David M Reif (David Reif)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 33

Top Venues

Toxics

Journal of immunotoxicology

Cells

International journal of environmental research and public health

North Carolina State University

Vanderbilt University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

North Carolina State University Aug 01 2020

United States

Professor :: Bioinformatics Research Center & Department of Biological Sciences

North Carolina State University - Jul 31 2020

United States

Associate Professor :: Bioinformatics Research Center & Department of Biological Sciences

US Environmental Protection Agency

United States

Principal Investigator (Statistician) :: National Center for Computational Toxicology

US Environmental Protection Agency

United States

Postdoc (Biologist) :: National Center for Computational Toxicology

Education History

Vanderbilt University

United States

PHD :: Human Genetics

Vanderbilt University

United States

MSC :: Applied Statistics

College of William and Mary

United States

BSC :: Biology

Publications

Adrian J Green, Lisa Truong, Preethi Thunga, Connor Leong, Melody Hancock, Robyn L Tanguay, David M Reif
Deep autoencoder-based behavioral pattern recognition outperforms standard statistical methods in high-dimensional zebrafish studies. PLoS computational biology 20 (9) (2024)
Hannah M Starnes, Adrian J Green, David M Reif, Scott M Belcher
An in vitro and machine learning framework for quantifying serum albumin binding of per- and polyfluoroalkyl substances. Toxicological sciences : an official journal of the Society of Toxicology (2024)
George W Small, Farida S Akhtari, Adrian J Green, Tammy M Havener, Michael Sikes, Julia Coelho França Quintanilha, Ricardo D Gonzalez, David M Reif, Alison A Motsinger-Reif, Howard L McLeod, Tim Wiltshire
Pharmacogenomic Analyses Implicate B Cell Developmental Status and MKL1 as Determinants of Sensitivity toward Anti-CD20 Monoclonal Antibody Therapy. Cells 12 (12) (2023)
George W Small, Farida S Akhtari, Adrian J Green, Tammy M Havener, Michael Sikes, Julia Coelho França Quintanilha, Ricardo D Gonzalez, David M Reif, Alison A Motsinger-Reif, Howard L McLeod, Tim Wiltshire
Pharmacogenomic Analyses Implicate B Cell Developmental Status and MKL1 as Determinants of Sensitivity toward Anti-CD20 Monoclonal Antibody Therapy. Cells 12 (12) (2023)
Ricardo D Gonzalez, George W Small, Adrian J Green, Farida S Akhtari, Tammy M Havener, Julia Coelho França Quintanilha, Amber B Cipriani, David M Reif, Howard L McLeod, Alison A Motsinger-Reif, Tim Wiltshire
RYK Gene Expression Associated with Drug Response Variation of Temozolomide and Clinical Outcomes in Glioma Patients. Pharmaceuticals (Basel, Switzerland) 16 (5) (2023)
Bora Jin, David B Dunson, Julia E Rager, David M Reif, Stephanie M Engel, Amy H Herring
Bayesian matrix completion for hypothesis testing. Journal of the Royal Statistical Society. Series C, Applied statistics 72 (2) (2023)
Ricardo D Gonzalez, George W Small, Adrian J Green, Farida S Akhtari, Alison A Motsinger-Reif, Julia Coelho França Quintanilha, Tammy M Havener, David M Reif, Howard L McLeod, Tim Wiltshire
MKX-AS1 Gene Expression Associated with Variation in Drug Response to Oxaliplatin and Clinical Outcomes in Colorectal Cancer Patients. Pharmaceuticals (Basel, Switzerland) 16 (5) (2023)
Drake W Phelps, Anika I Palekar, Haleigh E Conley, Giuliano Ferrero, Jacob H Driggers, Keith E Linder, Seth W Kullman, David M Reif, Mary Katherine Sheats, Jamie C DeWitt, Jeffrey A Yoder
Legacy and emerging per- and polyfluoroalkyl substances suppress the neutrophil respiratory burst. Journal of immunotoxicology 20 (1) (2023)
Bora Jin, David B Dunson, Julia E Rager, David M Reif, Stephanie M Engel, Amy H Herring
Bayesian matrix completion for hypothesis testing. Journal of the Royal Statistical Society. Series C, Applied statistics 72 (2) (2023)
Jessie R Chappel, Mary E King, Jonathon Fleming, Livia Schiavinato Eberlin, David M Reif, Erin S Baker
Utilizing Aggregated Molecular Phenotype (AMP) Scores to Visualize Simultaneous Molecular Changes in Mass Spectrometry Imaging Data. bioRxiv : the preprint server for biology (2023)
Drake W Phelps, Anika I Palekar, Haleigh E Conley, Giuliano Ferrero, Jacob H Driggers, Keith E Linder, Seth W Kullman, David M Reif, Mary Katherine Sheats, Jamie C DeWitt, Jeffrey A Yoder
Legacy and emerging per- and polyfluoroalkyl substances suppress the neutrophil respiratory burst. Journal of immunotoxicology 20 (1) (2023)
George W Small, Farida S Akhtari, Adrian J Green, Tammy M Havener, Michael Sikes, Julia Coelho França Quintanilha, Ricardo D Gonzalez, David M Reif, Alison A Motsinger-Reif, Howard L McLeod, Tim Wiltshire
Pharmacogenomic Analyses Implicate B Cell Developmental Status and MKL1 as Determinants of Sensitivity toward Anti-CD20 Monoclonal Antibody Therapy. Cells 12 (12) (2023)
Adrian J Green, Lisa Truong, Preethi Thunga, Connor Leong, Melody Hancock, Robert L Tanguay, David M Reif
Deep autoencoder-based behavioral pattern recognition outperforms standard statistical methods in high-dimensional zebrafish studies. bioRxiv : the preprint server for biology (2023)
Preethi Thunga, Lisa Truong, Yvonne Rericha, Jane La Du, Mackenzie Morshead, Robert L Tanguay, David M Reif
Utilizing a Population-Genetic Framework to Test for Gene-Environment Interactions between Zebrafish Behavior and Chemical Exposure. Toxics 10 (12) (2022)
Preethi Thunga, Lisa Truong, Yvonne Rericha, Jane La Du, Mackenzie Morshead, Robert L Tanguay, David M Reif
Utilizing a Population-Genetic Framework to Test for Gene-Environment Interactions between Zebrafish Behavior and Chemical Exposure. Toxics 10 (12) (2022)
Prarthana Shankar, Gloria R Garcia, Jane K La Du, Christopher M Sullivan, Cheryl L Dunham, Britton C Goodale, Katrina M Waters, Stanislau Stanisheuski, Claudia S Maier, Preethi Thunga, David M Reif, Robert L Tanguay
The Ahr2-Dependent wfikkn1 Gene Influences Zebrafish Transcriptome, Proteome, and Behavior. Toxicological sciences : an official journal of the Society of Toxicology 187 (2) (2022)
Preethi Thunga, Lisa Truong, Yvonne Rericha, Jane La Du, Mackenzie Morshead, Robert L Tanguay, David M Reif
Utilizing a Population-Genetic Framework to Test for Gene-Environment Interactions between Zebrafish Behavior and Chemical Exposure. Toxics 10 (12) (2022)
Preethi Thunga, Lisa Truong, Yvonne Rericha, Jane La Du, Mackenzie Morshead, Robert L Tanguay, David M Reif
Utilizing a Population-Genetic Framework to Test for Gene-Environment Interactions between Zebrafish Behavior and Chemical Exposure. Toxics 10 (12) (2022)
Amy F Wolkin, Sarah Collier, John S House, David M Reif, Alison Motsinger-Reif, Lindsey Duca, J Danielle Sharpe
Comparison of National Vulnerability Indices Used by the Centers for Disease Control and Prevention for the COVID-19 Response. Public health reports (Washington, D.C. : 1974) 137 (4) (2022)
Preethi Thunga, Lisa Truong, Yvonne Rericha, Jane La Du, Mackenzie Morshead, Robert L Tanguay, David M Reif
Utilizing a Population-Genetic Framework to Test for Gene-Environment Interactions between Zebrafish Behavior and Chemical Exposure. Toxics 10 (12) (2022)
Drake W Phelps, Ashley A Fletcher, Ivan Rodriguez-Nunez, Michele R Balik-Meisner, Debra A Tokarz, David M Reif, Dori R Germolec, Jeffrey A Yoder
In vivo assessment of respiratory burst inhibition by xenobiotic exposure using larval zebrafish. Journal of immunotoxicology 17 (1) (2021)
Farida S Akhtari, Adrian J Green, George W Small, Tammy M Havener, John S House, Kyle R Roell, David M Reif, Howard L McLeod, Timothy Wiltshire, Allison A Motsinger-Reif
High-throughput screening and genome-wide analyses of 44 anticancer drugs in the 1000 Genomes cell lines reveals an association of the NQO1 gene with the response of multiple anticancer drugs. PLoS genetics 17 (8) (2021)
Adrian J Green, Martin J Mohlenkamp, Jhuma Das, Meenal Chaudhari, Lisa Truong, Robert L Tanguay, David M Reif
Leveraging high-throughput screening data, deep neural networks, and conditional generative adversarial networks to advance predictive toxicology. PLoS computational biology 17 (7) (2021)
Adrian J Green, Benedict Anchang, Farida S Akhtari, David M Reif, Allison A Motsinger-Reif
Extending the lymphoblastoid cell line model for drug combination pharmacogenomics. Pharmacogenomics 22 (9) (2021)
Dylan J Wallis, Lisa Truong, Jane La Du, Robert L Tanguay, David M Reif
Uncovering Evidence for Endocrine-Disrupting Chemicals That Elicit Differential Susceptibility through Gene-Environment Interactions. Toxics 9 (4) (2021)
Jonathon Fleming, Skylar W Marvel, Alison A Motsinger-Reif, David M Reif
ToxPi*GIS Toolkit: Creating, viewing, and sharing integrative visualizations for geospatial data using ArcGIS. medRxiv : the preprint server for health sciences (2021)
Pamela O Gilchrist, Alonzo B Alexander, Adrian J Green, Frieda E Sanders, Ashley Q Hooker, David M Reif
Development of a Pandemic Awareness STEM Outreach Curriculum: Utilizing a Computational Thinking Taxonomy Framework. Education sciences 11 (3) (2021)
Sharmila Bhandari, P Grace Tee Lewis, Elena Craft, Skylar W Marvel, David M Reif, Weihsueh A Chiu
HGBEnviroScreen: Enabling Community Action through Data Integration in the Houston-Galveston-Brazoria Region. International journal of environmental research and public health 17 (4) (2020)
Elaine A Cohen Hubal, David M Reif, Rachel Slover, Ashley Mullikin, John C Little
Children's Environmental Health: A Systems Approach for Anticipating Impacts from Chemicals. International journal of environmental research and public health 17 (22) (2020)
Debabrata Mahapatra, Jill A Franzosa, Kyle Roell, Melaine Agnes Kuenemann, Keith A Houck, David M Reif, Denis Fourches, Seth W Kullman
Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays. Scientific reports 8 (1) (2018)
Kimberly T To, Rebecca C Fry, David M Reif
Characterizing the effects of missing data and evaluating imputation methods for chemical prioritization applications using ToxPi. BioData mining 11 (2018)
Michele Balik-Meisner, Lisa Truong, Elizabeth H Scholl, Robert L Tanguay, David M Reif
Population genetic diversity in zebrafish lines. Mammalian genome : official journal of the International Mammalian Genome Society 29 (1-2) (2018)
Guozhu Zhang, Lisa Truong, Robert L Tanguay, David M Reif
A New Statistical Approach to Characterize Chemical-Elicited Behavioral Effects in High-Throughput Studies Using Zebrafish. PloS one 12 (1) (2017)
David M Reif, Lisa Truong, David Mandrell, Skylar Marvel, Guozhu Zhang, Robert L Tanguay
High-throughput characterization of chemical-associated embryonic behavioral changes predicts teratogenic outcomes. Archives of toxicology 90 (6) (2015)

David M Reif.css-eqlu8i{font-size:small;padding-left:4px;} (David Reif)

Publication Activity (10 Years)

Top Topics

Top Venues

David M Reif (David Reif)