Melissa A Haendel (Melissa Haendel)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 103

Top Venues

medRxiv : the preprint server for health sciences

Nature genetics

Journal of the American Medical Informatics Association : JAMIA

PloS one

This page only lists publications with an associated author ORCID identifier.

Publications

Justin T Reese, Leonardo Chimirri, Daniel Danis, J Harry Caufield, Kyran Wissink, Elena Casiraghi, Giorgio Valentini, Melissa A Haendel, Christopher John Mungall, Peter Nick Robinson
Evaluation of the Diagnostic Accuracy of GPT-4 in Five Thousand Rare Disease Cases. medRxiv : the preprint server for health sciences (2024)
Gareth S Baynam, Daria Julkowska, Sarah Bowdin, Azure Hermes, Christopher R McMaster, Elissa Prichep, Étienne Richer, Francois Hendrikus van der Westhuizen, Gabriela M Repetto, Helen Louise Malherbe, Juergen K V Reichardt, Laura Arbour, Maui Hudson, Kelly du Plessis, Melissa A Haendel, Phillip Wilcox, Sally Ann Lynch, Shamir Rind, Simon Easteal, Xavier Estivil, Nadine Caron, Meck Chongo, Yarlalu Thomas, Mary Catherine V Letinturier, Barend Christiaan Vorster
Advancing diagnosis and research for rare genetic diseases in Indigenous peoples. Nature genetics 56 (2) (2024)
Eric Hurwitz, Zachary Butzin-Dozier, Hiral Master, Shawn T O'Neil, Anita Walden, Michelle Holko, Rena C Patel, Melissa A Haendel
Harnessing Consumer Wearable Digital Biomarkers for Individualized Recognition of Postpartum Depression Using the All of Us Research Program Data Set: Cross-Sectional Study. JMIR mHealth and uHealth 12 (2024)
Justin T Reese, Leonardo Chimirri, Daniel Danis, J Harry Caufield, Kyran Wissink, Elena Casiraghi, Giorgio Valentini, Melissa A Haendel, Christopher John Mungall, Peter Nick Robinson
Evaluation of the Diagnostic Accuracy of GPT-4 in Five Thousand Rare Disease Cases. medRxiv : the preprint server for health sciences (2024)
Alexander J Preiss, Abhishek Bhatia, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Thomas W Carton, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff, null null, null null
Effect of Paxlovid Treatment During Acute COVID-19 on Long COVID Onset: An EHR-Based Target Trial Emulation from the N3C and RECOVER Consortia. medRxiv : the preprint server for health sciences (2024)
Gareth S Baynam, Daria Julkowska, Sarah Bowdin, Azure Hermes, Christopher R McMaster, Elissa Prichep, Étienne Richer, Francois Hendrikus van der Westhuizen, Gabriela M Repetto, Helen Louise Malherbe, Juergen K V Reichardt, Laura Arbour, Maui Hudson, Kelly du Plessis, Melissa A Haendel, Phillip Wilcox, Sally Ann Lynch, Shamir Rind, Simon Easteal, Xavier Estivil, Nadine Caron, Meck Chongo, Yarlalu Thomas, Mary Catherine V Letinturier, Barend Christiaan Vorster
Advancing diagnosis and research for rare genetic diseases in Indigenous peoples. Nature genetics 56 (2) (2024)
J Harry Caufield, Harshad Hegde, Vincent Emonet, Nomi L Harris, Marcin P Joachimiak, Nicolas A Matentzoglu, HyeongSik Kim, Sierra A T Moxon, Justin T Reese, Melissa A Haendel, Peter Nick Robinson, Christopher John Mungall
Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning. Bioinformatics (Oxford, England) 40 (3) (2024)
Eric Hurwitz, Zachary Butzin-Dozier, Hiral Master, Shawn T O'Neil, Anita Walden, Michelle Holko, Rena C Patel, Melissa A Haendel
Harnessing Consumer Wearable Digital Biomarkers for Individualized Recognition of Postpartum Depression Using the All of Us Research Program Data Set: Cross-Sectional Study. JMIR mHealth and uHealth 12 (2024)
Shawn T O'Neil, Charisse R Madlock-Brown, Kenneth J Wilkins, Brenda M McGrath, Hannah E Davis, Gina S Assaf, Hannah Wei, Parya Zareie, Evan T French, Johanna Jean Loomba, Julie A McMurry, Andrea Zhou, Christopher G Chute, Richard A Moffitt, Emily Rose Pfaff, Yun Jae Yoo, Peter J Leese, Robert F Chew, Michael Lieberman, Melissa A Haendel
Finding Long-COVID: Temporal Topic Modeling of Electronic Health Records from the N3C and RECOVER Programs. medRxiv : the preprint server for health sciences (2024)
Alexander J Preiss, Abhishek Bhatia, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Thomas W Carton, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff
EFFECT OF PAXLOVID TREATMENT DURING ACUTE COVID-19 ON LONG COVID ONSET: AN EHR-BASED TARGET TRIAL EMULATION FROM THE N3C AND RECOVER CONSORTIA. medRxiv : the preprint server for health sciences (2024)
Shawn T O'Neil, Charisse R Madlock-Brown, Kenneth J Wilkins, Brenda M McGrath, Hannah E Davis, Gina S Assaf, Hannah Wei, Parya Zareie, Evan T French, Johanna Jean Loomba, Julie A McMurry, Andrea Zhou, Christopher G Chute, Richard A Moffitt, Emily Rose Pfaff, Yun Jae Yoo, Peter J Leese, Robert F Chew, Michael Lieberman, Melissa A Haendel
Finding Long-COVID: Temporal Topic Modeling of Electronic Health Records from the N3C and RECOVER Programs. medRxiv : the preprint server for health sciences (2024)
Klara R Klein, Trine J Abrahamsen, Angelica Cristello Sarteau, G Caleb Alexander, Christopher G Chute, Melissa A Haendel, Stephanie S Hong, Hemalkumar B Mehta, Richard A Moffitt, Til Stürmer, Kajsa Kvist, John B Buse, null null
Association of Premorbid GLP-1RA and SGLT-2i Prescription Alone and in Combination with COVID-19 Severity. Diabetes therapy : research, treatment and education of diabetes and related disorders 15 (5) (2024)
Alexander J Preiss, Abhishek Bhatia, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Thomas W Carton, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff, null null
Effect of Paxlovid Treatment During Acute COVID-19 on Long COVID Onset: An EHR-Based Target Trial Emulation from the N3C and RECOVER Consortia. medRxiv : the preprint server for health sciences (2024)
Gareth S Baynam, Daria Julkowska, Sarah Bowdin, Azure Hermes, Christopher R McMaster, Elissa Prichep, Étienne Richer, Francois Hendrikus van der Westhuizen, Gabriela M Repetto, Helen Louise Malherbe, Juergen K V Reichardt, Laura Arbour, Maui Hudson, Kelly du Plessis, Melissa A Haendel, Phillip Wilcox, Sally Ann Lynch, Shamir Rind, Simon Easteal, Xavier Estivil, Nadine Caron, Meck Chongo, Yarlalu Thomas, Mary Catherine V Letinturier, Barend Christiaan Vorster
Advancing diagnosis and research for rare genetic diseases in Indigenous peoples. Nature genetics 56 (2) (2024)
Eric Hurwitz, Zachary Butzin-Dozier, Hiral Master, Shawn T O'Neil, Anita Walden, Michelle Holko, Rena C Patel, Melissa A Haendel
Harnessing Consumer Wearable Digital Biomarkers for Individualized Recognition of Postpartum Depression Using the All of Us Research Program Data Set: Cross-Sectional Study. JMIR mHealth and uHealth 12 (2024)
Yasemin Bridges, Vinícius De Souza, Katherina G Cortes, Melissa A Haendel, Nomi L Harris, Daniel R Korn, Nikolaos M Marinakis, Nicolas A Matentzoglu, James Alastair McLaughlin, Christopher John Mungall, David Osumi-Sutherland, Peter Nick Robinson, Damian Smedley, Julius O B Jacobsen
Towards a standard benchmark for variant and gene prioritisation algorithms: PhEval - Phenotypic inference Evaluation framework. bioRxiv : the preprint server for biology (2024)
Gareth S Baynam, Daria Julkowska, Sarah Bowdin, Azure Hermes, Christopher R McMaster, Elissa Prichep, Étienne Richer, Francois Hendrikus van der Westhuizen, Gabriela M Repetto, Helen Louise Malherbe, Juergen K V Reichardt, Laura Arbour, Maui Hudson, Kelly du Plessis, Melissa A Haendel, Phillip Wilcox, Sally Ann Lynch, Shamir Rind, Simon Easteal, Xavier Estivil, Nadine Caron, Meck Chongo, Yarlalu Thomas, Mary Catherine V Letinturier, Barend Christiaan Vorster
Advancing diagnosis and research for rare genetic diseases in Indigenous peoples. Nature genetics 56 (2) (2024)
Yasemin Bridges, Vinícius De Souza, Katherina G Cortes, Melissa A Haendel, Nomi L Harris, Daniel R Korn, Nikolaos M Marinakis, Nicolas A Matentzoglu, James Alastair McLaughlin, Christopher John Mungall, David Osumi-Sutherland, Peter Nick Robinson, Damian Smedley, Julius O B Jacobsen
Towards a standard benchmark for variant and gene prioritisation algorithms: PhEval - Phenotypic inference Evaluation framework. bioRxiv : the preprint server for biology (2024)
Alexander J Preiss, Abhishek Bhatia, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Thomas W Carton, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff, null null
Effect of Paxlovid Treatment During Acute COVID-19 on Long COVID Onset: An EHR-Based Target Trial Emulation from the N3C and RECOVER Consortia. medRxiv : the preprint server for health sciences (2024)
Klara R Klein, Trine J Abrahamsen, Angelica Cristello Sarteau, G Caleb Alexander, Christopher G Chute, Melissa A Haendel, Stephanie S Hong, Hemalkumar B Mehta, Richard A Moffitt, Til Stürmer, Kajsa Kvist, John B Buse, null null
Association of Premorbid GLP-1RA and SGLT-2i Prescription Alone and in Combination with COVID-19 Severity. Diabetes therapy : research, treatment and education of diabetes and related disorders 15 (5) (2024)
Alexander J Preiss, Abhishek Bhatia, Chengxi Zang, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Mark G Weiner, Thomas W Carton, Fei Wang, Rainu Kaushal, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff
EFFECT OF PAXLOVID TREATMENT ON LONG COVID ONSET: AN EHR-BASED TARGET TRIAL EMULATION FROM N3C. medRxiv : the preprint server for health sciences (2024)
Klara R Klein, Trine J Abrahamsen, Angelica Cristello Sarteau, G Caleb Alexander, Christopher G Chute, Melissa A Haendel, Stephanie S Hong, Hemalkumar B Mehta, Richard A Moffitt, Til Stürmer, Kajsa Kvist, John B Buse, null null
Association of Premorbid GLP-1RA and SGLT-2i Prescription Alone and in Combination with COVID-19 Severity. Diabetes therapy : research, treatment and education of diabetes and related disorders (2024)
Gareth S Baynam, Daria Julkowska, Sarah Bowdin, Azure Hermes, Christopher R McMaster, Elissa Prichep, Étienne Richer, Francois Hendrikus van der Westhuizen, Gabriela M Repetto, Helen Louise Malherbe, Juergen K V Reichardt, Laura Arbour, Maui Hudson, Kelly du Plessis, Melissa A Haendel, Phillip Wilcox, Sally Ann Lynch, Shamir Rind, Simon Easteal, Xavier Estivil, Nadine Caron, Meck Chongo, Yarlalu Thomas, Mary Catherine V Letinturier, Barend Christiaan Vorster
Advancing diagnosis and research for rare genetic diseases in Indigenous peoples. Nature genetics 56 (2) (2024)
Eric Hurwitz, Zachary Butzin-Dozier, Hiral Master, Shawn T O'Neil, Anita Walden, Michelle Holko, Rena C Patel, Melissa A Haendel
Harnessing Consumer Wearable Digital Biomarkers for Individualized Recognition of Postpartum Depression Using the All of Us Research Program Data Set: Cross-Sectional Study. JMIR mHealth and uHealth 12 (2024)
Eric Hurwitz, Zachary Butzin-Dozier, Hiral Master, Shawn T O'Neil, Anita Walden, Michelle Holko, Rena C Patel, Melissa A Haendel
Harnessing Consumer Wearable Digital Biomarkers for Individualized Recognition of Postpartum Depression Using the All of Us Research Program Data Set: Cross-Sectional Study. JMIR mHealth and uHealth 12 (2024)
Xiaoqian Jiang, Liwei Wang, Huan He, Sunyang Fu, Sijia Liu, David A Hanauer, Daniel R Harris, Ramakanth Kavuluru, Rui Zhang, Karthik Natarajan, Nishanth P Pavinkurve, Janos G Hajagos, Sritha Rajupet, Veena Lingam, Mary Saltz, Corey Elowsky, Richard A Moffitt, Farrukh M Koraishy, Matvey B Palchuk, Jordan Donovan, Lora Lingrey, Garo Stone-DerHagopian, Robert T Miller, Andrew E Williams, Peter J Leese, Paul I Kovach, Emily Rose Pfaff, Mikhail Zemmel, Robert D Pates, Nick Guthe, Melissa A Haendel, Christopher G Chute, Hongfang Liu, null null, null null
A Case Demonstration of the Open Health Natural Language Processing Toolkit From the National COVID-19 Cohort Collaborative and the Researching COVID to Enhance Recovery Programs for a Natural Language Processing System for COVID-19 or Postacute Sequelae of SARS CoV-2 Infection: Algorithm Development and Validation. JMIR medical informatics 12 (2024)
Alexander J Preiss, Abhishek Bhatia, Chengxi Zang, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Mark G Weiner, Thomas W Carton, Fei Wang, Rainu Kaushal, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff
Effect of Paxlovid Treatment on Long COVID Onset: An EHR-Based Target Trial Emulation from N3C. medRxiv : the preprint server for health sciences (2024)
Emily C Hadley, Yun Jae Yoo, Saaya Patel, Andrea Zhou, Bryan Laraway, Rachel Wong, Alexander J Preiss, Robert F Chew, Hannah E Davis, M Daniel Brannock, Christopher G Chute, Emily Rose Pfaff, Johanna Loomba, Melissa A Haendel, Elaine L Hill, null null, Richard A Moffitt
Insights from an N3C RECOVER EHR-based cohort study characterizing SARS-CoV-2 reinfections and Long COVID. Communications medicine 4 (1) (2024)
Emily C Hadley, Yun Jae Yoo, Saaya Patel, Andrea Zhou, Bryan Laraway, Rachel Wong, Alexander J Preiss, Robert F Chew, Hannah E Davis, M Daniel Brannock, Christopher G Chute, Emily Rose Pfaff, Johanna Loomba, Melissa A Haendel, Elaine L Hill, null null, Richard A Moffitt
Insights from an N3C RECOVER EHR-based cohort study characterizing SARS-CoV-2 reinfections and Long COVID. Communications medicine 4 (1) (2024)
J Harry Caufield, Harshad Hegde, Vincent Emonet, Nomi L Harris, Marcin P Joachimiak, Nicolas A Matentzoglu, HyeongSik Kim, Sierra A T Moxon, Justin T Reese, Melissa A Haendel, Peter Nick Robinson, Christopher John Mungall
Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning. Bioinformatics (Oxford, England) 40 (3) (2024)
Daniel Danis, Michael J Bamshad, Yasemin Bridges, Pilar Cacheiro, Leigh C Carmody, Jessica Xiao-Ling Chong, Ben Coleman, Raymond Dalgleish, Peter J Freeman, Adam S L Graefe, Tudor Groza, Julius O B Jacobsen, Adam Klocperk, Maaike A A Kusters, Markus S Ladewig, Anthony J Marcello, Teresa Mattina, Christopher John Mungall, Monica C Munoz-Torres, Justin T Reese, Filip Rehburg, Bárbara C S Reis, Catharina Schuetz, Damian Smedley, Timmy Strauß, Jagadish Chandrabose Sundaramurthi, Sylvia Thun, Kyran Wissink, John F Wagstaff, David Zocche, Melissa A Haendel, Peter Nick Robinson
A corpus of GA4GH Phenopackets: case-level phenotyping for genomic diagnostics and discovery. medRxiv : the preprint server for health sciences (2024)
Gareth S Baynam, Daria Julkowska, Sarah Bowdin, Azure Hermes, Christopher R McMaster, Elissa Prichep, Étienne Richer, Francois Hendrikus van der Westhuizen, Gabriela M Repetto, Helen Louise Malherbe, Juergen K V Reichardt, Laura Arbour, Maui Hudson, Kelly du Plessis, Melissa A Haendel, Phillip Wilcox, Sally Ann Lynch, Shamir Rind, Simon Easteal, Xavier Estivil, Nadine Caron, Meck Chongo, Yarlalu Thomas, Mary Catherine V Letinturier, Barend Christiaan Vorster
Advancing diagnosis and research for rare genetic diseases in Indigenous peoples. Nature genetics (2024)
Alexander J Preiss, Abhishek Bhatia, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Thomas W Carton, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff
EFFECT OF PAXLOVID TREATMENT DURING ACUTE COVID-19 ON LONG COVID ONSET: AN EHR-BASED TARGET TRIAL EMULATION FROM THE N3C AND RECOVER CONSORTIA. medRxiv : the preprint server for health sciences (2024)
Daniel Danis, Michael J Bamshad, Yasemin Bridges, Pilar Cacheiro, Leigh C Carmody, Jessica Xiao-Ling Chong, Ben Coleman, Raymond Dalgleish, Peter J Freeman, Adam S L Graefe, Tudor Groza, Julius O B Jacobsen, Adam Klocperk, Maaike A A Kusters, Markus S Ladewig, Anthony J Marcello, Teresa Mattina, Christopher John Mungall, Monica C Munoz-Torres, Justin T Reese, Filip Rehburg, Bárbara C S Reis, Catharina Schuetz, Damian Smedley, Timmy Strauß, Jagadish Chandrabose Sundaramurthi, Sylvia Thun, Kyran Wissink, John F Wagstaff, David Zocche, Melissa A Haendel, Peter Nick Robinson
A corpus of GA4GH Phenopackets: case-level phenotyping for genomic diagnostics and discovery. medRxiv : the preprint server for health sciences (2024)
J Harry Caufield, Harshad Hegde, Vincent Emonet, Nomi L Harris, Marcin P Joachimiak, Nicolas A Matentzoglu, HyeongSik Kim, Sierra A T Moxon, Justin T Reese, Melissa A Haendel, Peter Nick Robinson, Christopher John Mungall
Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning. Bioinformatics (Oxford, England) 40 (3) (2024)
Enock Niyonkuru, J Harry Caufield, Leigh C Carmody, Michael Gargano, Sabrina Toro, Patricia L Whetzel, Hannah Blau, Mauricio Soto Gomez, Elena Casiraghi, Leonardo Chimirri, Justin T Reese, Giorgio Valentini, Melissa A Haendel, Christopher John Mungall, Peter Nick Robinson
Leveraging Generative AI to Accelerate Biocuration of Medical Actions for Rare Disease. medRxiv : the preprint server for health sciences (2024)
Alexander J Preiss, Abhishek Bhatia, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Thomas W Carton, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff, null null
Effect of Paxlovid Treatment During Acute COVID-19 on Long COVID Onset: An EHR-Based Target Trial Emulation from the N3C and RECOVER Consortia. medRxiv : the preprint server for health sciences (2024)
Klara R Klein, Trine J Abrahamsen, Angelica Cristello Sarteau, G Caleb Alexander, Christopher G Chute, Melissa A Haendel, Stephanie S Hong, Hemalkumar B Mehta, Richard A Moffitt, Til Stürmer, Kajsa Kvist, John B Buse, null null
Association of Premorbid GLP-1RA and SGLT-2i Prescription Alone and in Combination with COVID-19 Severity. Diabetes therapy : research, treatment and education of diabetes and related disorders 15 (5) (2024)
Justin T Reese, Leonardo Chimirri, Daniel Danis, J Harry Caufield, Kyran Wissink, Elena Casiraghi, Giorgio Valentini, Melissa A Haendel, Christopher John Mungall, Peter Nick Robinson
Evaluation of the Diagnostic Accuracy of GPT-4 in Five Thousand Rare Disease Cases. medRxiv : the preprint server for health sciences (2024)
Alexander J Preiss, Abhishek Bhatia, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Thomas W Carton, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff
EFFECT OF PAXLOVID TREATMENT DURING ACUTE COVID-19 ON LONG COVID ONSET: AN EHR-BASED TARGET TRIAL EMULATION FROM THE N3C AND RECOVER CONSORTIA. medRxiv : the preprint server for health sciences (2024)
Alexander J Preiss, Abhishek Bhatia, Chengxi Zang, Leyna V Aragon, John M Baratta, Monika Baskaran, Frank Blancero, M Daniel Brannock, Robert F Chew, Ivan Diaz, Megan L Fitzgerald, Elizabeth P Kelly, Andrea G Zhou, Mark G Weiner, Thomas W Carton, Fei Wang, Rainu Kaushal, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff
EFFECT OF PAXLOVID TREATMENT ON LONG COVID ONSET: AN EHR-BASED TARGET TRIAL EMULATION FROM N3C. medRxiv : the preprint server for health sciences (2024)
Christine M Suver, Jeremy R Harper, Johanna Jean Loomba, Mary Saltz, Julian Solway, Alfred Jerrod Anzalone, Kellie Walters, Emily Rose Pfaff, Anita Walden, Julie A McMurry, Christopher G Chute, Melissa A Haendel
The N3C governance ecosystem: A model socio-technical partnership for the future of collaborative analytics at scale. Journal of clinical and translational science 7 (1) (2023)
Abhishek Bhatia, Alexander J Preiss, Xuya Xiao, M Daniel Brannock, G Caleb Alexander, Robert F Chew, Megan Fitzgerald, Elaine L Hill, Elizabeth P Kelly, Hemalkumar B Mehta, Charisse R Madlock-Brown, Kenneth J Wilkins, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff, null null
Effect of Nirmatrelvir/Ritonavir (Paxlovid) on Hospitalization among Adults with COVID-19: an EHR-based Target Trial Emulation from N3C. medRxiv : the preprint server for health sciences (2023)
Christine M Suver, Jeremy R Harper, Johanna Jean Loomba, Mary Saltz, Julian Solway, Alfred Jerrod Anzalone, Kellie Walters, Emily Rose Pfaff, Anita Walden, Julie A McMurry, Christopher G Chute, Melissa A Haendel
The N3C governance ecosystem: A model socio-technical partnership for the future of collaborative analytics at scale. Journal of clinical and translational science 7 (1) (2023)
Wei-Qi Wei, Christopher Guardo, Srushti Gandireddy, Chao Yan, Henry Ong, Vern Kerchberger, Alyson L Dickson, Emily Rose Pfaff, Hiral Master, Melissa Basford, Nguyen Tran, Salvatore Mancuso, Toufeeq Syed, Zhong-Ming Zhao, QiPing Feng, Melissa A Haendel, Christopher Lunt, Geoffrey S Ginsburg, Christopher G Chute, Joshua Denny, Dan Roden
Genetic and Survey Data Improves Performance of Machine Learning Model for Long COVID. Research square (2023)
Christine M Suver, Jeremy R Harper, Johanna Jean Loomba, Mary Saltz, Julian Solway, Alfred Jerrod Anzalone, Kellie Walters, Emily Rose Pfaff, Anita Walden, Julie A McMurry, Christopher G Chute, Melissa A Haendel
The N3C governance ecosystem: A model socio-technical partnership for the future of collaborative analytics at scale. Journal of clinical and translational science 7 (1) (2023)
Peter J Leese, Adit Anand, Andrew T Girvin, Amin Manna, Saaya Patel, Yun Jae Yoo, Rachel Wong, Melissa A Haendel, Christopher G Chute, Tellen D Bennett, Janos G Hajagos, Emily Rose Pfaff, Richard A Moffitt
Clinical encounter heterogeneity and methods for resolving in networked EHR data: a study from N3C and RECOVER programs. Journal of the American Medical Informatics Association : JAMIA (2023)
Emily C Hadley, Yun Jae Yoo, Saaya Patel, Andrea G Zhou, Bryan Laraway, Rachel Wong, Alexander J Preiss, Robert F Chew, Hannah Davis, Christopher G Chute, Emily Rose Pfaff, Johanna Jean Loomba, Melissa A Haendel, Elaine L Hill, Richard A Moffitt, null null
SARS-CoV-2 Reinfection is Preceded by Unique Biomarkers and Related to Initial Infection Timing and Severity: an N3C RECOVER EHR-Based Cohort Study. medRxiv : the preprint server for health sciences (2023)
Emily C Hadley, Yun Jae Yoo, Saaya Patel, Andrea G Zhou, Bryan Laraway, Rachel Wong, Alexander J Preiss, Robert F Chew, Hannah Davis, Christopher G Chute, Emily Rose Pfaff, Johanna Jean Loomba, Melissa A Haendel, Elaine L Hill, Richard A Moffitt, null null
SARS-CoV-2 Reinfection is Preceded by Unique Biomarkers and Related to Initial Infection Timing and Severity: an N3C RECOVER EHR-Based Cohort Study. medRxiv : the preprint server for health sciences (2023)
Christine M Suver, Jeremy R Harper, Johanna Jean Loomba, Mary Saltz, Julian Solway, Alfred Jerrod Anzalone, Kellie Walters, Emily Rose Pfaff, Anita Walden, Julie A McMurry, Christopher G Chute, Melissa A Haendel
The N3C governance ecosystem: A model socio-technical partnership for the future of collaborative analytics at scale. Journal of clinical and translational science 7 (1) (2023)
Wei-Qi Wei, Christopher Guardo, Srushti Gandireddy, Chao Yan, Henry Ong, Vern Kerchberger, Alyson L Dickson, Emily Rose Pfaff, Hiral Master, Melissa Basford, Nguyen Tran, Salvatore Mancuso, Toufeeq Syed, Zhong-Ming Zhao, QiPing Feng, Melissa A Haendel, Christopher Lunt, Geoffrey S Ginsburg, Christopher G Chute, Joshua Denny, Dan Roden
Genetic and Survey Data Improves Performance of Machine Learning Model for Long COVID. Research square (2023)
Alfred Jerrod Anzalone, Jing Sun, Vinson A J, William Howard Beasley, William B Hillegass, Kimberly Murray, Brian M Hendricks, Melissa A Haendel, Carol Reynolds Geary, Kristina L Bailey, Corrine K Hanson, Lucio Miele, Ronald Horswell, Julie A McMurry, J Zachary Porterfield, Michael T Vest, H Timothy Bunnell, Jeremy R Harper, Bradley S Price, Susan L Santangelo, Clifford J Rosen, James C McClay, Sally L Hodder, null null
Community risks for SARS-CoV-2 infection among fully vaccinated US adults by rurality: A retrospective cohort study from the National COVID Cohort Collaborative. PloS one 18 (1) (2023)
Alfred Jerrod Anzalone, Jing Sun, Vinson A J, William Howard Beasley, William B Hillegass, Kimberly Murray, Brian M Hendricks, Melissa A Haendel, Carol Reynolds Geary, Kristina L Bailey, Corrine K Hanson, Lucio Miele, Ronald Horswell, Julie A McMurry, J Zachary Porterfield, Michael T Vest, H Timothy Bunnell, Jeremy R Harper, Bradley S Price, Susan L Santangelo, Clifford J Rosen, James C McClay, Sally L Hodder, null null
Community risks for SARS-CoV-2 infection among fully vaccinated US adults by rurality: A retrospective cohort study from the National COVID Cohort Collaborative. PloS one 18 (1) (2023)
Wei-Qi Wei, Christopher Guardo, Srushti Gandireddy, Chao Yan, Henry Ong, Vern Kerchberger, Alyson L Dickson, Emily Rose Pfaff, Hiral Master, Melissa Basford, Nguyen Tran, Salvatore Mancuso, Toufeeq Syed, Zhong-Ming Zhao, QiPing Feng, Melissa A Haendel, Christopher Lunt, Geoffrey S Ginsburg, Christopher G Chute, Joshua Denny, Dan Roden
Genetic and Survey Data Improves Performance of Machine Learning Model for Long COVID. Research square (2023)
Timothy Putman, Kevin Schaper, Nicolas A Matentzoglu, Vincent P Rubinetti, Faisal S Alquaddoomi, Corey Cox, J Harry Caufield, Glass Elsarboukh, Sarah Gehrke, Harshad Hegde, Justin T Reese, Ian Braun, Richard M Bruskiewich, Luca Cappelletti, Seth J Carbon, Anita R Caron, Lauren E Chan, Christopher G Chute, Katherina G Cortes, Vinícius De Souza, Tommaso Fontana, Nomi L Harris, Emily L Hartley, Eric Hurwitz, Julius O B Jacobsen, Madan Krishnamurthy, Bryan J Laraway, James Alastair McLaughlin, Julie A McMurry, Sierra A T Moxon, Kathleen R Mullen, Shawn T O'Neil, Kent A Shefchek, Ray Stefancsik, Sabrina Toro, Nicole A Vasilevsky, Ramona L Walls, Patricia L Whetzel, David Osumi-Sutherland, Damian Smedley, Peter Nick Robinson, Christopher John Mungall, Melissa A Haendel, Monica C Munoz-Torres
The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species. Nucleic acids research (2023)
M Daniel Brannock, Robert F Chew, Alexander J Preiss, Emily C Hadley, Signe Redfield, Julie A McMurry, Peter J Leese, Andrew T Girvin, Miles Crosskey, Andrea G Zhou, Richard A Moffitt, Michele Jonsson Funk, Emily Rose Pfaff, Melissa A Haendel, Christopher G Chute, null null, null null
Long COVID risk and pre-COVID vaccination in an EHR-based cohort study from the RECOVER program. Nature communications 14 (1) (2023)
Peter J Leese, Adit Anand, Andrew T Girvin, Amin Manna, Saaya Patel, Yun Jae Yoo, Rachel Wong, Melissa A Haendel, Christopher G Chute, Tellen D Bennett, Janos G Hajagos, Emily Rose Pfaff, Richard A Moffitt
Clinical encounter heterogeneity and methods for resolving in networked EHR data: a study from N3C and RECOVER programs. Journal of the American Medical Informatics Association : JAMIA (2023)
Christine M Suver, Jeremy R Harper, Johanna Jean Loomba, Mary Saltz, Julian Solway, Alfred Jerrod Anzalone, Kellie Walters, Emily Rose Pfaff, Anita Walden, Julie A McMurry, Christopher G Chute, Melissa A Haendel
The N3C governance ecosystem: A model socio-technical partnership for the future of collaborative analytics at scale. Journal of clinical and translational science 7 (1) (2023)
Emily Rose Pfaff, Andrew T Girvin, Miles Crosskey, Srushti Gangireddy, Hiral Master, Wei-Qi Wei, Vern Eric Kerchberger, Mark G Weiner, Paul A Harris, Melissa Basford, Chris Lunt, Christopher G Chute, Richard A Moffitt, Melissa A Haendel, null null
De-black-boxing health AI: demonstrating reproducible machine learning computable phenotypes using the N3C-RECOVER Long COVID model in the All of Us data repository. Journal of the American Medical Informatics Association : JAMIA (2023)
Alfred Jerrod Anzalone, Jing Sun, Vinson A J, William Howard Beasley, William B Hillegass, Kimberly Murray, Brian M Hendricks, Melissa A Haendel, Carol Reynolds Geary, Kristina L Bailey, Corrine K Hanson, Lucio Miele, Ronald Horswell, Julie A McMurry, J Zachary Porterfield, Michael T Vest, H Timothy Bunnell, Jeremy R Harper, Bradley S Price, Susan L Santangelo, Clifford J Rosen, James C McClay, Sally L Hodder, null null
Community risks for SARS-CoV-2 infection among fully vaccinated US adults by rurality: A retrospective cohort study from the National COVID Cohort Collaborative. PloS one 18 (1) (2023)
Alfred Jerrod Anzalone, Jing Sun, Vinson A J, William Howard Beasley, William B Hillegass, Kimberly Murray, Brian M Hendricks, Melissa A Haendel, Carol Reynolds Geary, Kristina L Bailey, Corrine K Hanson, Lucio Miele, Ronald Horswell, Julie A McMurry, J Zachary Porterfield, Michael T Vest, H Timothy Bunnell, Jeremy R Harper, Bradley S Price, Susan L Santangelo, Clifford J Rosen, James C McClay, Sally L Hodder, null null
Community risks for SARS-CoV-2 infection among fully vaccinated US adults by rurality: A retrospective cohort study from the National COVID Cohort Collaborative. PloS one 18 (1) (2023)
Lauren E Chan, Elena Casiraghi, Timothy Putman, Justin T Reese, Quaker E Harmon, Kevin Schaper, Harshad Hedge, Giorgio Valentini, Charles P Schmitt, Allison A Motsinger-Reif, Janet E Hall, Christopher John Mungall, Peter Nick Robinson, Melissa A Haendel
Predicting nutrition and environmental factors associated with female reproductive disorders using a knowledge graph and random forests. medRxiv : the preprint server for health sciences (2023)
Eric Hurwitz, Zachary Butzin-Dozier, Hiral Master, Shawn T O'Neil, Anita Walden, Michelle Holko, Rena C Patel, Melissa A Haendel
Harnessing consumer wearable digital biomarkers for individualized recognition of postpartum depression using the All of Us Research Program dataset. medRxiv : the preprint server for health sciences (2023)
Ray Stefancsik, James P Balhoff, Meghan A Balk, Robyn L Ball, Susan M Bello, Anita R Caron, Elissa J Chesler, Vinícius De Souza, Sarah Gehrke, Melissa A Haendel, Laura W Harris, Nomi L Harris, Arwa Ibrahim, Sebastian Koehler, Nicolas A Matentzoglu, Julie A McMurry, Christopher John Mungall, Monica C Munoz-Torres, Timothy Putman, Peter Nick Robinson, Damian Smedley, Elliot Sollis, Anne E Thessen, Nicole A Vasilevsky, David O Walton, David Osumi-Sutherland
The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences. bioRxiv : the preprint server for biology (2023)
Emily C Hadley, Yun Jae Yoo, Saaya Patel, Andrea G Zhou, Bryan Laraway, Rachel Wong, Alexander J Preiss, Robert F Chew, Hannah Davis, Christopher G Chute, Emily Rose Pfaff, Johanna Jean Loomba, Melissa A Haendel, Elaine L Hill, Richard A Moffitt, null null
SARS-CoV-2 Reinfection is Preceded by Unique Biomarkers and Related to Initial Infection Timing and Severity: an N3C RECOVER EHR-Based Cohort Study. medRxiv : the preprint server for health sciences (2023)
Wei-Qi Wei, Christopher Guardo, Srushti Gandireddy, Chao Yan, Henry Ong, Vern Kerchberger, Alyson L Dickson, Emily Rose Pfaff, Hiral Master, Melissa Basford, Nguyen Tran, Salvatore Mancuso, Toufeeq Syed, Zhong-Ming Zhao, QiPing Feng, Melissa A Haendel, Christopher Lunt, Geoffrey S Ginsburg, Christopher G Chute, Joshua Denny, Dan Roden
Genetic and Survey Data Improves Performance of Machine Learning Model for Long COVID. Research square (2023)
Peter J Leese, Adit Anand, Andrew T Girvin, Amin Manna, Saaya Patel, Yun Jae Yoo, Rachel Wong, Melissa A Haendel, Christopher G Chute, Tellen D Bennett, Janos G Hajagos, Emily Rose Pfaff, Richard A Moffitt
Clinical encounter heterogeneity and methods for resolving in networked EHR data: a study from N3C and RECOVER programs. Journal of the American Medical Informatics Association : JAMIA (2023)
Alfred Jerrod Anzalone, Jing Sun, Vinson A J, William Howard Beasley, William B Hillegass, Kimberly Murray, Brian M Hendricks, Melissa A Haendel, Carol Reynolds Geary, Kristina L Bailey, Corrine K Hanson, Lucio Miele, Ronald Horswell, Julie A McMurry, J Zachary Porterfield, Michael T Vest, H Timothy Bunnell, Jeremy R Harper, Bradley S Price, Susan L Santangelo, Clifford J Rosen, James C McClay, Sally L Hodder, null null
Community risks for SARS-CoV-2 infection among fully vaccinated US adults by rurality: A retrospective cohort study from the National COVID Cohort Collaborative. PloS one 18 (1) (2023)
Leigh C Carmody, Michael A Gargano, Sabrina Toro, Nicole A Vasilevsky, Margaret P Adam, Hannah Blau, Lauren E Chan, David Gomez Andres, Rita Horvath, Megan L Kraus, Markus S Ladewig, David Lewis-Smith, Hanns Lochmüller, Nicolas A Matentzoglu, Monica C Munoz-Torres, Catharina Schuetz, Berthold Seitz, Morgan N Similuk, Teresa N Sparks, Timmy Strauß, Emilia M Swietlik, Rachel Thompson, Xingmin Aaron Zhang, Christopher John Mungall, Melissa A Haendel, Peter Nick Robinson
The Medical Action Ontology: A Tool for Annotating and Analyzing Treatments and Clinical Management of Human Disease. medRxiv : the preprint server for health sciences (2023)
Michael A Gargano, Nicolas A Matentzoglu, Ben Coleman, Eunice B Addo-Lartey, Anna V Anagnostopoulos, Joel Anderton, Paul Avillach, Anita M Bagley, Eduard Bakštein, James P Balhoff, Gareth Baynam, Susan M Bello, Michael Berk, Holli Bertram, Somer L Bishop, Hannah Blau, David F Bodenstein, Pablo Botas, Kaan Boztug, Jolana Čady, Tiffany J Callahan, Rhiannon Cameron, Seth J Carbon, Francisco Castellanos, J Harry Caufield, Lauren E Chan, Christopher G Chute, Jaime Cruz-Rojo, Noemi Dahan-Oliel, Jon Robert Davids, Maud De Dieuleveult, Vinicius de Souza, Bert B A de Vries, Esther de Vries, J Raymond DePaulo, Beata Derfalvi, Ferdinand Dhombres, Claudia Diaz-Byrd, Alexander J M Dingemans, Bruno Donadille, Michael Henri Duyzend, Reem Elfeky, Shahim Essaid, Carolina Fabrizzi, Giovanna Fico, Helen V Firth, Yun Freudenberg-Hua, Janice M Fullerton, Davera L Gabriel, Kimberley C Gilmour, Jessica L Giordano, Fernando S Goes, Rachel Gore Moses, Ian Green, Matthias Griese, Tudor Groza, Weihong Gu, Julia Pazmandi, Benjamin M Gyori, Ada Hamosh, Marc Hanauer, Kateřina Hanušová, Yongqun Oliver He, Harshad Hegde, Ingo Helbig, Kateřina Řehořová, Charles Tapley Hoyt, Shangzhi Huang, Eric Hurwitz, Julius O B Jacobsen, Xiaofeng Jiang, Lisa Joseph, Kamyar Keramatian, Bryan King, Katrin Knoflach, David A Koolen, Megan L Kraus, Carlo Kroll, Maaike A A Kusters, Markus S Ladewig, David Lagorce, Meng-Chuan Lai, Pablo Lapunzina, Bryan Laraway, David Lewis-Smith, Xiarong Li, Caterina Lucano, Marzieh Majd, Mary L Marazita, Victor Martínez-González, Toby H McHenry, Melvin G McInnis, Julie A McMurry, Michaela Zelinová, Caitlin E Millett, Philip B Mitchell, Veronika Moslerová, Kenji Narutomi, Shahrzad Nematollahi, Julián Nevado, Andrew A Nierenberg, Nikola Novák Čajbiková, Michael C Neale, Soichi Ogishima, Daniel Olson, Abigail Ortiz, Harry Pachajoa, Guiomar Perez de Nanclares, Amy T Peters, Timothy Putman, Christina K Rapp, Ana Rath, Justin T Reese, Lauren Rekerle, Angharad M Roberts, Suzy Roy, Stephan J Sanders, Catharina Schuetz, Eva C Schulte, Thomas G Schulze, Martin Schwarz, Katie Scott, Dominik Seelow, Berthold Seitz, Yiping Shen, Morgan N Similuk, Eric S Simon, Balwinder Singh, Damian Smedley, Cynthia L Smith, Jake T Smolinsky, Sarah H Sperry, Elizabeth Stafford, Ray Stefancsik, Robin Steinhaus, Rebecca Strawbridge, Jagadish Chandrabose Sundaramurthi, Polina Talapova, Jair Antonio Tenorio Castaño, Pavel Tesner, Rhys Huw Thomas, Audrey Thurm, Marek Turnovec, Marielle E van Gijn, Nicole A Vasilevsky, Markéta Vlčková, Anita Walden, Kai Wang, Ronald J Wapner, James Simon Ware, Addo A Wiafe, Samuel A Wiafe, Lisa D Wiggins, Andrew E Williams, Chen Wu, Margot Julia Wyrwoll, Hui Xiong, Nefize Yalin, Yasunori Yamamoto, Lakshmi N Yatham, Anastasia K Yocum, Allan H Young, Zafer Yüksel, Peter P Zandi, Andreas Zankl, Ignacio Zarante, Miroslav Zvolský, Sabrina Toro, Leigh C Carmody, Nomi L Harris, Monica C Munoz-Torres, Daniel Danis, Christopher John Mungall, Sebastian Koehler, Melissa A Haendel, Peter Nick Robinson
The Human Phenotype Ontology in 2024: phenotypes around the world. Nucleic acids research (2023)
Peter J Leese, Adit Anand, Andrew T Girvin, Amin Manna, Saaya Patel, Yun Jae Yoo, Rachel Wong, Melissa A Haendel, Christopher G Chute, Tellen D Bennett, Janos G Hajagos, Emily Rose Pfaff, Richard A Moffitt
Clinical encounter heterogeneity and methods for resolving in networked EHR data: a study from N3C and RECOVER programs. Journal of the American Medical Informatics Association : JAMIA 30 (6) (2023)
Abhishek Bhatia, Alexander J Preiss, Xuya Xiao, M Daniel Brannock, G Caleb Alexander, Robert F Chew, Megan Fitzgerald, Elaine L Hill, Elizabeth P Kelly, Hemalkumar B Mehta, Charisse R Madlock-Brown, Kenneth J Wilkins, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Emily Rose Pfaff, null null
Effect of Nirmatrelvir/Ritonavir (Paxlovid) on Hospitalization among Adults with COVID-19: an EHR-based Target Trial Emulation from N3C. medRxiv : the preprint server for health sciences (2023)
Alfred Jerrod Anzalone, Jing Sun, Vinson A J, William Howard Beasley, William B Hillegass, Kimberly Murray, Brian M Hendricks, Melissa A Haendel, Carol Reynolds Geary, Kristina L Bailey, Corrine K Hanson, Lucio Miele, Ronald Horswell, Julie A McMurry, J Zachary Porterfield, Michael T Vest, H Timothy Bunnell, Jeremy R Harper, Bradley S Price, Susan L Santangelo, Clifford J Rosen, James C McClay, Sally L Hodder, null null
Community risks for SARS-CoV-2 infection among fully vaccinated US adults by rurality: A retrospective cohort study from the National COVID Cohort Collaborative. PloS one 18 (1) (2023)
Peter J Leese, Adit Anand, Andrew T Girvin, Amin Manna, Saaya Patel, Yun Jae Yoo, Rachel Wong, Melissa A Haendel, Christopher G Chute, Tellen D Bennett, Janos G Hajagos, Emily Rose Pfaff, Richard A Moffitt
Clinical encounter heterogeneity and methods for resolving in networked EHR data: a study from N3C and RECOVER programs. Journal of the American Medical Informatics Association : JAMIA (2023)
Alfred Jerrod Anzalone, Jing Sun, Vinson A J, William Howard Beasley, William B Hillegass, Kimberly Murray, Brian M Hendricks, Melissa A Haendel, Carol Reynolds Geary, Kristina L Bailey, Corrine K Hanson, Lucio Miele, Ronald Horswell, Julie A McMurry, J Zachary Porterfield, Michael T Vest, H Timothy Bunnell, Jeremy R Harper, Bradley S Price, Susan L Santangelo, Clifford J Rosen, James C McClay, Sally L Hodder, null null
Community risks for SARS-CoV-2 infection among fully vaccinated US adults by rurality: A retrospective cohort study from the National COVID Cohort Collaborative. PloS one 18 (1) (2023)
Christine M Suver, Jeremy R Harper, Johanna Jean Loomba, Mary Saltz, Julian Solway, Alfred Jerrod Anzalone, Kellie Walters, Emily Rose Pfaff, Anita Walden, Julie A McMurry, Christopher G Chute, Melissa A Haendel
The N3C governance ecosystem: A model socio-technical partnership for the future of collaborative analytics at scale. Journal of clinical and translational science 7 (1) (2023)
Ray Stefancsik, James P Balhoff, Meghan A Balk, Robyn L Ball, Susan M Bello, Anita R Caron, Elissa J Chesler, Vinícius De Souza, Sarah Gehrke, Melissa A Haendel, Laura W Harris, Nomi L Harris, Arwa Ibrahim, Sebastian Koehler, Nicolas A Matentzoglu, Julie A McMurry, Christopher John Mungall, Monica C Munoz-Torres, Timothy Putman, Peter Nick Robinson, Damian Smedley, Elliot Sollis, Anne E Thessen, Nicole A Vasilevsky, David O Walton, David Osumi-Sutherland
The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences. bioRxiv : the preprint server for biology (2023)
Eli B Levitt, Joseph P Johnson, Scott Mabry, Alfredo Terrero, Byron C Jaeger, Melissa A Haendel, Christopher G Chute, Jonathan H Quade, Brent A Ponce, Steven Theiss, Clay A Spitler, Joey P Johnson
Association Between COVID-19 and Mortality in Hip Fracture Surgery in the National COVID Cohort Collaborative (N3C): A Retrospective Cohort Study. Journal of the American Academy of Orthopaedic Surgeons. Global research & reviews 6 (1) (2022)
Rebecca C Jackson, Nicolas A Matentzoglu, James A Overton, Randi Vita, James P Balhoff, Pier Luigi Buttigieg, Seth J Carbon, Mélanie Courtot, Alexander D Diehl, Damion M Dooley, William D Duncan, Nomi L Harris, Melissa A Haendel, Suzanna E Lewis, Darren A Natale, David Osumi-Sutherland, Alan Ruttenberg, Lynn M Schriml, Barry Smith, Christian J Stoeckert, Nicole A Vasilevsky, Ramona L Walls, Jie Zheng, Christopher John Mungall, Bjoern Peters
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies. Database : the journal of biological databases and curation 2021 (2022)
Emily Rose Pfaff, Charisse R Madlock-Brown, John M Baratta, Abhishek Bhatia, Hannah Davis, Andrew Girvin, Elaine L Hill, Liz Kelly, Kristin Kostka, Johanna Loomba, Julie A McMurry, Rachel Wong, Tellen D Bennett, Richard A Moffitt, Christopher G Chute, Melissa A Haendel, null null, null null
Coding Long COVID: Characterizing a new disease through an ICD-10 lens. medRxiv : the preprint server for health sciences (2022)
Sara E Jones, Katie Rebecca Bradwell, Lauren E Chan, Courtney Olson-Chen, Jessica Tarleton, Kenneth J Wilkins, Qiuyuan Qin, Emily Groene Faherty, Yan Kwan Lau, Catherine Xie, Yu-Han Kao, Michael Norman Liebman, Federico Mariona, Anup P Challa, Li Li, Sarah Jane Ratcliffe, Julie A McMurry, Melissa A Haendel, Rena C Patel, Elaine L Hill
Who is pregnant? defining real-world data-based pregnancy episodes in the National COVID Cohort Collaborative (N3C). medRxiv : the preprint server for health sciences (2022)
Deepak R Unni, Sierra A T Moxon, Michael Bada, Matthew Brush, Richard M Bruskiewich, J Harry Caufield, Paul A Clemons, Vlado Dančík, Michel Dumontier, Karamarie Fecho, Gwênlyn Glusman, Jennifer J Hadlock, Nomi L Harris, Arpita Joshi, Timothy Putman, Guangrong Qin, Stephen A Ramsey, Kent A Shefchek, Harold Solbrig, Karthik Soman, Anne E Thessen, Melissa A Haendel, Chris Bizon, Christopher John Mungall, null null
Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science. Clinical and translational science 15 (8) (2022)
Justin T Reese, Hannah Blau, Timothy Bergquist, Johanna J Loomba, Tiffany J Callahan, Bryan Laraway, Corneliu Antonescu, Elena Casiraghi, Ben Coleman, Michael Gargano, Kenneth Wilkins, Luca Cappelletti, Tommaso Fontana, Nariman Ammar, Blessy Antony, T M Murali, Guy Karlebach, Julie A McMurry, Andrew Williams, Richard Moffitt, Jineta Banerjee, Anthony E Solomonides, Hannah Davis, Kristin Kostka, Giorgio Valentini, David Sahner, Christopher G Chute, Charisse Madlock-Brown, Melissa A Haendel, Peter Nick Robinson, null null
Generalizable Long COVID Subtypes: Findings from the NIH N3C and RECOVER Programs. medRxiv : the preprint server for health sciences (2022)
M Daniel Brannock, Robert F Chew, Alexander J Preiss, Emily C Hadley, Julie A McMurry, Peter J Leese, Andrew T Girvin, Miles Crosskey, Andrea G Zhou, Richard A Moffitt, Michele Jonsson Funk, Emily Rose Pfaff, Melissa A Haendel, Christopher G Chute, null null
Long COVID Risk and Pre-COVID Vaccination: An EHR-Based Cohort Study from the RECOVER Program. medRxiv : the preprint server for health sciences (2022)
Nicolas Matentzoglu, James P Balhoff, Susan M Bello, Chris Bizon, Matthew Brush, Tiffany J Callahan, Christopher G Chute, William D Duncan, Chris T A Evelo, Davera Gabriel, John Graybeal, Alasdair Gray, Benjamin M Gyori, Melissa A Haendel, Henriette Harmse, Nomi L Harris, Ian Harrow, Harshad B Hegde, Amelia L Hoyt, Charles T Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, Hyeongsik Kim, Sebastian Koehler, Thomas Liener, Qinqin Long, James Malone, James A McLaughlin, Julie A McMurry, Sierra Moxon, Monica C Munoz-Torres, David Osumi-Sutherland, James A Overton, Bjoern Peters, Tim Putman, Núria Queralt-Rosinach, Kent Shefchek, Harold Solbrig, Anne E Thessen, Tania Tudorache, Nicole Vasilevsky, Alex H Wagner, Christopher John Mungall
A Simple Standard for Sharing Ontological Mappings (SSSOM). Database : the journal of biological databases and curation 2022 (2022)
Katie Rebecca Bradwell, Jacob T Wooldridge, Benjamin Amor, Tellen D Bennett, Adit Anand, Carolyn Bremer, Yun Jae Yoo, Zhenglong Qian, Steven G Johnson, Emily Rose Pfaff, Andrew T Girvin, Amin Manna, Emily A Niehaus, Stephanie S Hong, Xiaohan Tanner Zhang, Richard L Zhu, Mark Bissell, Nabeel Qureshi, Joel Saltz, Melissa A Haendel, Christopher G Chute, Harold P Lehmann, Richard A Moffitt, null null
Harmonizing units and values of quantitative data elements in a very large nationally pooled electronic health record (EHR) dataset. Journal of the American Medical Informatics Association : JAMIA 29 (7) (2022)
Ben Coleman, Elena Casiraghi, Tiffany J Callahan, Hannah Blau, Lauren Chan, Bryan Laraway, Kevin B Clark, Yochai Reâ Em, Ken R Gersing, Ken Wilkins, Nomi L Harris, Giorgio Valentini, Melissa A Haendel, Justin T Reese, Peter Nick Robinson, null null
Post-COVID Phenotypic Manifestations are Associated with New-Onset Psychiatric Disease: Findings from the NIH N3C and RECOVER Studies. medRxiv : the preprint server for health sciences (2022)
Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P Balhoff, Seth Carbon, Anita R Caron, William D Duncan, Joe E Flack, Melissa A Haendel, Nomi L Harris, William R Hogan, Charles Tapley Hoyt, Rebecca C Jackson, HyeongSik Kim, Huseyin Kir, Martin Larralde, Julie A McMurry, James A Overton, Bjoern Peters, Clare Pilgrim, Ray Stefancsik, Sofia Mc Robb, Sabrina Toro, Nicole A Vasilevsky, Ramona Walls, Christopher John Mungall, David Osumi-Sutherland
Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies. Database : the journal of biological databases and curation 2022 (2022)
Justin T Reese, Ben Coleman, Lauren E Chan, Hannah Blau, Tiffany J Callahan, Luca Cappelletti, Tommaso Fontana, Katie Rebecca Bradwell, Nomi L Harris, Elena Casiraghi, Giorgio Valentini, Guy Karlebach, Rachel R Deer, Julie A McMurry, Melissa A Haendel, Christopher G Chute, Emily Rose Pfaff, Richard A Moffitt, Heidi M Spratt, Jasvinder A Singh, Christopher John Mungall, Andrew E Williams, Peter Nick Robinson
Cyclooxygenase inhibitor use is associated with increased COVID-19 severity. medRxiv : the preprint server for health sciences (2021)
Ben Coleman, Elena Casiraghi, Hannah Blau, Lauren Chan, Melissa A Haendel, Bryan Laraway, Tiffany J Callahan, Rachel R Deer, Ken Wilkins, Justin Reese, Peter Nick Robinson
Increased risk of psychiatric sequelae of COVID-19 is highest early in the clinical course. medRxiv : the preprint server for health sciences (2021)
Jianqiao Li, Margaret A Hojlo, Sampath Chennuri, Nitin Gujral, Heather L Paterson, Kent A Shefchek, Casie A Genetti, Emily L Cohn, Kara C Sewalk, Emily A Garvey, Elizabeth D Buttermore, Nickesha C Anderson, Alan H Beggs, Pankaj B Agrawal, John S Brownstein, Melissa A Haendel, Ingrid A Holm, Joseph Gonzalez-Heydrich, Catherine A Brownstein
Underrepresentation of Phenotypic Variability of 16p13.11 Microduplication Syndrome Assessed With an Online Self-Phenotyping Tool (Phenotypr): Cohort Study. Journal of medical Internet research 23 (3) (2021)
Samantha L Wilson, Gregory P Way, Wout Bittremieux, Jean Paul Armache, Melissa A Haendel, Michael M Hoffman
Sharing biological data: why, when, and how. FEBS letters 595 (7) (2021)
Tellen D Bennett, Richard A Moffitt, Janos G Hajagos, Benjamin Amor, Adit Anand, Mark M Bissell, Katie Rebecca Bradwell, Carolyn Bremer, James Brian Byrd, Alina Denham, Peter E DeWitt, Davera Gabriel, Brian T Garibaldi, Andrew T Girvin, Justin Guinney, Elaine L Hill, Stephanie S Hong, Hunter Jimenez, Ramakanth Kavuluru, Kristin Kostka, Harold P Lehmann, Eli B Levitt, Sandeep K Mallipattu, Amin Manna, Julie A McMurry, Michele M Morris, John Muschelli, Andrew J Neumann, Matvey B Palchuk, Emily Rose Pfaff, Zhenglong Qian, Nabeel Qureshi, Seth Russell, Heidi M Spratt, Anita Walden, Andrew E Williams, Jacob T Wooldridge, Yun Jae Yoo, Xiaohan Tanner Zhang, Richard L Zhu, Christopher P Austin, Joseph Saltz, Kenneth Gersing, Melissa A Haendel, Christopher G Chute
The National COVID Cohort Collaborative: Clinical Characterization and Early Severity Prediction. medRxiv : the preprint server for health sciences (2021)
Blake Martin, Peter E DeWitt, Seth Russell, Adit Anand, Katie Rebecca Bradwell, Carolyn Bremer, Davera Gabriel, Andrew T Girvin, Janos G Hajagos, Julie A McMurry, Andrew J Neumann, Emily Rose Pfaff, Anita Walden, Jacob T Wooldridge, Yun Jae Yoo, Joseph Saltz, Kenneth Gersing, Christopher G Chute, Melissa A Haendel, Richard A Moffitt, Tellen D Bennett
Children with SARS-CoV-2 in the National COVID Cohort Collaborative (N3C). medRxiv : the preprint server for health sciences (2021)
Halie M Rando, Tellen D Bennett, James Brian Byrd, Carolyn T Bramante, Tiffany J Callahan, Christopher G Chute, Hannah E Davis, Rachel R Deer, Joel J Gagnier, Farrukh M Koraishy, Feifan Liu, Julie A McMurry, Richard A Moffitt, Emily Rose Pfaff, Justin T Reese, Rose Relevo, Peter Nick Robinson, Joseph Saltz, Anthony E Solomonides, Anupam Ashutosh Sule, Umit Topaloglu, Melissa A Haendel
Challenges in defining Long COVID: Striking differences across literature, Electronic Health Records, and patient-reported information. medRxiv : the preprint server for health sciences (2021)
Nicole A Vasilevsky, Mohammad Hosseini, Samantha Teplitzky, Violeta Ilik, Ehsan Mohammadi, Juliane Schneider, Barbara Kern, Julien Colomb, Scott C Edmunds, Karen Gutzman, Daniel Scott Himmelstein, Marijane White, Britton Smith, Lisa O'Keefe, Melissa A Haendel, Kristi L Holmes
Is authorship sufficient for today's collaborative research? A call for contributor roles. Accountability in research 28 (1) (2020)
Catherine Tcheandjieu, Matthew Aguirre, Stefan Gustafsson, Priyanka Saha, Praneetha Potiny, Melissa A Haendel, Erik Ingelsson, Manuel A Rivas, James R Priest
A phenome-wide association study of 26 mendelian genes reveals phenotypic expressivity of common and rare variants within the general population. PLoS genetics 16 (11) (2020)
Alex H Wagner, Brian Walsh, Georgia Mayfield, David Tamborero, Dmitriy Sonkin, Kilannin Krysiak, Jordi Deu-Pons, Ryan P Duren, Jianjiong Gao, Julie McMurry, Sara Patterson, Catherine Del Vecchio Fitz, Beth A Pitel, Ozman U Sezerman, Kyle Ellrott, Jeremy L Warner, Damian T Rieke, Tero Aittokallio, Ethan Cerami, Deborah I Ritter, Lynn M Schriml, Robert R Freimuth, Melissa A Haendel, Gordana Raca, Subha Madhavan, Michael Baudis, Jacques S Beckmann, Rodrigo Dienstmann, Debyani Chakravarty, Xuan Shirley Li, Susan Mockus, Olivier Elemento, Nikolaus Schultz, Nuria Lopez-Bigas, Mark Lawler, Jeremy Goecks, Malachi Griffith, Malachi Griffith, Adam A Margolin, null null
A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer. Nature genetics 52 (4) (2020)
Anne E Thessen, Ramona L Walls, Lars Vogt, Jessica Singer, Robert Warren, Pier Luigi Buttigieg, James P Balhoff, Christopher John Mungall, Deborah L McGuinness, Brian J Stucky, Matthew J Yoder, Melissa A Haendel
Transforming the study of organisms: Phenomic data models and knowledge bases. PLoS computational biology 16 (11) (2020)
Pilar Cacheiro, Melissa A Haendel, Damian Smedley, null null
New models for human disease from the International Mouse Phenotyping Consortium. Mammalian genome : official journal of the International Mammalian Genome Society 30 (5-6) (2019)

Melissa A Haendel.css-eqlu8i{font-size:small;padding-left:4px;} (Melissa Haendel)

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Melissa A Haendel (Melissa Haendel)