Debashis Ghosh

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 53

Top Topics

Convolutional Neural Network

Chronic Obstructive Pulmonary Disease

Top Venues

Pediatric diabetes

Bioengineering (Basel, Switzerland)

Statistics in medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Elise N Grover, Andrea G Buchwald, Debashis Ghosh, Elizabeth J Carlton
Does behavior mediate the effect of weather on SARS-CoV-2 transmission? evidence from cell-phone data. PloS one 19 (6) (2024)
Tusharkanti Ghosh, Ryan M Baxter, Souvik Seal, Victor G Lui, Pratyaydipta Rudra, Thao Vu, Elena W Y Hsieh, Debashis Ghosh
cytoKernel: Robust kernel embeddings for assessing differential expression of single cell data. bioRxiv : the preprint server for biology (2024)
David R Johnson, Debashis Ghosh, Brandie D Wagner, Elizabeth J Carlton
Did COVID-19 ICU patient mortality risk increase as Colorado hospitals filled? A retrospective cohort study. BMJ open 14 (5) (2024)
Elise N Grover, Andrea G Buchwald, Debashis Ghosh, Elizabeth J Carlton
Does behavior mediate the effect of weather on SARS-CoV-2 transmission? evidence from cell-phone data. PloS one 19 (6) (2024)
Elise N Grover, Andrea G Buchwald, Debashis Ghosh, Elizabeth J Carlton
Does behavior mediate the effect of weather on SARS-CoV-2 transmission? evidence from cell-phone data. PloS one 19 (6) (2024)
Xinyi Yang, Michael Silosky, Jonathan Wehrend, Daniel V Litwiller, Muthiah Nachiappan, Scott D Metzler, Debashis Ghosh, Fuyong Xing, Bennett B Chin
Improving Generalizability of PET DL Algorithms: List-Mode Reconstructions Improve DOTATATE PET Hepatic Lesion Detection Performance. Bioengineering (Basel, Switzerland) 11 (3) (2024)
Xinyi Yang, Michael Silosky, Jonathan Wehrend, Daniel V Litwiller, Muthiah Nachiappan, Scott D Metzler, Debashis Ghosh, Fuyong Xing, Bennett B Chin
Improving Generalizability of PET DL Algorithms: List-Mode Reconstructions Improve DOTATATE PET Hepatic Lesion Detection Performance. Bioengineering (Basel, Switzerland) 11 (3) (2024)
Ryan M Baxter, Berenice Cabrera-Martinez, Tusharkanti Ghosh, Cody Rester, Miguel Guerrero Moreno, Tyler L Borko, Sean Selva, Chelsie L Fleischer, Nicola Haakonsen, Ariana Mayher, Emily Bowhay, Courtney Evans, Todd M Miller, Leah Huey, Jennifer McWilliams, Adrie van Bokhoven, Kevin D Deane, Vijaya Knight, Kimberley R Jordan, Debashis Ghosh, Jared Klarquist, Ross M Kedl, Amanda L Piquet, Elena W Y Hsieh
SARS-CoV-2 Vaccine-Elicited Immunity after B Cell Depletion in Multiple Sclerosis. ImmunoHorizons 8 (3) (2024)
David R Johnson, Debashis Ghosh, Brandie D Wagner, Elizabeth J Carlton
Did COVID-19 ICU patient mortality risk increase as Colorado hospitals filled? A retrospective cohort study. BMJ open 14 (5) (2024)
David R Johnson, Debashis Ghosh, Brandie D Wagner, Elizabeth J Carlton
Did COVID-19 ICU patient mortality risk increase as Colorado hospitals filled? A retrospective cohort study. BMJ open 14 (5) (2024)
Elise N Grover, Andrea G Buchwald, Debashis Ghosh, Elizabeth J Carlton
Does behavior mediate the effect of weather on SARS-CoV-2 transmission? evidence from cell-phone data. PloS one 19 (6) (2024)
Xinyi Yang, Michael Silosky, Jonathan Wehrend, Daniel V Litwiller, Muthiah Nachiappan, Scott D Metzler, Debashis Ghosh, Fuyong Xing, Bennett B Chin
Improving Generalizability of PET DL Algorithms: List-Mode Reconstructions Improve DOTATATE PET Hepatic Lesion Detection Performance. Bioengineering (Basel, Switzerland) 11 (3) (2024)
Ryan M Baxter, Berenice Cabrera-Martinez, Tusharkanti Ghosh, Cody Rester, Miguel Guerrero Moreno, Tyler L Borko, Sean Selva, Chelsie L Fleischer, Nicola Haakonsen, Ariana Mayher, Emily Bowhay, Courtney Evans, Todd M Miller, Leah Huey, Jennifer McWilliams, Adrie van Bokhoven, Kevin D Deane, Vijaya Knight, Kimberley R Jordan, Debashis Ghosh, Jared Klarquist, Ross M Kedl, Amanda L Piquet, Elena W Y Hsieh
SARS-CoV-2 Vaccine-Elicited Immunity after B Cell Depletion in Multiple Sclerosis. ImmunoHorizons 8 (3) (2024)
Ryan M Baxter, Berenice Cabrera-Martinez, Tusharkanti Ghosh, Cody Rester, Miguel Guerrero Moreno, Tyler L Borko, Sean Selva, Chelsie L Fleischer, Nicola Haakonsen, Ariana Mayher, Emily Bowhay, Courtney Evans, Todd M Miller, Leah Huey, Jennifer McWilliams, Adrie van Bokhoven, Kevin D Deane, Vijaya Knight, Kimberley R Jordan, Debashis Ghosh, Jared Klarquist, Ross M Kedl, Amanda L Piquet, Elena W Y Hsieh
SARS-CoV-2 Vaccine-Elicited Immunity after B Cell Depletion in Multiple Sclerosis. ImmunoHorizons 8 (3) (2024)
Xinyi Yang, Michael Silosky, Jonathan Wehrend, Daniel V Litwiller, Muthiah Nachiappan, Scott D Metzler, Debashis Ghosh, Fuyong Xing, Bennett B Chin
Improving Generalizability of PET DL Algorithms: List-Mode Reconstructions Improve DOTATATE PET Hepatic Lesion Detection Performance. Bioengineering (Basel, Switzerland) 11 (3) (2024)
Souvik Seal, Benjamin G Bitler, Debashis Ghosh
SMASH: Scalable Method for Analyzing Spatial Heterogeneity of genes in spatial transcriptomics data. PLoS genetics 19 (10) (2023)
Randi K Johnson, Amanda J Ireton, Patrick M Carry, Lauren A Vanderlinden, Fran Dong, Alex Romero, David R Johnson, Debashis Ghosh, Fan Yang, Brigitte Frohnert, Ivana V Yang, Katerina J Kechris, Marian Rewers, Jill M Norris
DNA Methylation Near DLGAP2 May Mediate the Relationship between Family History of Type 1 Diabetes and Type 1 Diabetes Risk. Pediatric diabetes 2023 (2023)
Randi K Johnson, Amanda J Ireton, Patrick M Carry, Lauren A Vanderlinden, Fran Dong, Alex Romero, David R Johnson, Debashis Ghosh, Fan Yang, Brigitte Frohnert, Ivana V Yang, Katerina J Kechris, Marian Rewers, Jill M Norris
DNA Methylation Near DLGAP2 May Mediate the Relationship between Family History of Type 1 Diabetes and Type 1 Diabetes Risk. Pediatric diabetes 2023 (2023)
Randi K Johnson, Amanda J Ireton, Patrick M Carry, Lauren A Vanderlinden, Fran Dong, Alex Romero, David R Johnson, Debashis Ghosh, Fan Yang, Brigitte Frohnert, Ivana V Yang, Katerina J Kechris, Marian Rewers, Jill M Norris
DNA Methylation Near DLGAP2 May Mediate the Relationship between Family History of Type 1 Diabetes and Type 1 Diabetes Risk. Pediatric diabetes 2023 (2023)
Randi K Johnson, Amanda J Ireton, Patrick M Carry, Lauren A Vanderlinden, Fran Dong, Alex Romero, David R Johnson, Debashis Ghosh, Fan Yang, Brigitte Frohnert, Ivana V Yang, Katerina J Kechris, Marian Rewers, Jill M Norris
DNA Methylation Near DLGAP2 May Mediate the Relationship between Family History of Type 1 Diabetes and Type 1 Diabetes Risk. Pediatric diabetes 2023 (2023)
Eric W Prince, Debashis Ghosh, Carsten Görg, Todd C Hankinson
Uncertainty-Aware Deep Learning Classification of Adamantinomatous Craniopharyngioma from Preoperative MRI. Diagnostics (Basel, Switzerland) 13 (6) (2023)
Eric W Prince, Debashis Ghosh, Carsten Görg, Todd C Hankinson
Uncertainty-Aware Deep Learning Classification of Adamantinomatous Craniopharyngioma from Preoperative MRI. Diagnostics (Basel, Switzerland) 13 (6) (2023)
Yonghua Zhuang, Fuyong Xing, Debashis Ghosh, Brian D Hobbs, Craig P Hersh, Farnoush Banaei-Kashani, Russell P Bowler, Katerina J Kechris
Deep learning on graphs for multi-omics classification of COPD. PloS one 18 (4) (2023)
Yonghua Zhuang, Fuyong Xing, Debashis Ghosh, Brian D Hobbs, Craig P Hersh, Farnoush Banaei-Kashani, Russell P Bowler, Katerina J Kechris
Deep learning on graphs for multi-omics classification of COPD. PloS one 18 (4) (2023)
Randi K Johnson, Amanda J Ireton, Patrick M Carry, Lauren A Vanderlinden, Fran Dong, Alex Romero, David R Johnson, Debashis Ghosh, Fan Yang, Brigitte Frohnert, Ivana V Yang, Katerina J Kechris, Marian Rewers, Jill M Norris
DNA Methylation Near DLGAP2 May Mediate the Relationship between Family History of Type 1 Diabetes and Type 1 Diabetes Risk. Pediatric diabetes 2023 (2023)
Yonghua Zhuang, Fuyong Xing, Debashis Ghosh, Brian D Hobbs, Craig P Hersh, Farnoush Banaei-Kashani, Russell P Bowler, Katerina J Kechris
Deep learning on graphs for multi-omics classification of COPD. PloS one 18 (4) (2023)
Yonghua Zhuang, Fuyong Xing, Debashis Ghosh, Brian D Hobbs, Craig P Hersh, Farnoush Banaei-Kashani, Russell P Bowler, Katerina J Kechris
Deep learning on graphs for multi-omics classification of COPD. PloS one 18 (4) (2023)
Yonghua Zhuang, Fuyong Xing, Debashis Ghosh, Brian D Hobbs, Craig P Hersh, Farnoush Banaei-Kashani, Russell P Bowler, Katerina J Kechris
Deep learning on graphs for multi-omics classification of COPD. PloS one 18 (4) (2023)
Yonghua Zhuang, Fuyong Xing, Debashis Ghosh, Brian D Hobbs, Craig P Hersh, Farnoush Banaei-Kashani, Russell P Bowler, Katerina J Kechris
Deep learning on graphs for multi-omics classification of COPD. PloS one 18 (4) (2023)
Yonghua Zhuang, Fuyong Xing, Debashis Ghosh, Brian D Hobbs, Craig P Hersh, Farnoush Banaei-Kashani, Russell P Bowler, Katerina J Kechris
Deep learning on graphs for multi-omics classification of COPD. PloS one 18 (4) (2023)
Yonghua Zhuang, Fuyong Xing, Debashis Ghosh, Brian D Hobbs, Craig P Hersh, Farnoush Banaei-Kashani, Russell P Bowler, Katerina J Kechris
Deep learning on graphs for multi-omics classification of COPD. PloS one 18 (4) (2023)
Souvik Seal, Thao Vu, Tusharkanti Ghosh, Julia Wrobel, Debashis Ghosh
DenVar: density-based variation analysis of multiplex imaging data. Bioinformatics advances 2 (1) (2022)
Souvik Seal, Thao Vu, Tusharkanti Ghosh, Julia Wrobel, Debashis Ghosh
DenVar: density-based variation analysis of multiplex imaging data. Bioinformatics advances 2 (1) (2022)
Pratyaydipta Rudra, Ryan Baxter, Elena W Y Hsieh, Debashis Ghosh
Compositional Data Analysis using Kernels in mass cytometry data. Bioinformatics advances 2 (1) (2022)
Kevin P Josey, Fan Yang, Debashis Ghosh, Sridharan Raghaven
A calibration approach to transportability and data-fusion with observational data. Statistics in medicine 41 (23) (2022)
Debashis Ghosh
Sufficient Dimension Reduction: An Information-Theoretic Viewpoint. Entropy (Basel, Switzerland) 24 (2) (2022)
Cameron Severn, Krithika Suresh, Carsten Görg, Yoon Seong Choi, Rajan Jain, Debashis Ghosh
A Pipeline for the Implementation and Visualization of Explainable Machine Learning for Medical Imaging Using Radiomics Features. Sensors (Basel, Switzerland) 22 (14) (2022)
Shuozhi Zuo, Kevin P Josey, Sridharan Raghaven, Fan Yang, Elizabeth Juaréz-Colunga, Debashis Ghosh
Transportability Methods for Time-to-Event Outcomes: Application in Adjuvant Colon Cancer Trials. JCO clinical cancer informatics 6 (2022)
Shuozhi Zuo, Kevin P Josey, Sridharan Raghaven, Fan Yang, Elizabeth Juaréz-Colunga, Debashis Ghosh
Transportability Methods for Time-to-Event Outcomes: Application in Adjuvant Colon Cancer Trials. JCO clinical cancer informatics 6 (2022)
Souvik Seal, Debashis Ghosh
MIAMI: mutual information-based analysis of multiplex imaging data. Bioinformatics (Oxford, England) 38 (15) (2022)
Thao Vu, Julia Wrobel, Benjamin G Bitler, Erin L Schenk, Kimberley R Jordan, Debashis Ghosh
SPF: A spatial and functional data analytic approach to cell imaging data. PLoS computational biology 18 (6) (2022)
Charlie M Carpenter, Weiming Zhang, Lucas Gillenwater, Cameron Severn, Tusharkanti Ghosh, Russell P Bowler, Katerina J Kechris, Debashis Ghosh
PaIRKAT: A pathway integrated regression-based kernel association test with applications to metabolomics and COPD phenotypes. PLoS computational biology 17 (10) (2021)
Kevin P Josey, Seth A Berkowitz, Debashis Ghosh, Sridharan Raghaven
Transporting experimental results with entropy balancing. Statistics in medicine 40 (19) (2021)
Joseph L Sottnik, Lauren Vanderlinden, Molishree Joshi, Ana Chauca-Diaz, Charles Owens, Donna E Hansel, Colin Sempeck, Debashis Ghosh, Dan Theodorescu
Androgen Receptor Regulates CD44 Expression in Bladder Cancer. Cancer research 81 (11) (2021)
Ajay Major, Derek E Smith, Debashis Ghosh, Rachel Rabinovitch, Manali Kamdar
Risk and subtypes of secondary primary malignancies in diffuse large B-cell lymphoma survivors change over time based on stage at diagnosis. Cancer 126 (1) (2019)
Seth Russell, Tellen D Bennett, Debashis Ghosh
Software engineering principles to improve quality and performance of R software. PeerJ. Computer science 5 (2019)
Alexandria M Jensen, Jason R Tregellas, Brianne Mohl, Fuyong Xing, Debashis Ghosh
Kernel machine tests of association between brain networks and phenotypes. PloS one 14 (3) (2019)
Jothi Anantharajan, Hengbo Zhou, Lingdi Zhang, Taylor Hotz, Melanie Y Vincent, Melanie A Blevins, Anna E Jansson, John Wee Liang Kuan, Elizabeth Yihui Ng, Yee Khoon Yeo, Nithya Baburajendran, Grace Lin, Alvin W Hung, Joma Joy, Samarjit Patnaik, Juan Marugan, Pratyaydipta Rudra, Debashis Ghosh, Jeffrey Hill, Thomas H Keller, Rui Zhao, Heide L Ford, CongBao Kang
Structural and Functional Analyses of an Allosteric EYA2 Phosphatase Inhibitor That Has On-Target Effects in Human Lung Cancer Cells. Molecular cancer therapeutics 18 (9) (2019)
Debashis Ghosh
Relaxed covariate overlap and margin-based causal effect estimation. Statistics in medicine 37 (28) (2018)
Pamela H Russell, Debashis Ghosh
Radtools: R utilities for convenient extraction of medical image metadata. F1000Research (2018)
Pamela H Russell, Debashis Ghosh
Radtools: R utilities for convenient extraction of medical image metadata. F1000Research 7 (2018)
Pamela H Russell, Debashis Ghosh
Radtools: R utilities for smooth navigation of medical image data. F1000Research (2018)
Youngjoo Cho, Chen Hu, Debashis Ghosh
Covariate adjustment using propensity scores for dependent censoring problems in the accelerated failure time model. Statistics in medicine 37 (3) (2017)