Erin S Baker

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 89

Top Venues

Analytical chemistry

Journal of proteome research

Nature metabolism

Journal of the American Society for Mass Spectrometry

NC State University

University of California Santa Barbara (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

NC State University

United States

Associate Professor :: Chemistry

Pacific Northwest National Laboratory Feb 13 2006

United States

Senior Research Scientist :: Biological Sciences Division

Education History

University of California Santa Barbara

United States

PHD :: Chemistry

Montana State University Bozeman

United States

BSC :: Chemistry

Publications

Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
Publisher Correction: METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism (2024)
Melanie T Odenkirk, Xueyun Zheng, Jennifer E Kyle, Kelly G Stratton, Carrie D Nicora, Kent J Bloodsworth, Catriona A Mclean, Colin L Masters, Matthew E Monroe, James D Doecke, Richard D Smith, Kristin E Burnum-Johnson, Blaine R Roberts, Erin S Baker
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. Journal of proteome research (2024)
Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism (2024)
Rebecca A Weed, Grace Campbell, Lacey Brown, Katlyn May, Dana Sargent, Emily Sutton, Kemp Burdette, Wayne Rider, Erin S Baker, Jeffrey R Enders
Non-Targeted PFAS Suspect Screening and Quantification of Drinking Water Samples Collected through Community Engaged Research in North Carolina's Cape Fear River Basin. Toxics 12 (6) (2024)
Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism 6 (6) (2024)
Sandip Kumar Patel, Joanna Bons, Jacob P Rose, Jessie R Chappel, Rebecca L Beres, Mark A Watson, Corey Webster, Jordan B Burton, Roland Bruderer, Pierre-Yves Desprez, Lukas Reiter, Judith Campisi, Erin S Baker, Birgit Schilling
Exosomes Released from Senescent Cells and Circulatory Exosomes Isolated from Human Plasma Reveal Aging-associated Proteomic and Lipid Signatures. bioRxiv : the preprint server for biology (2024)
Amie M Solosky, Iliana M Claudio, Jessie R Chappel, Kaylie I Kirkwood, Michael G Janech, Alison M Bland, Frances M D Gulland, Benjamin A Neely, Erin S Baker
Proteomic and Lipidomic Plasma Evaluations Reveal Biomarkers for Domoic Acid Toxicosis in California Sea Lions. bioRxiv : the preprint server for biology (2024)
Melanie T Odenkirk, Xueyun Zheng, Jennifer E Kyle, Kelly G Stratton, Carrie D Nicora, Kent J Bloodsworth, Catriona A Mclean, Colin L Masters, Matthew E Monroe, James D Doecke, Richard D Smith, Kristin E Burnum-Johnson, Blaine R Roberts, Erin S Baker
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. Journal of proteome research (2024)
Yamini V Virkud, Jennifer N Styles, Rachel S Kelly, Sarita Ulhas Patil, Bert Ruiter, Neal P Smith, Andrew T Chan, Craig E Wheelock, Juan C Celedón, Augusto A Litonjua, Supinda Bunyavanich, Scott T Weiss, Erin S Baker, Jessica A Lasky-Su, Wayne G Shreffler
Metabolomics of IgE-Mediated Food Allergy and Oral Immunotherapy Outcomes based on Metabolomic Profiling. medRxiv : the preprint server for health sciences (2024)
Melanie T Odenkirk, Xueyun Zheng, Jennifer E Kyle, Kelly G Stratton, Carrie D Nicora, Kent J Bloodsworth, Catriona A Mclean, Colin L Masters, Matthew E Monroe, James D Doecke, Richard D Smith, Kristin E Burnum-Johnson, Blaine R Roberts, Erin S Baker
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. Journal of proteome research 23 (8) (2024)
Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism (2024)
Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism (2024)
Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism (2024)
Anna K Boatman, Jessie R Chappel, Madison E Polera, James N Dodds, Scott M Belcher, Erin S Baker
Assessing Per- and Polyfluoroalkyl Substances in Fish Fillet Using Non-Targeted Analyses. Environmental science & technology 58 (32) (2024)
Jessie R Chappel, Kaylie I Kirkwood, James N Dodds, Jonathon Fleming, David M Reif, Erin S Baker
Streamlining Phenotype Classification and Highlighting Feature Candidates: A Screening Method for Non-Targeted Ion Mobility Spectrometry-Mass Spectrometry (IMS-MS) Data. Analytical chemistry (2024)
Melanie T Odenkirk, Xueyun Zheng, Jennifer E Kyle, Kelly G Stratton, Carrie D Nicora, Kent J Bloodsworth, Catriona A Mclean, Colin L Masters, Matthew E Monroe, James D Doecke, Richard D Smith, Kristin E Burnum-Johnson, Blaine R Roberts, Erin S Baker
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. Journal of proteome research (2024)
Martin A Giera, Aries Aisporna, Winnie Uritboonthai, Linh Hoang, Rico J E Derks, Kara M Joseph, Erin S Baker, Gary E Siuzdak
XCMS-METLIN: data-driven metabolite, lipid, and chemical analysis. Molecular systems biology (2024)
Rebecca A Weed, Grace Campbell, Lacey Brown, Katlyn May, Dana Sargent, Emily Sutton, Kemp Burdette, Wayne Rider, Erin S Baker, Jeffrey R Enders
Non-Targeted PFAS Suspect Screening and Quantification of Drinking Water Samples Collected through Community Engaged Research in North Carolina's Cape Fear River Basin. Toxics 12 (6) (2024)
Anna K Boatman, Jessie R Chappel, Madison E Polera, James N Dodds, Scott M Belcher, Erin S Baker
Assessing Per- and Polyfluoroalkyl Substances in Fish Fillet Using Non-Targeted Analyses. Environmental science & technology (2024)
Melanie T Odenkirk, Xueyun Zheng, Jennifer E Kyle, Kelly G Stratton, Carrie D Nicora, Kent J Bloodsworth, Catriona A Mclean, Colin L Masters, Matthew E Monroe, James D Doecke, Richard D Smith, Kristin E Burnum-Johnson, Blaine R Roberts, Erin S Baker
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. Journal of proteome research 23 (8) (2024)
Rebecca A Weed, Grace Campbell, Lacey Brown, Katlyn May, Dana Sargent, Emily Sutton, Kemp Burdette, Wayne Rider, Erin S Baker, Jeffrey R Enders
Non-Targeted PFAS Suspect Screening and Quantification of Drinking Water Samples Collected through Community Engaged Research in North Carolina's Cape Fear River Basin. Toxics 12 (6) (2024)
Melanie T Odenkirk, Xueyun Zheng, Jennifer E Kyle, Kelly G Stratton, Carrie D Nicora, Kent J Bloodsworth, Catriona A Mclean, Colin L Masters, Matthew E Monroe, James D Doecke, Richard D Smith, Kristin E Burnum-Johnson, Blaine R Roberts, Erin S Baker
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. Journal of proteome research (2024)
Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism 6 (6) (2024)
Melanie T Odenkirk, Xueyun Zheng, Jennifer E Kyle, Kelly G Stratton, Carrie D Nicora, Kent J Bloodsworth, Catriona A Mclean, Colin L Masters, Matthew E Monroe, James D Doecke, Richard D Smith, Kristin E Burnum-Johnson, Blaine R Roberts, Erin S Baker
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. Journal of proteome research 23 (8) (2024)
Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism 6 (6) (2024)
Erin S Baker, Winnie Uritboonthai, Aries Aisporna, Corey Hoang, Heino M Heyman, Lisa Connell, Damien Olivier-Jimenez, Martin A Giera, Gary E Siuzdak
Publisher Correction: METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification. Nature metabolism (2024)
Anna K Boatman, Jessie R Chappel, Madison E Polera, James N Dodds, Scott M Belcher, Erin S Baker
Assessing Per- and Polyfluoroalkyl Substances in Fish Fillet Using Non-Targeted Analyses. Environmental science & technology (2024)
Sandip Kumar Patel, Joanna Bons, Jacob P Rose, Jessie R Chappel, Rebecca L Beres, Mark A Watson, Corey Webster, Jordan B Burton, Roland Bruderer, Pierre-Yves Desprez, Lukas Reiter, Judith Campisi, Erin S Baker, Birgit Schilling
Exosomes Released from Senescent Cells and Circulatory Exosomes Isolated from Human Plasma Reveal Aging-associated Proteomic and Lipid Signatures. bioRxiv : the preprint server for biology (2024)
Melanie T Odenkirk, Xueyun Zheng, Jennifer E Kyle, Kelly G Stratton, Carrie D Nicora, Kent J Bloodsworth, Catriona A Mclean, Colin L Masters, Matthew E Monroe, James D Doecke, Richard D Smith, Kristin E Burnum-Johnson, Blaine R Roberts, Erin S Baker
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. Journal of proteome research (2024)
Kaylie I Kirkwood, James N Dodds, Astrid Schnetzer, Nathan S Hall, Erin S Baker
Uncovering per- and polyfluoroalkyl substances (PFAS) with nontargeted ion mobility spectrometry-mass spectrometry analyses. Science advances 9 (43) (2023)
Jessie R Chappel, Mary E King, Jonathon Fleming, Livia Schiavinato Eberlin, David M Reif, Erin S Baker
Aggregated Molecular Phenotype Scores: Enhancing Assessment and Visualization of Mass Spectrometry Imaging Data for Tissue-Based Diagnostics. Analytical chemistry (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Alexandra C Cordova, William D Klaren, Lucie C Ford, Fabian A Grimm, Erin S Baker, Yi-Hui Zhou, Fred A Wright, Ivan Rusyn
Integrative Chemical-Biological Grouping of Complex High Production Volume Substances from Lower Olefin Manufacturing Streams. Toxics 11 (7) (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Yun Zhu, Melanie T Odenkirk, Pei Qiao, Tianqi Zhang, Samantha Schrecke, Ming Zhou, Michael Thomas Marty, Erin S Baker, Arthur D Laganowsky
Combining native mass spectrometry and lipidomics to uncover specific membrane protein-lipid interactions from natural lipid sources. Chemical science 14 (32) (2023)
Anna K Boatman, Jessie R Chappel, Madison E Polera, James N Dodds, Scott M Belcher, Erin S Baker
Assessing Per- and Polyfluoroalkyl Substances (PFAS) in Fish Fillet Using Non-Targeted Analyses. bioRxiv : the preprint server for biology (2023)
Matthew H Foley, Morgan E Gibbs, Allison K Stewart, Sarah O'Flaherty, Emily C Gentry, Shakshi Patel, Violet V Beaty, Garrison Allen, Meichen Pan, Joshua B Simpson, Caroline Perkins, Molly E Vanhoy, Michael K Dougherty, Sarah K McGill, Ajay S Gulati, Pieter C Dorrestein, Erin S Baker, Matthew R Redinbo, Rodolphe Barrangou, Casey M Theriot
Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut. Nature microbiology (2023)
Jack P Ryan, Marius M Kostelic, Chih-Chieh Hsieh, Joshua Powers, Craig Aspinwall, James N Dodds, John E Schiel, Michael Thomas Marty, Erin S Baker
Characterizing Adeno-Associated Virus Capsids with Both Denaturing and Intact Analysis Methods. Journal of the American Society for Mass Spectrometry (2023)
Jessie R Chappel, Mary E King, Jonathon Fleming, Livia Schiavinato Eberlin, David M Reif, Erin S Baker
Utilizing Aggregated Molecular Phenotype (AMP) Scores to Visualize Simultaneous Molecular Changes in Mass Spectrometry Imaging Data. bioRxiv : the preprint server for biology (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Emily C Gentry, Stephanie L Collins, Morgan Panitchpakdi, Pedro Belda Ferre, Allison K Stewart, Marvic Carrillo Terrazas, Hsueh-Han Lu, Simone Zuffa, Tingting Yan, Julian Avila Pacheco, Damian Rafal Plichta, Allegra T Aron, Mingxun Wang, Alan K Jarmusch, Fuhua Hao, Mashette Syrkin-Nikolau, Hera Vlamakis, Ashwin N Ananthakrishnan, Brigid Boland, Amy Hemperly, Niels Vande Casteele, Frank J Gonzalez, Andrew T Chan, Ramnik J Xavier, Hiutung Chu, Erin S Baker, Andrew D Patterson, Rob Knight, Dionicio Siegel, Pieter C Dorrestein
Reverse metabolomics for the discovery of chemical structures from humans. Nature (2023)
Erin S Baker, Corey Hoang, Winnie Uritboonthai, Heino M Heyman, Brian S Pratt, Michael J MacCoss, Brendan MacLean, Robert Plumb, Aries Aisporna, Gary E Siuzdak
METLIN-CCS: an ion mobility spectrometry collision cross section database. Nature methods (2023)
Allison K Stewart, Matthew H Foley, Michael K Dougherty, Sarah K McGill, Ajay S Gulati, Emily C Gentry, Lee R Hagey, Pieter C Dorrestein, Casey M Theriot, James N Dodds, Erin S Baker
Using Multidimensional Separations to Distinguish Isomeric Amino Acid-Bile Acid Conjugates and Assess Their Presence and Perturbations in Model Systems. Analytical chemistry (2023)
Yun Zhu, Samantha Schrecke, Shuli Tang, Melanie T Odenkirk, Thomas Walker, Lauren Stover, Jixing Lyu, Tianqi Zhang, David H Russell, Erin S Baker, Xin Yan, Arthur D Laganowsky
Cupric Ions Selectively Modulate TRAAK-Phosphatidylserine Interactions. Journal of the American Chemical Society 144 (16) (2022)
Karen E Butler, James N Dodds, Tawnya G Flick, Iain D G Campuzano, Erin S Baker
High-Resolution Demultiplexing (HRdm) Ion Mobility Spectrometry-Mass Spectrometry for Aspartic and Isoaspartic Acid Determination and Screening. Analytical chemistry 94 (16) (2022)
Michael G Doyle, Melanie T Odenkirk, Allison K Stewart, Jacob P Nelson, Erin S Baker, Florentino B De La Cruz
Assessing the Fate of Dissolved Organic Compounds in Landfill Leachate and Wastewater Treatment Systems. ACS ES&T water 2 (12) (2022)
Markace A Rainey, Chandler A Watson, Carter K Asef, Makayla R Foster, Erin S Baker, Facundo M Fernández
CCS Predictor 2.0: An Open-Source Jupyter Notebook Tool for Filtering Out False Positives in Metabolomics. Analytical chemistry (2022)
Michael G Doyle, Melanie T Odenkirk, Allison K Stewart, Jacob P Nelson, Erin S Baker, Florentino B De La Cruz
Assessing the Fate of Dissolved Organic Compounds in Landfill Leachate and Wastewater Treatment Systems. ACS ES&T water 2 (12) (2022)
Kaylie I Kirkwood, Brian S Pratt, Nicholas Shulman, Kaipo Tamura, Michael J MacCoss, Brendan X MacLean, Erin S Baker
Utilizing Skyline to analyze lipidomics data containing liquid chromatography, ion mobility spectrometry and mass spectrometry dimensions. Nature protocols 17 (11) (2022)
Kaylie I Kirkwood, Jonathon Fleming, Helen Nguyen, David M Reif, Erin S Baker, Scott M Belcher
Utilizing Pine Needles to Temporally and Spatially Profile Per- and Polyfluoroalkyl Substances (PFAS). Environmental science & technology 56 (6) (2022)
Marius M Kostelic, Chih-Chieh Hsieh, Henry M Sanders, Ciara K Zak, Jack P Ryan, Erin S Baker, Craig A Aspinwall, Michael Thomas Marty
Surface Modified Nano-Electrospray Needles Improve Sensitivity for Native Mass Spectrometry. Journal of the American Society for Mass Spectrometry 33 (6) (2022)
Marius M Kostelic, Jack P Ryan, Levi S Brown, Tyler W Jackson, Chih-Chieh Hsieh, Ciara K Zak, Henry M Sanders, Yang Liu, Victor Shugui Chen, Michael Byrne, Craig A Aspinwall, Erin S Baker, Michael Thomas Marty
Stability and Dissociation of Adeno-Associated Viral Capsids by Variable Temperature-Charge Detection-Mass Spectrometry. Analytical chemistry 94 (34) (2022)
Karen E Butler, Erin S Baker
A High-Throughput Ion Mobility Spectrometry-Mass Spectrometry Screening Method for Opioid Profiling. Journal of the American Society for Mass Spectrometry 33 (10) (2022)
Evelyn Rampler, Erin S Baker, Kaylie I Kirkwood, Michaela Schwaiger-Haber, Maggie Tam, Marissa A Jones, Melissa Sherman
Empowering women and addressing underrepresentation in the field of mass spectrometry. Expert review of proteomics 19 (1) (2022)
James N Dodds, Lingjue Wang, Gary J Patti, Erin S Baker
Combining Isotopologue Workflows and Simultaneous Multidimensional Separations to Detect, Identify, and Validate Metabolites in Untargeted Analyses. Analytical chemistry 94 (5) (2022)
Michael G Doyle, Melanie T Odenkirk, Allison K Stewart, Jacob P Nelson, Erin S Baker, Florentino B De La Cruz
Assessing the Fate of Dissolved Organic Compounds in Landfill Leachate and Wastewater Treatment Systems. ACS ES&T water 2 (12) (2022)
Alan Valdiviezo, Yuki Kato, Erin S Baker, Weihsueh A Chiu, Ivan Rusyn
Evaluation of Metabolism of a Defined Pesticide Mixture through Multiple In Vitro Liver Models. Toxics 10 (10) (2022)
Jeffrey G McDonald, Christer S Ejsing, Dominik Kopczynski, Michal Holčapek, Junken Aoki, Makoto Arita, Masanori Arita, Erin S Baker, Justine Bertrand-Michel, John A Bowden, Britta Brügger, Shane R Ellis, Maria Fedorova, William J Griffiths, Xianlin Han, Jürgen Hartler, Nils Hoffmann, Jeremy P Koelmel, Harald C Köfeler, Todd W Mitchell, Valerie B O'Donnell, Daisuke Saigusa, Dominik Schwudke, Andrej Shevchenko, Candice Z Ulmer, Markus R Wenk, Michael Witting, Denise Wolrab, Yu Xia, Robert Ahrends, Gerhard Liebisch, Kim Ekroos
Introducing the Lipidomics Minimal Reporting Checklist. Nature metabolism 4 (9) (2022)
MaKayla Foster, Markace Rainey, Chandler Watson, James N Dodds, Kaylie I Kirkwood, Facundo M Fernández, Erin S Baker
Uncovering PFAS and Other Xenobiotics in the Dark Metabolome Using Ion Mobility Spectrometry, Mass Defect Analysis, and Machine Learning. Environmental science & technology 56 (12) (2022)
Garett T Sansom, Katie R Kirsch, Gaston A Casillas, Krisa Camargo, Terry L Wade, Anthony H Knap, Erin S Baker, Jennifer A Horney
Spatial Distribution of Polycyclic Aromatic Hydrocarbon Contaminants after Hurricane Harvey in a Houston Neighborhood. Journal of health & pollution 11 (29) (2021)
Kyle D Duncan, Xiaofei Sun, Erin S Baker, Sudhansu K Dey, Ingela Lanekoff
Author Correction: In situ imaging reveals disparity between prostaglandin localization and abundance of prostaglandin synthases. Communications biology 4 (1) (2021)
Melanie T Odenkirk, Brian M Horman, James N Dodds, Heather B Patisaul, Erin S Baker
Combining Micropunch Histology and Multidimensional Lipidomic Measurements for In-Depth Tissue Mapping. ACS measurement science Au 2 (1) (2021)
James N Dodds, Erin S Baker
Improving the Speed and Selectivity of Newborn Screening Using Ion Mobility Spectrometry-Mass Spectrometry. Analytical chemistry (2021)
Kyle D Duncan, Xiaofei Sun, Erin S Baker, Sudhansu K Dey, Ingela Lanekoff
In situ imaging reveals disparity between prostaglandin localization and abundance of prostaglandin synthases. Communications biology 4 (1) (2021)
Melanie T Odenkirk, David M Reif, Erin S Baker
Multiomic Big Data Analysis Challenges: Increasing Confidence in the Interpretation of Artificial Intelligence Assessments. Analytical chemistry 93 (22) (2021)
Marshall R Ligare, Kelsey A Morrison, Michael A Hewitt, J Ulises Reveles, Niranjan Govind, Heriberto Hernandez, Erin S Baker, Brian H Clowers, Julia Laskin, Grant E Johnson
Ion Mobility Spectrometry Characterization of the Intermediate Hydrogen-Containing Gold Cluster Au7(PPh3)7H52. The journal of physical chemistry letters 12 (10) (2021)
Aivett Bilbao, Bryson C Gibbons, Sarah M Stow, Jennifer E Kyle, Kent J Bloodsworth, Samuel H Payne, Richard D Smith, Helen S C Lazzarin, Erin S Baker, John C Fjeldsted
A Preprocessing Tool for Enhanced Ion Mobility-Mass Spectrometry-Based Omics Workflows. Journal of proteome research (2021)
Kaylie I Kirkwood, Michael W Christopher, Jefferey L Burgess, Sally R Littau, Kevin Foster, Karen Richey, Brian S Pratt, Nicholas Shulman, Kaipo Tamura, Michael J MacCoss, Brendan X MacLean, Erin S Baker
Development and Application of Multidimensional Lipid Libraries to Investigate Lipidomic Dysregulation Related to Smoke Inhalation Injury Severity. Journal of proteome research (2021)
James N Dodds, Zachary R Hopkins, Detlef R U Knappe, Erin S Baker
Rapid Characterization of Per- and Polyfluoroalkyl Substances (PFAS) by Ion Mobility Spectrometry-Mass Spectrometry (IMS-MS). Analytical chemistry 92 (6) (2020)
James N Dodds, Nancy Lee M Alexander, Kaylie I Kirkwood, MaKayla R Foster, Zachary R Hopkins, Detlef R U Knappe, Erin S Baker
From Pesticides to Per- and Polyfluoroalkyl Substances: An Evaluation of Recent Targeted and Untargeted Mass Spectrometry Methods for Xenobiotics. Analytical chemistry 93 (1) (2020)
Måns Ekelöf, James N Dodds, Sitora Khodjaniyazova, Kenneth P Garrard, Erin S Baker, David C Muddiman
Coupling IR-MALDESI with Drift Tube Ion Mobility-Mass Spectrometry for High-Throughput Screening and Imaging Applications. Journal of the American Society for Mass Spectrometry 31 (3) (2020)
Melanie T Odenkirk, Kelly G Stratton, Lisa M Bramer, Bobbie-Jo M Webb-Robertson, Kent J Bloodsworth, Matthew E Monroe, Kristin E Burnum-Johnson, Erin S Baker
From Prevention to Disease Perturbations: A Multi-Omic Assessment of Exercise and Myocardial Infarctions. Biomolecules 11 (1) (2020)
Yu-Syuan Luo, Noor A Aly, James P McCord, Mark J Strynar, Weihsueh A Chiu, James N Dodds, Erin S Baker, Ivan Rusyn
Rapid Characterization of Emerging Per- and Polyfluoroalkyl Substances in Aqueous Film-Forming Foams Using Ion Mobility Spectrometry-Mass Spectrometry. Environmental science & technology 54 (23) (2020)
Pier-Luc Plante, Élina Francovic-Fontaine, Jody C May, John A McLean, Erin S Baker, François Laviolette, Mario Marchand, Jacques Corbeil
Predicting Ion Mobility Collision Cross-Sections Using a Deep Neural Network: DeepCCS. Analytical chemistry 91 (8) (2019)
Yukun Zhang, Yulong Zhong, Alan L Connor, Daniel P Miller, Ruikai Cao, Jie Shen, Bo Song, Erin S Baker, Quan Tang, Surya V S R K Pulavarti, Rui Liu, Qiwei Wang, Zhong-Lin Lu, Thomas Szyperski, Huaqiang Zeng, Xiaopeng Li, Richard D Smith, Eva Zurek, Jin Zhu, Bing Gong
Folding and Assembly of Short α, β, γ-Hybrid Peptides: Minor Variations in Sequence and Drastic Differences in Higher-Level Structures. Journal of the American Chemical Society 141 (36) (2019)
James N Dodds, Erin S Baker
Ion Mobility Spectrometry: Fundamental Concepts, Instrumentation, Applications, and the Road Ahead. Journal of the American Society for Mass Spectrometry 30 (11) (2019)
Erin S Baker, Gary J Patti
Perspectives on Data Analysis in Metabolomics: Points of Agreement and Disagreement from the 2018 ASMS Fall Workshop. Journal of the American Society for Mass Spectrometry 30 (10) (2019)
Christopher D Chouinard, Gabe Nagy, Ian K Webb, Sandilya V B Garimella, Erin S Baker, Helen S C Lazzarin, Richard D Smith
Rapid Ion Mobility Separations of Bile Acid Isomers Using Cyclodextrin Adducts and Structures for Lossless Ion Manipulations. Analytical chemistry 90 (18) (2018)
Christopher D Chouinard, Gabe Nagy, Ian K Webb, Tujin Shi, Erin S Baker, Spencer A Prost, Tao Liu, Helen S C Lazzarin, Richard D Smith
Improved Sensitivity and Separations for Phosphopeptides using Online Liquid Chromotography Coupled with Structures for Lossless Ion Manipulations Ion Mobility-Mass Spectrometry. Analytical chemistry 90 (18) (2018)
Brendan X MacLean, Brian S Pratt, Jarrett D Egertson, Michael J MacCoss, Richard D Smith, Erin S Baker
Using Skyline to Analyze Data-Containing Liquid Chromatography, Ion Mobility Spectrometry, and Mass Spectrometry Dimensions. Journal of the American Society for Mass Spectrometry 29 (11) (2018)
Xueyun Zheng, Noor A Aly, Yuxuan Zhou, Kevin T Dupuis, Aivett Bilbao, Vanessa L Paurus, Daniel J Orton, Ryan Wilson, Samuel H Payne, Richard D Smith, Erin S Baker
A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry. Chemical science 8 (11) (2017)
Liulin Deng, Sandilya V B Garimella, Ahmed M Hamid, Ian K Webb, Isaac K Attah, Randolph V Norheim, Spencer A Prost, Xueyun Zheng, Jeremy A Sandoval, Erin S Baker, Helen S C Lazzarin, Richard D Smith
Compression Ratio Ion Mobility Programming (CRIMP) Accumulation and Compression of Billions of Ions for Ion Mobility-Mass Spectrometry Using Traveling Waves in Structures for Lossless Ion Manipulations (SLIM). Analytical chemistry 89 (12) (2017)
Berwyck L J Poad, Xueyun Zheng, Todd W Mitchell, Richard D Smith, Erin S Baker, Stephen J Blanksby
Online Ozonolysis Combined with Ion Mobility-Mass Spectrometry Provides a New Platform for Lipid Isomer Analyses. Analytical chemistry 90 (2) (2017)
Daniel J Orton, Malak M Tfaily, Ronald J Moore, Brian L LaMarche, Xueyun Zheng, Thomas L Fillmore, Rosalie K Chu, Karl K Weitz, Matthew E Monroe, Ryan T Kelly, Richard D Smith, Erin S Baker
A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements. Analytical chemistry 90 (1) (2017)
Xueyun Zheng, Ryan S Renslow, Mpho M Makola, Ian K Webb, Liulin Deng, Dennis G Thomas, Niranjan Govind, Helen S C Lazzarin, Mwadham M Kabanda, Ian A Dubery, Heino M Heyman, Richard D Smith, Ntakadzeni E Madala, Erin S Baker
Structural Elucidation of cis/trans Dicaffeoylquinic Acid Photoisomerization Using Ion Mobility Spectrometry-Mass Spectrometry. The journal of physical chemistry letters 8 (7) (2017)
Liulin Deng, Ian K Webb, Sandilya V B Garimella, Ahmed M Hamid, Xueyun Zheng, Randolph V Norheim, Spencer A Prost, Gordon A Anderson, Jeremy A Sandoval, Erin S Baker, Helen S C Lazzarin, Richard D Smith
Serpentine Ultralong Path with Extended Routing (SUPER) High Resolution Traveling Wave Ion Mobility-MS using Structures for Lossless Ion Manipulations. Analytical chemistry 89 (8) (2017)
Sarah M Stow, Tim J Causon, Xueyun Zheng, Ruwan T Kurulugama, Teresa Mairinger, Jody C May, Emma E Rennie, Erin S Baker, Richard D Smith, John A McLean, Stephan Hann, John C Fjeldsted
An Interlaboratory Evaluation of Drift Tube Ion Mobility-Mass Spectrometry Collision Cross Section Measurements. Analytical chemistry 89 (17) (2017)

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Erin S Baker