Eric C Rouchka (Eric Rouchka)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 61

Top Topics

Particulate Matter

Breast Cancer Cells

Gene Expression

Top Venues

bioRxiv : the preprint server for biology

medRxiv : the preprint server for health sciences

This page only lists publications with an associated author ORCID identifier.

Publications

Jingjing Zhao, Ngozi Adiele, Daniel Gomes, Marina Malovichko, Daniel J Conklin, Abigail Ekuban, Jianzhu Luo, Tyler Gripshover, Walter H Watson, Mayukh Banerjee, Melissa L Smith, Eric C Rouchka, Raobo Xu, Xiang Zhang, Dibson D Gondim, Matthew C Cave, Timothy E O'Toole
Obesogenic polystyrene microplastic exposures disrupt the gut-liver-adipose axis. Toxicological sciences : an official journal of the Society of Toxicology 198 (2) (2024)
Rochelle H Holm, Grzegorz A Rempała, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
Dynamic SARS-CoV-2 surveillance model combining seroprevalence and wastewater concentrations for post-vaccine disease burden estimates. Communications medicine 4 (1) (2024)
Francisco J Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark E Diekhans, Silvia Carbonell-Sala, Brian A Williams, Jane E Loveland, Maite De María, Matthew S Adams, Gabriela Balderrama-Gutierrez, Amit K Behera, Jose Manuel Gonzalez, Toby Hunt, Julien Lagarde, Cindy E Liang, Haoran Li, Marcus Jerryd Meade, David A Moraga Amador, Andrey D Prjibelski, Inanc Birol, Hamed Bostan, Ashley M Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R M Du, Colette Felton, Jonathan Goke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian-Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E Ritchie, Andre D Sim, Alison D Tang, Yuk Kei Wan, Changqing Wang, Brandon Y Wong, Chen Yang, If Barnes, Andrew E Berry, Salvador Capella, Alyssa Cousineau, Namrita Dhillon, José María Fernandez, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernandez-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M Mudge, Nedka G Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Laird Smith, Marie-Marthe Suner, Hazuki Takahashi, Ingrid A Youngworth, Piero Carnici, Nancy D Denslow, Roderic Guigo, Margaret E Hunter, René Maehr, Yin Shen, Hagen U Tilgner, Barbara J Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria M Sheynkman, Ali Mortazavi, Ana Conesa, Angela N Brooks
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Nature methods 21 (7) (2024)
Müge Sak, Julia H Chariker, Juw Won Park, Eric C Rouchka
Gene expression and alternative splicing analysis in a large-scale Multiple Sclerosis study. medRxiv : the preprint server for health sciences (2024)
Haley Asplund, Hector H Dreyer, Richa Singhal, Eric C Rouchka, Timothy E O'Toole, Petra Haberzettl, Daniel J Conklin, Brian E Sansbury
Exposure to Fine Particulate Matter Air Pollution Disrupts Erythrocyte Turnover. Circulation research 134 (9) (2024)
Jingjing Zhao, Ngozi Adiele, Daniel Gomes, Marina Malovichko, Daniel J Conklin, Abigail Ekuban, Jianzhu Luo, Tyler Gripshover, Walter H Watson, Mayukh Banerjee, Melissa L Smith, Eric C Rouchka, Raobo Xu, Xiang Zhang, Dibson D Gondim, Matthew C Cave, Timothy E O'Toole
Obesogenic polystyrene microplastic exposures disrupt the gut-liver-adipose axis. Toxicological sciences : an official journal of the Society of Toxicology 198 (2) (2024)
Haley Asplund, Hector H Dreyer, Richa Singhal, Eric C Rouchka, Timothy E O'Toole, Petra Haberzettl, Daniel J Conklin, Brian E Sansbury
Exposure to Fine Particulate Matter Air Pollution Disrupts Erythrocyte Turnover. Circulation research 134 (9) (2024)
Rochelle H Holm, Grzegorz A Rempała, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
Dynamic SARS-CoV-2 surveillance model combining seroprevalence and wastewater concentrations for post-vaccine disease burden estimates. Communications medicine 4 (1) (2024)
Francisco J Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark E Diekhans, Silvia Carbonell-Sala, Brian A Williams, Jane E Loveland, Maite De María, Matthew S Adams, Gabriela Balderrama-Gutierrez, Amit K Behera, Jose Manuel Gonzalez, Toby Hunt, Julien Lagarde, Cindy E Liang, Haoran Li, Marcus Jerryd Meade, David A Moraga Amador, Andrey D Prjibelski, Inanc Birol, Hamed Bostan, Ashley M Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R M Du, Colette Felton, Jonathan Goke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian-Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E Ritchie, Andre D Sim, Alison D Tang, Yuk Kei Wan, Changqing Wang, Brandon Y Wong, Chen Yang, If Barnes, Andrew E Berry, Salvador Capella, Alyssa Cousineau, Namrita Dhillon, José María Fernandez, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernandez-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M Mudge, Nedka G Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Laird Smith, Marie-Marthe Suner, Hazuki Takahashi, Ingrid A Youngworth, Piero Carnici, Nancy D Denslow, Roderic Guigo, Margaret E Hunter, René Maehr, Yin Shen, Hagen U Tilgner, Barbara J Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria M Sheynkman, Ali Mortazavi, Ana Conesa, Angela N Brooks
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Nature methods (2024)
Francisco J Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark E Diekhans, Silvia Carbonell-Sala, Brian A Williams, Jane E Loveland, Maite De María, Matthew S Adams, Gabriela Balderrama-Gutierrez, Amit K Behera, Jose Manuel Gonzalez, Toby Hunt, Julien Lagarde, Cindy E Liang, Haoran Li, Marcus Jerryd Meade, David A Moraga Amador, Andrey D Prjibelski, Inanc Birol, Hamed Bostan, Ashley M Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R M Du, Colette Felton, Jonathan Goke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian-Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E Ritchie, Andre D Sim, Alison D Tang, Yuk Kei Wan, Changqing Wang, Brandon Y Wong, Chen Yang, If Barnes, Andrew E Berry, Salvador Capella, Alyssa Cousineau, Namrita Dhillon, José María Fernandez, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernandez-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M Mudge, Nedka G Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Laird Smith, Marie-Marthe Suner, Hazuki Takahashi, Ingrid A Youngworth, Piero Carnici, Nancy D Denslow, Roderic Guigo, Margaret E Hunter, René Maehr, Yin Shen, Hagen U Tilgner, Barbara J Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria M Sheynkman, Ali Mortazavi, Ana Conesa, Angela N Brooks
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Nature methods 21 (7) (2024)
Rochelle H Holm, Grzegorz A Rempała, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
Dynamic SARS-CoV-2 surveillance model combining seroprevalence and wastewater concentrations for post-vaccine disease burden estimates. Communications medicine 4 (1) (2024)
Müge Sak, Julia H Chariker, Juw Won Park, Eric C Rouchka
Gene expression and alternative splicing analysis in a large-scale Multiple Sclerosis study. medRxiv : the preprint server for health sciences (2024)
Francisco J Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark E Diekhans, Silvia Carbonell-Sala, Brian A Williams, Jane E Loveland, Maite De María, Matthew S Adams, Gabriela Balderrama-Gutierrez, Amit K Behera, Jose Manuel Gonzalez, Toby Hunt, Julien Lagarde, Cindy E Liang, Haoran Li, Marcus Jerryd Meade, David A Moraga Amador, Andrey D Prjibelski, Inanc Birol, Hamed Bostan, Ashley M Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R M Du, Colette Felton, Jonathan Goke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian-Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E Ritchie, Andre D Sim, Alison D Tang, Yuk Kei Wan, Changqing Wang, Brandon Y Wong, Chen Yang, If Barnes, Andrew E Berry, Salvador Capella, Alyssa Cousineau, Namrita Dhillon, José María Fernandez, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernandez-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M Mudge, Nedka G Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Laird Smith, Marie-Marthe Suner, Hazuki Takahashi, Ingrid A Youngworth, Piero Carnici, Nancy D Denslow, Roderic Guigo, Margaret E Hunter, René Maehr, Yin Shen, Hagen U Tilgner, Barbara J Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria M Sheynkman, Ali Mortazavi, Ana Conesa, Angela N Brooks
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Nature methods 21 (7) (2024)
Rochelle H Holm, Grzegorz A Rempała, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
Dynamic SARS-CoV-2 surveillance model combining seroprevalence and wastewater concentrations for post-vaccine disease burden estimates. Communications medicine 4 (1) (2024)
Jingjing Zhao, Ngozi Adiele, Daniel Gomes, Marina Malovichko, Daniel J Conklin, Abigail Ekuban, Jianzhu Luo, Tyler Gripshover, Walter H Watson, Mayukh Banerjee, Melissa L Smith, Eric C Rouchka, Raobo Xu, Xiang Zhang, Dibson D Gondim, Matthew C Cave, Timothy E O'Toole
Obesogenic polystyrene microplastic exposures disrupt the gut-liver-adipose axis. Toxicological sciences : an official journal of the Society of Toxicology 198 (2) (2024)
Rochelle H Holm, Grzegorz A Rempała, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
Dynamic SARS-CoV-2 surveillance model combining seroprevalence and wastewater concentrations for post-vaccine disease burden estimates. Communications medicine 4 (1) (2024)
Francisco J Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark E Diekhans, Silvia Carbonell-Sala, Brian A Williams, Jane E Loveland, Maite De María, Matthew S Adams, Gabriela Balderrama-Gutierrez, Amit K Behera, Jose Manuel Gonzalez, Toby Hunt, Julien Lagarde, Cindy E Liang, Haoran Li, Marcus Jerryd Meade, David A Moraga Amador, Andrey D Prjibelski, Inanc Birol, Hamed Bostan, Ashley M Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R M Du, Colette Felton, Jonathan Goke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian-Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E Ritchie, Andre D Sim, Alison D Tang, Yuk Kei Wan, Changqing Wang, Brandon Y Wong, Chen Yang, If Barnes, Andrew E Berry, Salvador Capella, Alyssa Cousineau, Namrita Dhillon, José María Fernandez, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernandez-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M Mudge, Nedka G Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Laird Smith, Marie-Marthe Suner, Hazuki Takahashi, Ingrid A Youngworth, Piero Carnici, Nancy D Denslow, Roderic Guigo, Margaret E Hunter, René Maehr, Yin Shen, Hagen U Tilgner, Barbara J Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria M Sheynkman, Ali Mortazavi, Ana Conesa, Angela N Brooks
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Nature methods 21 (7) (2024)
Francisco J Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark E Diekhans, Silvia Carbonell-Sala, Brian A Williams, Jane E Loveland, Maite De María, Matthew S Adams, Gabriela Balderrama-Gutierrez, Amit K Behera, Jose Manuel Gonzalez, Toby Hunt, Julien Lagarde, Cindy E Liang, Haoran Li, Marcus Jerryd Meade, David A Moraga Amador, Andrey D Prjibelski, Inanc Birol, Hamed Bostan, Ashley M Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R M Du, Colette Felton, Jonathan Goke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian-Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E Ritchie, Andre D Sim, Alison D Tang, Yuk Kei Wan, Changqing Wang, Brandon Y Wong, Chen Yang, If Barnes, Andrew E Berry, Salvador Capella, Alyssa Cousineau, Namrita Dhillon, José María Fernandez, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernandez-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M Mudge, Nedka G Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Laird Smith, Marie-Marthe Suner, Hazuki Takahashi, Ingrid A Youngworth, Piero Carnici, Nancy D Denslow, Roderic Guigo, Margaret E Hunter, René Maehr, Yin Shen, Hagen U Tilgner, Barbara J Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria M Sheynkman, Ali Mortazavi, Ana Conesa, Angela N Brooks
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Nature methods (2024)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Analysis of Nucleotide Variations in Human G-Quadruplex Forming Regions Associated with Disease States. Genes 14 (12) (2023)
Rebekah Eleazer, Kalpani De Silva, Kalina Andreeva, Zoe Jenkins, Nour Osmani, Eric C Rouchka, Yvonne N Fondufe-Mittendorf
PARP1 Regulates Circular RNA Biogenesis though Control of Transcriptional Dynamics. Cells 12 (8) (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Structural and Functional Classification of G-Quadruplex Families within the Human Genome. Genes 14 (3) (2023)
Rebekah Eleazer, Kalpani De Silva, Kalina Andreeva, Zoe Jenkins, Nour Osmani, Eric C Rouchka, Yvonne N Fondufe-Mittendorf
PARP1 Regulates Circular RNA Biogenesis though Control of Transcriptional Dynamics. Cells 12 (8) (2023)
Rochelle H Holm, Grzegorz A Rempala, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
SARS-CoV-2 wastewater concentration and linked longitudinal seroprevalence: a spatial analysis of strain mutation, post-COVID-19 vaccination effect, and hospitalization burden forecasting. medRxiv : the preprint server for health sciences (2023)
Francisco J Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell-Sala, Brian Williams, Jane E Loveland, Maite De María, Matthew S Adams, Gabriela Balderrama-Gutierrez, Amit K Behera, Jose M Gonzalez, Toby Hunt, Julien Lagarde, Cindy E Liang, Haoran Li, Marcus Jerryd Meade, David A Moraga Amador, Andrey D Prjibelski, Inanc Birol, Hamed Bostan, Ashley M Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R M Du, Colette Felton, Jonathan Goke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian-Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E Ritchie, Andre D Sim, Alison D Tang, Yuk Kei Wan, Changqing Wang, Brandon Y Wong, Chen Yang, If Barnes, Andrew Berry, Salvador Capella, Angela N Brooks, Jose M Fernandez-Gonzalez, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Goetz, Carles Hernández-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M Mudge, Nedka G Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Eric C Rouchka, Enrique Sapena, Leon Sheynkman, Melissa Laird Smith, Marie-Marthe Suner, Hazuki Takahashi, Ingrid Ashley Youngworth, Piero Carnici, Nancy D Denslow, Roderic Guigó, Margaret E Hunter, Hagen U Tilgner, Barbara J Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria M Sheynkman, Ali Mortazavi, Ana Conesa
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. bioRxiv : the preprint server for biology (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Structural and Functional Classification of G-Quadruplex Families within the Human Genome. Genes 14 (3) (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Analysis of Nucleotide Variations in Human G-Quadruplex Forming Regions Associated with Disease States. Genes 14 (12) (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Analysis of Nucleotide Variations in Human G-Quadruplex Forming Regions Associated with Disease States. Genes 14 (12) (2023)
Eric C Rouchka, Carlos A Almeida, Randi B House, Jonah C Daneshmand, Julia H Chariker, Sujata Saraswat-Ohri, Cynthia Gomes, Morgan Sharp, Alice Shum-Siu, Greta M Cesarz, Jeffrey C Petruska, David S K Magnuson
Construction of a searchable database for gene expression changes in spinal cord injury experiments. bioRxiv : the preprint server for biology (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Analysis of Nucleotide Variations in Human G-Quadruplex Forming Regions Associated with Disease States. Genes 14 (12) (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Analysis of nucleotide variations in human g-quadruplex forming regions associated with disease states. bioRxiv : the preprint server for biology (2023)
Rochelle H Holm, Grzegorz A Rempala, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
SARS-CoV-2 wastewater concentration and linked longitudinal seroprevalence: a spatial analysis of strain mutation, post-COVID-19 vaccination effect, and hospitalization burden forecasting. medRxiv : the preprint server for health sciences (2023)
Rebekah Eleazer, Kalpani De Silva, Kalina Andreeva, Zoe Jenkins, Nour Osmani, Eric C Rouchka, Yvonne N Fondufe-Mittendorf
PARP1 Regulates Circular RNA Biogenesis though Control of Transcriptional Dynamics. Cells 12 (8) (2023)
Raghava S Ambadapoodi, Forest W Arnold, Julia H Chariker, Alex Glynn, William Lauer, Subathra Marimuthu, Eric C Rouchka, Melissa L Smith, Leslie A Wolf
Persistent SARS-CoV-2 Infection in a Multiple Sclerosis Patient on Ocrelizumab: A Case Report. Research square (2023)
Diego Montoya-Durango, Mary Nancy Walter, Walter Rodriguez, Yali Wang, Julia H Chariker, Eric C Rouchka, Claudio Maldonado, Shirish Barve, Craig J McClain, Leila Gobejishvili
Dysregulated Cyclic Nucleotide Metabolism in Alcohol-Associated Steatohepatitis: Implications for Novel Targeted Therapies. Biology 12 (10) (2023)
Eric C Rouchka, Carlos A Almeida, Randi B House, Jonah C Daneshmand, Julia H Chariker, Sujata Saraswat-Ohri, Cynthia Gomes, Morgan Sharp, Alice Shum-Siu, Greta M Cesarz, Jeffrey C Petruska, David S K Magnuson
Construction of a searchable database for gene expression changes in spinal cord injury experiments. bioRxiv : the preprint server for biology (2023)
Eric C Rouchka, Carlos A Almeida, Randi B House, Jonah C Daneshmand, Julia H Chariker, Sujata Saraswat-Ohri, Cynthia Gomes, Morgan Sharp, Alice Shum-Siu, Greta M Cesarz, Jeffrey C Petruska, David S K Magnuson
Construction of a searchable database for gene expression changes in spinal cord injury experiments. bioRxiv : the preprint server for biology (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Analysis of nucleotide variations in human g-quadruplex forming regions associated with disease states. bioRxiv : the preprint server for biology (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Analysis of nucleotide variations in human g-quadruplex forming regions associated with disease states. bioRxiv : the preprint server for biology (2023)
Rochelle H Holm, Grzegorz A Rempala, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
SARS-CoV-2 wastewater concentration and linked longitudinal seroprevalence: a spatial analysis of strain mutation, post-COVID-19 vaccination effect, and hospitalization burden forecasting. medRxiv : the preprint server for health sciences (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Structural and Functional Classification of G-Quadruplex Families within the Human Genome. Genes 14 (3) (2023)
Aryan Neupane, Julia H Chariker, Eric C Rouchka
Analysis of Nucleotide Variations in Human G-Quadruplex Forming Regions Associated with Disease States. Genes 14 (12) (2023)
Rochelle H Holm, Grzegorz A Rempala, Boseung Choi, J Michael Brick, Alok R Amraotkar, Rachel J Keith, Eric C Rouchka, Julia H Chariker, Kenneth E Palmer, Ted Smith, Aruni Bhatnagar
SARS-CoV-2 wastewater concentration and linked longitudinal seroprevalence: a spatial analysis of strain mutation, post-COVID-19 vaccination effect, and hospitalization burden forecasting. medRxiv : the preprint server for health sciences (2023)
Richa A Singhal, Rachel Lukose, Gwenyth Carr, Afsoon Moktar, Ana Lucia Gonzales-Urday, Eric C Rouchka, Bathri N Vajravelu
Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling. JMIR bioinformatics and biotechnology 3 (1) (2022)
Cassandra R Woolley, Julia H Chariker, Eric C Rouchka, Easton E Ford, Elizabeth A Hudson, Sabine J Waigel, Melissa Laird Smith, Thomas C Mitchell
Reference long-read isoform-aware transcriptomes of 4 human peripheral blood lymphocyte subsets. G3 (Bethesda, Md.) 12 (11) (2022)
Claire E Jones, Kevin J Sokoloski, Eric C Rouchka, Julia H Chariker, Rochelle H Holm, Ray A Yeager, Joseph B Moore, Erin M Elliott, Daymond Talley, Aruni Bhatnagar, Ted Smith
The Detection of Periodic Reemergence Events of SARS-CoV-2 Delta Strain in Communities Dominated by Omicron. Pathogens (Basel, Switzerland) 11 (11) (2022)
Richa A Singhal, Rachel Lukose, Gwenyth Carr, Afsoon Moktar, Ana Lucia Gonzales-Urday, Eric C Rouchka, Bathri N Vajravelu
Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling. JMIR bioinformatics and biotechnology 3 (1) (2022)
Anne E Geller, Rejeena Shrestha, Matthew R Woeste, Haixun Guo, Xiaoling Hu, Chuanlin Ding, Kalina Andreeva, Julia H Chariker, Mingqian Zhou, David Tieri, Corey T Watson, Robert A Mitchell, Huang-Ge Zhang, Yan Li, Robert C G Martin Ii, Eric C Rouchka, Jun Yan
The induction of peripheral trained immunity in the pancreas incites anti-tumor activity to control pancreatic cancer progression. Nature communications 13 (1) (2022)
Carolyn M Klinge, Kellianne M Piell, Christine Schaner Tooley, Eric C Rouchka
Author Correction: HNRNPA2/B1 is upregulated in endocrine-resistant LCC9 breast cancer cells and alters the miRNA transcriptome when overexpressed in MCF-7 cells. Scientific reports 11 (1) (2021)
Xiaohong Li, Petra Haberzettl, Daniel J Conklin, Aruni Bhatnagar, Eric C Rouchka, Mei Zhang, Timothy E O'Toole
Exposure to Fine Particulate Matter Air Pollution Alters mRNA and miRNA Expression in Bone Marrow-Derived Endothelial Progenitor Cells from Mice. Genes 12 (7) (2021)
Marcus Negron, Jeffrey Kristensen, Van Thuan Nguyen, Lauren E Gansereit, Frank J Raucci, Julia L Chariker, Aaron Heck, Imamulhaq Brula, Gabrielle Kitchen, Cassandra P Awgulewitsch, Lin Zhong, Eric C Rouchka, Simran Banga, Cristi L Galindo
Sex-Based Differences in Cardiac Gene Expression and Function in BDNF Val66Met Mice. International journal of molecular sciences 22 (13) (2021)
Eric C Rouchka, Julia H Chariker, Kumar Saurabh, Sabine Waigel, Wolfgang Zacharias, Mei Zhang, Daymond Talley, Ian Santisteban, Madeline Puccio, Sarah Moyer, Rochelle H Holm, Ray A Yeager, Kevin J Sokoloski, Joshua Fuqua, Aruni Bhatnagar, Ted Smith
The Rapid Assessment of Aggregated Wastewater Samples for Genomic Surveillance of SARS-CoV-2 on a City-Wide Scale. Pathogens (Basel, Switzerland) 10 (10) (2021)
Samuel J Tindell, Eric C Rouchka, Alexey L Arkov
Glial granules contain germline proteins in the Drosophila brain, which regulate brain transcriptome. Communications biology 3 (1) (2020)
Eric C Rouchka, Julia H Chariker, Donghoon Chung
Variant analysis of 1,040 SARS-CoV-2 genomes. PloS one 15 (11) (2020)
Carolyn M Klinge, Kellianne M Piell, Christine Schaner Tooley, Eric C Rouchka
HNRNPA2/B1 is upregulated in endocrine-resistant LCC9 breast cancer cells and alters the miRNA transcriptome when overexpressed in MCF-7 cells. Scientific reports 9 (1) (2019)
Julia H Chariker, Cynthia Gomes, Fiona Brabazon, Kathryn A Harman, Sujata Saraswat Ohri, David S K Magnuson, Scott R Whittemore, Jeffrey C Petruska, Eric C Rouchka
Transcriptome of dorsal root ganglia caudal to a spinal cord injury with modulated behavioral activity. Scientific data 6 (1) (2019)
Rajbir Singh, Sandeep Chandrashekharappa, Sobha R Bodduluri, Becca V Baby, Bindu Hegde, Niranjan G Kotla, Ankita A Hiwale, Taslimarif Saiyed, Paresh Patel, Matam Vijay-Kumar, Morgan G I Langille, Gavin M Douglas, Xi Cheng, Eric C Rouchka, Sabine J Waigel, Gerald W Dryden, Houda Alatassi, Huang-Ge Zhang, Bodduluri Haribabu, Praveen Kumar Vemula, Venkatakrishna R Jala
Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway. Nature communications 10 (1) (2019)
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