David Osumi-Sutherland

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 15

Top Topics

Genome Wide Association

Dna Methylation

Top Venues

bioRxiv : the preprint server for biology

Bioinformatics (Oxford, England)

Systematic biology

RNA (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Yasemin Bridges, Vinícius De Souza, Katherina G Cortes, Melissa A Haendel, Nomi L Harris, Daniel R Korn, Nikolaos M Marinakis, Nicolas A Matentzoglu, James Alastair McLaughlin, Christopher John Mungall, David Osumi-Sutherland, Peter Nick Robinson, Damian Smedley, Julius O B Jacobsen
Towards a standard benchmark for variant and gene prioritisation algorithms: PhEval - Phenotypic inference Evaluation framework. bioRxiv : the preprint server for biology (2024)
Yasemin Bridges, Vinícius De Souza, Katherina G Cortes, Melissa A Haendel, Nomi L Harris, Daniel R Korn, Nikolaos M Marinakis, Nicolas A Matentzoglu, James Alastair McLaughlin, Christopher John Mungall, David Osumi-Sutherland, Peter Nick Robinson, Damian Smedley, Julius O B Jacobsen
Towards a standard benchmark for variant and gene prioritisation algorithms: PhEval - Phenotypic inference Evaluation framework. bioRxiv : the preprint server for biology (2024)
Déborah Caucheteur, Zoë May Pendlington, Paola Roncaglia, Julien Gobeill, Luc Mottin, Nicolas Matentzoglu, Donat Agosti, David Osumi-Sutherland, Helen Parkinson, Patrick Ruch
COVoc and COVTriage: novel resources to support literature triage. Bioinformatics (Oxford, England) 39 (1) (2023)
Jennifer C Girón, Sergei Tarasov, Luis Antonio González Montaña, Nicolas Matentzoglu, Aaron D Smith, Markus Koch, Brendon E Boudinot, Patrice Bouchard, Roger Burks, Lars Vogt, Matthew Yoder, David Osumi-Sutherland, Frank Friedrich, Rolf Georg Beutel, István Mikó
Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics. Systematic biology (2023)
Jennifer C Girón, Sergei Tarasov, Luis Antonio González Montaña, Nicolas Matentzoglu, Aaron D Smith, Markus Koch, Brendon E Boudinot, Patrice Bouchard, Roger Burks, Lars Vogt, Matthew Yoder, David Osumi-Sutherland, Frank Friedrich, Rolf Georg Beutel, István Mikó
Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics. Systematic biology (2023)
Déborah Caucheteur, Zoë May Pendlington, Paola Roncaglia, Julien Gobeill, Luc Mottin, Nicolas Matentzoglu, Donat Agosti, David Osumi-Sutherland, Helen Parkinson, Patrick Ruch
COVoc and COVTriage: novel resources to support literature triage. Bioinformatics (Oxford, England) 39 (1) (2023)
Ray Stefancsik, James P Balhoff, Meghan A Balk, Robyn L Ball, Susan M Bello, Anita R Caron, Elissa J Chesler, Vinícius De Souza, Sarah Gehrke, Melissa A Haendel, Laura W Harris, Nomi L Harris, Arwa Ibrahim, Sebastian Koehler, Nicolas A Matentzoglu, Julie A McMurry, Christopher John Mungall, Monica C Munoz-Torres, Timothy Putman, Peter Nick Robinson, Damian Smedley, Elliot Sollis, Anne E Thessen, Nicole A Vasilevsky, David O Walton, David Osumi-Sutherland
The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences. bioRxiv : the preprint server for biology (2023)
Déborah Caucheteur, Zoë May Pendlington, Paola Roncaglia, Julien Gobeill, Luc Mottin, Nicolas Matentzoglu, Donat Agosti, David Osumi-Sutherland, Helen Parkinson, Patrick Ruch
COVoc and COVTriage: novel resources to support literature triage. Bioinformatics (Oxford, England) 39 (1) (2023)
Jennifer C Girón, Sergei Tarasov, Luis Antonio González Montaña, Nicolas Matentzoglu, Aaron D Smith, Markus Koch, Brendon E Boudinot, Patrice Bouchard, Roger Burks, Lars Vogt, Matthew Yoder, David Osumi-Sutherland, Frank Friedrich, Rolf Georg Beutel, István Mikó
Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics. Systematic biology (2023)
Déborah Caucheteur, Zoë May Pendlington, Paola Roncaglia, Julien Gobeill, Luc Mottin, Nicolas Matentzoglu, Donat Agosti, David Osumi-Sutherland, Helen Parkinson, Patrick Ruch
COVoc and COVTriage: novel resources to support literature triage. Bioinformatics (Oxford, England) 39 (1) (2023)
Ray Stefancsik, James P Balhoff, Meghan A Balk, Robyn L Ball, Susan M Bello, Anita R Caron, Elissa J Chesler, Vinícius De Souza, Sarah Gehrke, Melissa A Haendel, Laura W Harris, Nomi L Harris, Arwa Ibrahim, Sebastian Koehler, Nicolas A Matentzoglu, Julie A McMurry, Christopher John Mungall, Monica C Munoz-Torres, Timothy Putman, Peter Nick Robinson, Damian Smedley, Elliot Sollis, Anne E Thessen, Nicole A Vasilevsky, David O Walton, David Osumi-Sutherland
The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences. bioRxiv : the preprint server for biology (2023)
Rebecca C Jackson, Nicolas A Matentzoglu, James A Overton, Randi Vita, James P Balhoff, Pier Luigi Buttigieg, Seth J Carbon, Mélanie Courtot, Alexander D Diehl, Damion M Dooley, William D Duncan, Nomi L Harris, Melissa A Haendel, Suzanna E Lewis, Darren A Natale, David Osumi-Sutherland, Alan Ruttenberg, Lynn M Schriml, Barry Smith, Christian J Stoeckert, Nicole A Vasilevsky, Ramona L Walls, Jie Zheng, Christopher John Mungall, Bjoern Peters
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies. Database : the journal of biological databases and curation 2021 (2022)
Elliot Sollis, Abayomi Mosaku, Ala Abid, Annalisa Buniello, Maria Cerezo, Laurent Gil, Tudor Groza, Osman Güneş, Peggy Hall, James D Hayhurst, Arwa Ibrahim, Yue Ji, Sajo John, Elizabeth Lewis, Jacqueline A L MacArthur, Aoife C McMahon, David Osumi-Sutherland, Kalliope Panoutsopoulou, Zoë Pendlington, Santhi Ramachandran, Ray Stefancsik, Jonathan Stewart, Patricia L Whetzel, Robert Wilson, Lucia A Hindorff, Fiona Cunningham, Samuel A Lambert, Michael Inouye, Helen Parkinson, Laura W Harris
The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource. Nucleic acids research (2022)
David Osumi-Sutherland, Melanie Courtot, James P Balhoff, Christopher Mungall
Dead simple OWL design patterns. Journal of biomedical semantics 8 (1) (2017)
Rachael P Huntley, Dmitry S Sitnikov, Marija Orlic-Milacic, Rama Balakrishnan, Peter D'Eustachio, Marc E Gillespie, Douglas G Howe, Anastasia Z Kalea, Lars Maegdefessel, David Osumi-Sutherland, Victoria Petri, Jennifer R Smith, Kimberly M Van Auken, Valerie Wood, Anna Zampetaki, Manuel Mayr, Ruth C Lovering
Guidelines for the functional annotation of microRNAs using the Gene Ontology. RNA (New York, N.Y.) 22 (5) (2016)