangenome graph database representing presence-absence variation across sixteen bread wheat genomes. The plant genome 15 (3) (2022)
Habib Rijzaani, Philipp Emanuel Bayer, Mathieu Rouard, Jaroslav Dolezel, Jacqueline Batley, David Edwards
The pangenome of banana highlights differences between genera and genomes. The plant genome (2021)
Philipp Emanuel Bayer, Armin Scheben, Agnieszka A Golicz, Yuxuan Yuan, Sébastien Faure, HueyTyng Lee, Harmeet Singh Chawla, Robyn Anderson, Ian Bancroft, Harsh Raman, Yong Pyo Lim, Steven Robbens, Lixi Jiang, Shengyi Liu, Michael S Barker, Michael Eric Schranz, Xiaowu Wang, Graham John King, Joseph Chris Pires, Boulos Chalhoub, Rod J Snowdon, Jacqueline Batley, David Edwards
Modelling of gene loss propensity in the pangenomes of three Brassica species suggests different mechanisms between polyploids and diploids. Plant biotechnology journal 19 (12) (2021)
Zhesi He, Ruiqin Ji, Lenka Havlickova, Lihong Wang, Yi Li, Huey Tyng Lee, Jiaming Song, Chushin Koh, Jing-Hua Yang, Mingfang Zhang, Isobel A P Parkin, Xiaowu Wang, David Edwards, Graham John King, Jun Zou, Ke-De Liu, Rod J Snowdon, Surinder Singh Banga, Ivana Machackova, Ian Bancroft
Genome structural evolution in Brassica crops. Nature plants 7 (6) (2021)
Yongle Li, Pradeep Ruperao, Jacqueline Batley, David Edwards, William Martin, Kristy Hobson, Tim Sutton
Genomic prediction of preliminary yield trials in chickpea: Effect of functional annotation of SNPs and environment. The plant genome (2021)
Junrey C Amas, Robyn Anderson, David Edwards, Wallace A Cowling, Jacqueline Batley
Status and advances in mining for blackleg (Leptosphaeria maculans) quantitative resistance (QR) in oilseed rape (Brassica napus). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 134 (10) (2021)
Peirong Li, Tongbing Su, Xiuyun Zhao, Weihong Wang, Deshuang Zhang, Yangjun Yu, Philipp Emanuel Bayer, David Edwards, Shuancang Yu, Fenglan Zhang
Assembly of the non-heading pak choi genome and comparison with the genomes of heading Chinese cabbage and the oilseed yellow sarson. Plant biotechnology journal 19 (5) (2021)
Rajeev Kumar Varshney, Abhishek Bohra, Manish Roorkiwal, Rutwik Barmukh, Wallace A Cowling, Annapurna Chitikineni, Hon Ming Lam, Lee T Hickey, Janine Croser, David Edwards, Muhammad Farooq, José Crossa, Wolfram Weckwerth, A Harvey Millar, Arvind Kumar, Michael W Bevan, Kadambot H M Siddique
Rapid delivery systems for future food security. Nature biotechnology 39 (10) (2021)
Philipp Emanuel Bayer, Jakob Peteriet, Monica Furaste Danilevicz, Robyn Anderson, Jacqueline Batley, David Edwards
The application of pangenomics and machine learning in genomic selection in plants. The plant genome 14 (3) (2021)
Haifei Hu, Armin Scheben, Brent Verpaalen, Soodeh Tirnaz, Philipp Emanuel Bayer, Richard G J Hodel, Jacqueline Batley, Douglas Edward Soltis, Pamela S Soltis, David Edwards
Amborella gene presence/absence variation is associated with abiotic stress responses that may contribute to environmental adaptation. The New phytologist (2021)
Sofie Vranken, Thomas Wernberg, Armin Scheben, Anita Alice Severn-Ellis, Jacqueline Batley, Philipp Emanuel Bayer, David Edwards, David Wheeler, Melinda Ann Coleman
Genotype-Environment mismatch of kelp forests under climate change. Molecular ecology 30 (15) (2021)
Babu Valliyodan, Anne V Brown, Juexin Wang, Gunvant Patil, Yang Liu, Paul I Otyama, Rex T Nelson, Tri Vuong, Qijian Song, Theresa A Musket, Ruth Wagner, Pradeep Marri, Sam Reddy, Allen Sessions, Xiaolei Wu, David Grant, Philipp Emanuel Bayer, Manish Roorkiwal, Rajeev Kumar Varshney, Xin Liu, David Edwards, Dong Xu, Trupti Joshi, Steven B Cannon, Henry T Nguyen
Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing. Scientific data 8 (1) (2021)
Maxime de Ronne, Parthasarathy Santhanam, Benjamin Cinget, Caroline Labbé, Amandine Lebreton, Heng Ye, Tri D Vuong, Haifei Hu, Babu Valliyodan, David Edwards, Henry T Nguyen, François Belzile, Richard R Bélanger
Mapping of partial resistance to Phytophthora sojae in soybean PIs using whole-genome sequencing reveals a major QTL. The plant genome 15 (1) (2021)
Jacob I Marsh, Haifei Hu, Mitchell Gill, Jacqueline Batley, David Edwards
Crop breeding for a changing climate: integrating phenomics and genomics with bioinformatics. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 134 (6) (2021)
Yuxuan Yuan, Philipp Emanuel Bayer, Jacqueline Batley, David Edwards
Current status of structural variation studies in plants. Plant biotechnology journal 19 (11) (2021)
Hua Yang, Nur Shuhadah Mohd Saad, Muhammad Ishaq Ibrahim, Philipp Emanuel Bayer, Ting Xiang Neik, Anita Alice Severn-Ellis, Aneeta Pradhan, Soodeh Tirnaz, David Edwards, Jacqueline Batley
Candidate Rlm6 resistance genes against Leptosphaeria. maculans identified through a genome-wide association study in Brassica juncea (L.) Czern. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 134 (7) (2021)
Philipp Emanuel Bayer, Babu Valliyodan, Haifei Hu, Jacob I Marsh, Yuxuan Yuan, Tri D Vuong, Gunvant Patil, Qijian Song, Jacqueline Batley, Rajeev Kumar Varshney, Hon Ming Lam, David Edwards, Henry T Nguyen
Sequencing the USDA core soybean collection reveals gene loss during domestication and breeding. The plant genome (2021)
Rajeev Kumar Varshney, Manish Roorkiwal, Shuai Sun, Prasad Bajaj, Annapurna Chitikineni, Mahendar Thudi, Narendra P Singh, Xiao Du, Hari D Upadhyaya, Mohammad Aamir Waseem Khan, Yue Wang, Vanika Garg, Guangyi Fan, Wallace A Cowling, José Crossa, Laurent Gentzbittel, Kai Peter Voss-Fels, Vinod Kumar Valluri, Pallavi Sinha, Vikas K Singh, Cécile Ben, Abhishek Rathore, Punna Ramu, Muneendra K Singh, Bunyamin Tar'an, Chellapilla Bharadwaj, Mohammad Yasin, Motisagar S Pithia, Servejeet Singh, Khela Ram Soren, Himabindu Kudapa, Diego Hernandez Jarquin, Philippe Cubry, Lee T Hickey, Girish Prasad Dixit, Anne-Céline Thuillet, Aladdin Hamwieh, Shiv Kumar, Amit A Deokar, Sushil K Chaturvedi, Aleena Francis, Réka Howard, Debasis Chattopadhyay, David Edwards, Eric Lyons, Yves Vigouroux, Ben John Hayes, Eric Bishop von Wettberg, Swapan K Datta, Huanming Yang, Henry T Nguyen, Jian Wang, Kadambot H M Siddique, Trilochan Mohapatra, Jeffrey L Bennetzen, Xue Liu, Xin Liu
A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature 599 (7886) (2021)
Silvia F Zanini, Philipp Emanuel Bayer, Rachel Wells, Rod J Snowdon, Jacqueline Batley, Rajeev Kumar Varshney, Henry T Nguyen, David Edwards, Agnieszka A Golicz
Pangenomics in crop improvement-from coding structural variations to finding regulatory variants with pangenome graphs. The plant genome 15 (1) (2021)
Katarzyna Gacek, Philipp Emanuel Bayer, Robyn Anderson, Anita Alice Severn-Ellis, Joanna Wolko, Agnieszka Łopatyńska, Marcin Matuszczak, Jan Bocianowski, David Edwards, Jacqueline Batley
QTL Genetic Mapping Study for Traits Affecting Meal Quality in Winter Oilseed Rape (Brassica Napus L.). Genes 12 (8) (2021)
Junliang Zhao, Philipp Emanuel Bayer, Pradeep Ruperao, Rachit K Saxena, Mohammad Aamir Waseem Khan, Agnieszka A Golicz, Henry T Nguyen, Jacqueline Batley, David Edwards, Rajeev Kumar Varshney
Trait associations in the pangenome of pigeon pea (Cajanus cajan). Plant biotechnology journal 18 (9) (2020)
Philipp Emanuel Bayer, David Edwards
Machine learning in agriculture: from silos to marketplaces. Plant biotechnology journal 19 (4) (2020)
Armin Scheben, Anita A Severn-Ellis, Dhwani Patel, Aneeta Pradhan, Stephen J Rae, Jacqueline Batley, David Edwards
Linkage mapping and QTL analysis of flowering time using ddRAD sequencing with genotype error correction in Brassica napus. BMC plant biology 20 (1) (2020)
Yueqi Zhang, William J W Thomas, Philipp Emanuel Bayer, David Edwards, Jacqueline Batley
Frontiers in Dissecting and Managing Brassica Diseases: From Reference-Based RGA Candidate Identification to Building Pan-RGAomes. International journal of molecular sciences 21 (23) (2020)
Aldrin Y Cantila, Nur Shuhadah Mohd Saad, Junrey C Amas, David Edwards, Jacqueline Batley
Recent Findings Unravel Genes and Genetic Factors Underlying Leptosphaeria maculans Resistance in Brassica napus and Its Relatives. International journal of molecular sciences 22 (1) (2020)
Yueqi Zhang, David Edwards, Jacqueline Batley
Comparison and evolutionary analysis of Brassica nucleotide binding site leucine rich repeat (NLR) genes and importance for disease resistance breeding. The plant genome 14 (1) (2020)
Hua Yang, Philipp E Bayer, Soodeh Tirnaz, David Edwards, Jacqueline Batley
Genome-Wide Identification and Evolution of Receptor-Like Kinases (RLKs) and Receptor like Proteins (RLPs) in Brassica juncea. Biology 10 (1) (2020)
Quaid Hussain, Jiaqin Shi, Armin Scheben, Jiepeng Zhan, Xinfa Wang, Guihua Liu, Guijun Yan, Graham J King, David Edwards, Hanzhong Wang
Genetic and signalling pathways of dry fruit size: targets for genome editing-based crop improvement. Plant biotechnology journal 18 (5) (2020)
Philipp Emanuel Bayer, Agnieszka A Golicz, Armin Scheben, Jacqueline Batley, David Edwards
Plant pan-genomes are the new reference. Nature plants 6 (8) (2020)
Soodeh Tirnaz, Philipp Emanuel Bayer, Fabian Inturrisi, Fangning Zhang, Hua Yang, Aria Dolatabadian, Ting X Neik, Anita Alice Severn-Ellis, Dhwani A Patel, Muhammad Ishaq Ibrahim, Aneeta Pradhan, David Edwards, Jacqueline Batley
Resistance Gene Analogs in the Brassicaceae: Identification, Characterization, Distribution, and Evolution. Plant physiology 184 (2) (2020)
Agnieszka A Golicz, Prem L Bhalla, David Edwards, Mohan B Singh
Rice 3D chromatin structure correlates with sequence variation and meiotic recombination rate. Communications biology 3 (1) (2020)
Ting Xiang Neik, Junrey Amas, Martin Barbetti, David Edwards, Jacqueline Batley
Understanding Host-Pathogen Interactions in Brassica napus in the Omics Era. Plants (Basel, Switzerland) 9 (10) (2020)
Rajeev Kumar Varshney, Mahendar Thudi, Manish Roorkiwal, Wei-Ming He, Hari D Upadhyaya, Wei Yang, Prasad Bajaj, Philippe Cubry, Abhishek Rathore, Jianbo Jian, Dadakhalandar Doddamani, Mohammad Aamir Waseem Khan, Vanika Garg, Annapurna Chitikineni, Dawen Xu, Pooran M Gaur, Narendra P Singh, Sushil K Chaturvedi, Gangarao V P R Nadigatla, Lakshmanan Krishnamurthy, G P Dixit, Asnake Fikre, Paul K Kimurto, Sheshshayee M Sreeman, Chellapilla Bharadwaj, Shailesh Tripathi, Jun Wang, Suk-Ha Lee, David Edwards, Kavi Kishor Bilhan Polavarapu, R Varma Penmetsa, José Crossa, Henry T Nguyen, Kadambot H M Siddique, Timothy D Colmer, Tim Sutton, Eric Bishop von Wettberg, Yves Vigouroux, Xue Liu, Xin Liu
Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature genetics 51 (5) (2019)
Jonathan Kreplak, Mohammed-Amin Madoui, Petr Cápal, Petr Novák, Karine Labadie, Grégoire Aubert, Philipp Emanuel Bayer, Krishna K Gali, Robert A Syme, Dorrie Main, Anthony Klein, Aurélie Bérard, Iva Vrbová, Cyril Fournier, Leo d'Agata, Caroline Belser, Wahiba Berrabah, Helena Toegelová, Zbyněk Milec, Jan Vrána, HueyTyng Lee, Ayité Kougbeadjo, Morgane Térézol, Cécile Huneau, Chala J Turo, Nacer Mohellibi, Pavel Neumann, Matthieu Falque, Karine Gallardo, Rebecca McGee, Bunyamin Tar'an, Abdelhafid Bendahmane, Jean-Marc Aury, Jacqueline Batley, Marie-Christine Le Paslier, T H Noel Ellis, Thomas D Warkentin, Clarice J Coyne, Jérome Salse, David Edwards, Judith Lichtenzveig, Jiří Macas, Jaroslav Dolezel, Patrick Wincker, Judith Burstin
A reference genome for pea provides insight into legume genome evolution. Nature genetics 51 (9) (2019)
Kewei Feng, Licao Cui, Le Wang, Dai Shan, Wei Tong, Pingchuan Deng, Zhaogui Yan, Mengxing Wang, Haoshuang Zhan, Xiaotong Wu, Weiming He, Xianqiang Zhou, Jingjing Ji, Guiping Zhang, Long Mao, Miroslava Karafiátová, Hana Šimková, Jaroslav Dolezel, Xianghong Du, Shancen Zhao, Ming-Cheng Luo, Dejun Han, Chi Zhang, Zhensheng Kang, Rudi Appels, David Edwards, Xiaojun Nie, Song Weining
The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat. Plant biotechnology journal 18 (3) (2019)
Aria Dolatabadian, Philipp Emanuel Bayer, Soodeh Tirnaz, Bhavna Hurgobin, David Edwards, Jacqueline Batley
Characterization of disease resistance genes in the Brassica napus pangenome reveals significant structural variation. Plant biotechnology journal 18 (4) (2019)
Amy Watson, Sreya Ghosh, Matthew J Williams, William S Cuddy, James Simmonds, María-Dolores Rey, Muhammad Asyraf Md Hatta, Alison Hinchliffe, Andrew Steed, Daniel Reynolds, Nikolai M Adamski, Andy Breakspear, Andrey Korolev, Tracey Rayner, Laura E Dixon, Adnan Riaz, William Martin, Merrill Ryan, David Edwards, Jacqueline Batley, Harsh Raman, Jeremy Carter, Christian Rogers, Claire Domoney, Graham Moore, Wendy Harwood, Paul Nicholson, Mark J Dieters, Ian H DeLacy, Ji Zhou, Cristobal Uauy, Scott A Boden, Robert F Park, Brande B H Wulff, Lee T Hickey
Speed breeding is a powerful tool to accelerate crop research and breeding. Nature plants 4 (1) (2018)
Philipp Emanuel Bayer, Agnieszka A Golicz, Soodeh Tirnaz, Chon-Kit Kenneth Chan, David Edwards, Jacqueline Batley
Variation in abundance of predicted resistance genes in the Brassica oleracea pangenome. Plant biotechnology journal 17 (4) (2018)
Armin Scheben, David Edwards
Bottlenecks for genome-edited crops on the road from lab to farm. Genome biology 19 (1) (2018)
Bhavna Hurgobin, Agnieszka A Golicz, Philipp Emanuel Bayer, Chon-Kit Kenneth Chan, Soodeh Tirnaz, Aria Dolatabadian, Sarah V Schießl, Birgit Samans, Juan D Montenegro, Isobel A P Parkin, J Chris Pires, Boulos Chalhoub, Graham J King, Rod Snowdon, Jacqueline Batley, David Edwards
Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus. Plant biotechnology journal 16 (7) (2018)
Mayank Kaashyap, Rebecca Ford, Himabindu Kudapa, Mukesh Jain, David Edwards, Rajeev Kumar Varshney, Nitin Mantri
Differential Regulation of Genes Involved in Root Morphogenesis and Cell Wall Modification is Associated with Salinity Tolerance in Chickpea. Scientific reports 8 (1) (2018)
Philipp Emanuel Bayer, David Edwards, Jacqueline Batley
Bias in resistance gene prediction due to repeat masking. Nature plants 4 (10) (2018)

David Edwards.css-eqlu8i{font-size:small;padding-left:4px;} (D Edwards, Dave Edwards)

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David Edwards (D Edwards, Dave Edwards)