Federico Agostini

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2020-2023
Publications (10 Years): 8

Top Venues

Nature communications

Nature biotechnology

Nature protocols

Biology open

Centre for Genomic Regulation (CRG) and University Pompeu Fabra (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

Centre for Genomic Regulation (CRG) and University Pompeu Fabra Nov 01 2010 - Jun 16 2014

Spain

PHD :: Bioinformatics and Genomics

University of Bologna Oct 20 2008 - Oct 16 2010

Italy

MSC

Publications

Francesca Mastropasqua, Marika Oksanen, Cristina Soldini, Shemim Alatar, Abishek Arora, Roberto Ballarino, Maya Molinari, Federico Agostini, Axel Poulet, Michelle Watts, Ielyzaveta Rabkina, Martin Becker, Danyang Li, Britt-Marie Anderlid, Vladislav Ruchkin, Karl Lundin Remnelius, Mohsen Moslem, Yannick Jacob, Anna Falk, Nicola Crosetto, Magda Bienko, Emanuela Santini, Anders Borgkvist, Sven Bölte, Kristiina Tammimies
Deficiency of the Heterogeneous Nuclear Ribonucleoprotein U locus leads to delayed hindbrain neurogenesis. Biology open 12 (10) (2023)
Chiara Pederiva, Davide M Trevisan, Dimitra Peirasmaki, Shan Chen, Sharon A Savage, Ola Larsson, Jernej Ule, Laura Baranello, Federico Agostini, Marianne Farnebo
Control of protein synthesis through mRNA pseudouridylation by dyskerin. Science advances 9 (30) (2023)
Roberto Ballarino, Britta A M Bouwman, Federico Agostini, Luuk Harbers, Constantin Diekmann, Erik Wernersson, Magda Bienko, Nicola Crosetto
An atlas of endogenous DNA double-strand breaks arising during human neural cell fate determination. Scientific data 9 (1) (2022)
Federico Agostini, Julian Zagalak, Jan Attig, Jernej Ule, Nicholas M Luscombe
Intergenic RNA mainly derives from nascent transcripts of known genes. Genome biology 22 (1) (2021)
Alessandro Bonetti, Federico Agostini, Ana Maria Suzuki, Kosuke Hashimoto, Giovanni Pascarella, Juliette Gimenez, Leonie Roos, Alex J Nash, Marco Ghilotti, Christopher J F Cameron, Matthew Valentine, Yulia A Medvedeva, Shuhei Noguchi, Eneritz Agirre, Kaori Kashi, null Samudyata, Joachim Luginbühl, Riccardo Cazzoli, Saumya Agrawal, Nicholas M Luscombe, Mathieu Blanchette, Takeya Kasukawa, Michiel de Hoon, Erik Arner, Boris Lenhard, Charles Plessy, Gonçalo Castelo-Branco, Valerio Orlando, Piero Carnici
Author Correction: RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions. Nature communications 12 (1) (2021)
Alessandro Bonetti, Federico Agostini, Ana Maria Suzuki, Kosuke Hashimoto, Giovanni Pascarella, Juliette Gimenez, Leonie Roos, Alex J Nash, Marco Ghilotti, Christopher J F Cameron, Matthew Valentine, Yulia A Medvedeva, Shuhei Noguchi, Eneritz Agirre, Kaori Kashi, null Samudyata, Joachim Luginbühl, Riccardo Cazzoli, Saumya Agrawal, Nicholas M Luscombe, Mathieu Blanchette, Takeya Kasukawa, Michiel de Hoon, Erik Arner, Boris Lenhard, Charles Plessy, Gonçalo Castelo-Branco, Valerio Orlando, Piero Carnici
RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions. Nature communications 11 (1) (2020)
Britta A M Bouwman, Federico Agostini, Silvano Garnerone, Giuseppe Petrosino, Henrike Johanna Gothe, Sergi Sayols, Andreas E Moor, Shalev Itzkovitz, Magda Bienko, Vassilis Roukos, Nicola Crosetto
Genome-wide detection of DNA double-strand breaks by in-suspension BLISS. Nature protocols 15 (12) (2020)
Gabriele Girelli, Joaquin Custodio, Tomasz Kallas, Federico Agostini, Erik Wernersson, Bastiaan Spanjaard, Ana Mota, Solrun Kolbeinsdottir, Eleni Gelali, Nicola Crosetto, Magda Bienko
GPSeq reveals the radial organization of chromatin in the cell nucleus. Nature biotechnology 38 (10) (2020)

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Publication Activity (10 Years)

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Federico Agostini