Jian Zhang (Feng Zhu)

Loop profile ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 91

Top Venues

Journal of chemical information and modeling

Nucleic acids research

Briefings in bioinformatics

Analytical chemistry

Zhejiang University

National University of Singapore (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Zhejiang University Jul 01 2017

China

Professor :: College of Pharmaceutical Sciences

Chongqing University Jul 01 2012 - Jun 30 2017

China

Professor :: School of Pharmaceutical Sciences

National University of Singapore May 01 2011 - Jun 30 2012

Singapore

Research Fellow :: Department of Pharmacy

Education History

National University of Singapore Aug 01 2006 - Apr 30 2011

Singapore

PHD :: Department of Pharmacy

Beijing Normal University Sep 01 2003 - Jul 31 2006

China

MSC :: Key Laboratory of Informatics

Beijing Normal University Sep 01 1999 - Aug 31 2003

China

BSC :: Department of Physics

Publications

Xue Zhang, JingCheng Wu, Yuanyuan Luo, Yilin Wang, Yujie Wu, Xiaobin Xu, Yufang Zhang, Ruiying Kong, Ying Chi, Yisheng Sun, Shuqing Chen, Qiaojun He, Jian Zhang, Zhan Zhou
CovEpiAb: a comprehensive database and analysis resource for immune epitopes and antibodies of human coronaviruses. Briefings in bioinformatics 25 (3) (2024)
Xiaona Wang, Yintao Zhang, Zengpeng Li, Zixin Duan, Menghan Guo, Zhen Wang, Jian Zhang, Wei Wei Xue
PROSCA: an online platform for humanized scaffold mining facilitating rational protein engineering. Nucleic acids research 52 (W1) (2024)
Jing Tang, Minjie Mou, Xin Zheng, Jin Yan, Ziqi Pan, Jinsong Zhang, Bo Li, Qingxia Yang, Yunxia Wang, Ying Zhang, Jian-Qing Gao, Song Li, Hui Yang, Jian Zhang
Strategy for Identifying a Robust Metabolomic Signature Reveals the Altered Lipid Metabolism in Pituitary Adenoma. Analytical chemistry 96 (12) (2024)
Xiaona Wang, Yintao Zhang, Zengpeng Li, Zixin Duan, Menghan Guo, Zhen Wang, Jian Zhang, Wei Wei Xue
PROSCA: an online platform for humanized scaffold mining facilitating rational protein engineering. Nucleic acids research 52 (W1) (2024)
Kenneth M Merz, Guo-Wei Wei, Jian Zhang
Editorial: Machine Learning in Bio-cheminformatics. Journal of chemical information and modeling 64 (7) (2024)
Xuedong Li, Chengzhao Wang, Xu Chai, Xingang Liu, Kening Qiao, Yan Fu, Yanzhao Jin, Qingzhong Jia, Jian Zhang, Yang Zhang
Discovery of Potent Selective HDAC6 Inhibitors with 5-Phenyl-1 H -indole Fragment: Virtual Screening, Rational Design, and Biological Evaluation. Journal of chemical information and modeling (2024)
Jing Tang, Minjie Mou, Xin Zheng, Jin Yan, Ziqi Pan, Jinsong Zhang, Bo Li, Qingxia Yang, Yunxia Wang, Ying Zhang, Jian-Qing Gao, Song Li, Hui Yang, Jian Zhang
Strategy for Identifying a Robust Metabolomic Signature Reveals the Altered Lipid Metabolism in Pituitary Adenoma. Analytical chemistry 96 (12) (2024)
Xuedong Li, Chengzhao Wang, Xu Chai, Xingang Liu, Kening Qiao, Yan Fu, Yanzhao Jin, Qingzhong Jia, Jian Zhang, Yang Zhang
Discovery of Potent Selective HDAC6 Inhibitors with 5-Phenyl-1 H -indole Fragment: Virtual Screening, Rational Design, and Biological Evaluation. Journal of chemical information and modeling 64 (15) (2024)
Hanyu Zhang, Yuan Zhou, Zhichao Zhang, Huaicheng Sun, Ziqi Pan, Minjie Mou, Wei Zhang, Qing Ye, Ting-Jun Hou, HongLin Li, Chang-Yu Hsieh, Jian Zhang
Large Language Model-Based Natural Language Encoding Could Be All You Need for Drug Biomedical Association Prediction. Analytical chemistry (2024)
Lingyan Zheng, Shuiyang Shi, Mingkun Lu, Pan Fang, Ziqi Pan, Hongning Zhang, Zhimeng Zhou, Hanyu Zhang, Minjie Mou, Shijie Huang, Lin Tao, Weiqi Xia, Honglin Li, Zhenyu Zeng, Shun Zhang, Yuzong Chen, Zhaorong Li, Jian Zhang
AnnoPRO: a strategy for protein function annotation based on multi-scale protein representation and a hybrid deep learning of dual-path encoding. Genome biology 25 (1) (2024)
Lingyan Zheng, Shuiyang Shi, Mingkun Lu, Pan Fang, Ziqi Pan, Hongning Zhang, Zhimeng Zhou, Hanyu Zhang, Minjie Mou, Shijie Huang, Lin Tao, Weiqi Xia, Honglin Li, Zhenyu Zeng, Shun Zhang, Yuzong Chen, Zhaorong Li, Jian Zhang
AnnoPRO: a strategy for protein function annotation based on multi-scale protein representation and a hybrid deep learning of dual-path encoding. Genome biology 25 (1) (2024)
Lingyan Zheng, Shuiyang Shi, Mingkun Lu, Pan Fang, Ziqi Pan, Hongning Zhang, Zhimeng Zhou, Hanyu Zhang, Minjie Mou, Shijie Huang, Lin Tao, Weiqi Xia, Honglin Li, Zhenyu Zeng, Shun Zhang, Yuzong Chen, Zhaorong Li, Jian Zhang
AnnoPRO: a strategy for protein function annotation based on multi-scale protein representation and a hybrid deep learning of dual-path encoding. Genome biology 25 (1) (2024)
Kenneth M Merz, Guo-Wei Wei, Jian Zhang
Editorial: Machine Learning in Bio-cheminformatics. Journal of chemical information and modeling 64 (7) (2024)
Jing Tang, Minjie Mou, Xin Zheng, Jin Yan, Ziqi Pan, Jinsong Zhang, Bo Li, Qingxia Yang, Yunxia Wang, Ying Zhang, Jian-Qing Gao, Song Li, Hui Yang, Jian Zhang
Strategy for Identifying a Robust Metabolomic Signature Reveals the Altered Lipid Metabolism in Pituitary Adenoma. Analytical chemistry (2024)
Xue Zhang, JingCheng Wu, Yuanyuan Luo, Yilin Wang, Yujie Wu, Xiaobin Xu, Yufang Zhang, Ruiying Kong, Ying Chi, Yisheng Sun, Shuqing Chen, Qiaojun He, Jian Zhang, Zhan Zhou
CovEpiAb: a comprehensive database and analysis resource for immune epitopes and antibodies of human coronaviruses. Briefings in bioinformatics 25 (3) (2024)
Wei Zhang, Minjie Mou, Wei Hu, Mingkun Lu, Hanyu Zhang, Hongning Zhang, Yongchao Luo, Hongquan Xu, Lin Tao, Haibin Dai, Jian-Qing Gao, Jian Zhang
MOINER: A Novel Multiomics Early Integration Framework for Biomedical Classification and Biomarker Discovery. Journal of chemical information and modeling 64 (7) (2024)
Kenneth M Merz, Guowei Wei, Jian Zhang
Editorial: Cutting-Edge Methodologies in Omics Data Analysis. Journal of chemical information and modeling 64 (13) (2024)
Qingxia Yang, Shuman Chen, Wenyu Jiang, Lan Mi, Jiarui Liu, Yu Hu, Xinglai Ji, Jun Wang, Jian Zhang
MultiClassMetabo : A Superior Classification Model Constructed Using Metabolic Markers in Multiclass Metabolomics. Analytical chemistry 96 (4) (2024)
Lingyan Zheng, Shuiyang Shi, Mingkun Lu, Pan Fang, Ziqi Pan, Hongning Zhang, Zhimeng Zhou, Hanyu Zhang, Minjie Mou, Shijie Huang, Lin Tao, Weiqi Xia, Honglin Li, Zhenyu Zeng, Shun Zhang, Yuzong Chen, Zhaorong Li, Jian Zhang
AnnoPRO: a strategy for protein function annotation based on multi-scale protein representation and a hybrid deep learning of dual-path encoding. Genome biology 25 (1) (2024)
Fengcheng Li, Minjie Mou, Xiaoyi Li, Weize Xu, Jiayi Yin, Yang Zhang, Jian Zhang
DrugMAP 2.0: molecular atlas and pharma-information of all drugs. Nucleic acids research (2024)
Xiaona Wang, Yintao Zhang, Zengpeng Li, Zixin Duan, Menghan Guo, Zhen Wang, Jian Zhang, Wei Wei Xue
PROSCA: an online platform for humanized scaffold mining facilitating rational protein engineering. Nucleic acids research (2024)
Qingxia Yang, Shuman Chen, Wenyu Jiang, Lan Mi, Jiarui Liu, Yu Hu, Xinglai Ji, Jun Wang, Jian Zhang
MultiClassMetabo : A Superior Classification Model Constructed Using Metabolic Markers in Multiclass Metabolomics. Analytical chemistry (2024)
Wei Zhang, Minjie Mou, Wei Hu, Mingkun Lu, Hanyu Zhang, Hongning Zhang, Yongchao Luo, Hongquan Xu, Lin Tao, Haibin Dai, Jian-Qing Gao, Jian Zhang
MOINER: A Novel Multiomics Early Integration Framework for Biomedical Classification and Biomarker Discovery. Journal of chemical information and modeling (2024)
Lingyan Zheng, Shuiyang Shi, Xiuna Sun, Mingkun Lu, Yang Liao, Sisi Zhu, Hongning Zhang, Ziqi Pan, Pan Fang, Zhenyu Zeng, Honglin Li, Zhaorong Li, Wei Wei Xue, Jian Zhang
MoDAFold: a strategy for predicting the structure of missense mutant protein based on AlphaFold2 and molecular dynamics. Briefings in bioinformatics 25 (2) (2024)
Jing Tang, Minjie Mou, Xin Zheng, Jin Yan, Ziqi Pan, Jinsong Zhang, Bo Li, Qingxia Yang, Yunxia Wang, Ying Zhang, Jian-Qing Gao, Song Li, Hui Yang, Jian Zhang
Strategy for Identifying a Robust Metabolomic Signature Reveals the Altered Lipid Metabolism in Pituitary Adenoma. Analytical chemistry 96 (12) (2024)
Qingxia Yang, Shuman Chen, Wenyu Jiang, Lan Mi, Jiarui Liu, Yu Hu, Xinglai Ji, Jun Wang, Jian Zhang
MultiClassMetabo : A Superior Classification Model Constructed Using Metabolic Markers in Multiclass Metabolomics. Analytical chemistry 96 (4) (2024)
Wei Zhang, Minjie Mou, Wei Hu, Mingkun Lu, Hanyu Zhang, Hongning Zhang, Yongchao Luo, Hongquan Xu, Lin Tao, Haibin Dai, Jian-Qing Gao, Jian Zhang
MOINER: A Novel Multiomics Early Integration Framework for Biomedical Classification and Biomarker Discovery. Journal of chemical information and modeling 64 (7) (2024)
Xuedong Li, Chengzhao Wang, Xu Chai, Xingang Liu, Kening Qiao, Yan Fu, Yanzhao Jin, Qingzhong Jia, Jian Zhang, Yang Zhang
Discovery of Potent Selective HDAC6 Inhibitors with 5-Phenyl-1 H -indole Fragment: Virtual Screening, Rational Design, and Biological Evaluation. Journal of chemical information and modeling 64 (15) (2024)
Xue Zhang, JingCheng Wu, Yuanyuan Luo, Yilin Wang, Yujie Wu, Xiaobin Xu, Yufang Zhang, Ruiying Kong, Ying Chi, Yisheng Sun, Shuqing Chen, Qiaojun He, Jian Zhang, Zhan Zhou
CovEpiAb: a comprehensive database and analysis resource for immune epitopes and antibodies of human coronaviruses. Briefings in bioinformatics 25 (3) (2024)
Kenneth M Merz, Yee Siew Choong, Zoe Cournia, Olexandr Isayev, Thereza A Soares, Guo-Wei Wei, Jian Zhang
Editorial: Machine Learning in Materials Science. Journal of chemical information and modeling 64 (10) (2024)
Qingxia Yang, Shuman Chen, Wenyu Jiang, Lan Mi, Jiarui Liu, Yu Hu, Xinglai Ji, Jun Wang, Jian Zhang
MultiClassMetabo : A Superior Classification Model Constructed Using Metabolic Markers in Multiclass Metabolomics. Analytical chemistry 96 (4) (2024)
Wei Zhang, Minjie Mou, Wei Hu, Mingkun Lu, Hanyu Zhang, Hongning Zhang, Yongchao Luo, Hongquan Xu, Lin Tao, Haibin Dai, Jian-Qing Gao, Jian Zhang
MOINER: A Novel Multiomics Early Integration Framework for Biomedical Classification and Biomarker Discovery. Journal of chemical information and modeling 64 (7) (2024)
Kenneth M Merz, Guo-Wei Wei, Jian Zhang
Editorial: Machine Learning in Bio-cheminformatics. Journal of chemical information and modeling 63 (1) (2023)
Yang Zhang, Xingang Liu, Fengcheng Li, Jiayi Yin, Hao Yang, Xuedong Li, Xinyu Liu, Xu Chai, Tianle Niu, Su Zeng, Qingzhong Jia, Jian Zhang
INTEDE 2.0: the metabolic roadmap of drugs. Nucleic acids research (2023)
Jiayi Yin, Zhen Chen, Nanxin You, Fengcheng Li, Hanyu Zhang, Jia Xue, Hui Ma, Qingwei Zhao, Lushan Yu, Su Zeng, Jian Zhang
VARIDT 3.0: the phenotypic and regulatory variability of drug transporter. Nucleic acids research (2023)
Liteng Shen, Xiuna Sun, Zhen Chen, Yu Guo, Zheyuan Shen, Yi Song, Wenxiu Xin, Haiying Ding, Xinyue Ma, Weiben Xu, Wanying Zhou, Jinxin Che, Lili Tan, Liangsheng Chen, Siqi Chen, Xiao-Wu Dong, Luo Fang, Jian Zhang
ADCdb: the database of antibody-drug conjugates. Nucleic acids research (2023)
Hongquan Xu, Wei Zhang, Ying Zhou, Zixuan Yue, Tianci Yan, Yuanyuan Zhang, Yuhong Liu, Yanfeng Hong, Shuiping Liu, Jian Zhang, Lin Tao
Systematic Description of the Content Variation of Natural Products (NPs): To Prompt the Yield of High-Value NPs and the Discovery of New Therapeutics. Journal of chemical information and modeling 63 (5) (2023)
Mingyu Li, Xiaobin Lan, Xun Lu, Jian Zhang
A Structure-Based Allosteric Modulator Design Paradigm. Health data science 3 (2023)
Hongquan Xu, Wei Zhang, Ying Zhou, Zixuan Yue, Tianci Yan, Yuanyuan Zhang, Yuhong Liu, Yanfeng Hong, Shuiping Liu, Jian Zhang, Lin Tao
Systematic Description of the Content Variation of Natural Products (NPs): To Prompt the Yield of High-Value NPs and the Discovery of New Therapeutics. Journal of chemical information and modeling (2023)
Yunxia Wang, Ziqi Pan, Minjie Mou, Weiqi Xia, Hongning Zhang, Hanyu Zhang, Jin Liu, Lingyan Zheng, Yongchao Luo, Hanqi Zheng, Xinyuan Yu, Xichen Lian, Zhenyu Zeng, Zhaorong Li, Bing Zhang, Mingyue Zheng, Honglin Li, Tingjun Hou, Jian Zhang
A task-specific encoding algorithm for RNAs and RNA-associated interactions based on convolutional autoencoder. Nucleic acids research (2023)
Tingting Fu, Su Zeng, Qingchuan Zheng, Jian Zhang
The Important Role of Transporter Structures in Drug Disposition, Efficacy, and Toxicity . Drug metabolism and disposition: the biological fate of chemicals (2023)
Ying Zhang, Huaicheng Sun, Xichen Lian, Jing Tang, Jian Zhang
ANPELA: Significantly Enhanced Quantification Tool for Cytometry-Based Single-Cell Proteomics. Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2023)
Hongquan Xu, Wei Zhang, Ying Zhou, Zixuan Yue, Tianci Yan, Yuanyuan Zhang, Yuhong Liu, Yanfeng Hong, Shuiping Liu, Jian Zhang, Lin Tao
Systematic Description of the Content Variation of Natural Products (NPs): To Prompt the Yield of High-Value NPs and the Discovery of New Therapeutics. Journal of chemical information and modeling 63 (5) (2023)
Kenneth M Merz, Guo-Wei Wei, Jian Zhang
Editorial: Harnessing the Power of Large Language Model-Based Chatbots for Scientific Discovery. Journal of chemical information and modeling 63 (17) (2023)
Yongchao Luo, Panpan Wang, Minjie Mou, Hanqi Zheng, Jiajun Hong, Lin Tao, Jian Zhang
A novel strategy for designing the magic shotguns for distantly related target pairs. Briefings in bioinformatics 24 (1) (2023)
Qingxia Yang, Yaguo Gong, Jian Zhang
Critical Assessment of the Biomarker Discovery and Classification Methods for Multiclass Metabolomics. Analytical chemistry (2023)
Wei Hu, Wei Zhang, Ying Zhou, Yongchao Luo, Xiuna Sun, Huimin Xu, Shuiyang Shi, Teng Li, Yichao Xu, Qianqian Yang, Yunqing Qiu, Jian Zhang, Haibin Dai
MecDDI: Clarified Drug-Drug Interaction Mechanism Facilitating Rational Drug Use and Potential Drug-Drug Interaction Prediction. Journal of chemical information and modeling (2023)
Ying Zhou, Yintao Zhang, Donghai Zhao, Xinyuan Yu, Xinyi Shen, Yuan Zhou, Shanshan Wang, Yunqing Qiu, Yu Zong Chen, Jian Zhang
TTD: Therapeutic Target Database describing target druggability information. Nucleic acids research (2023)
Wei Hu, Wei Zhang, Ying Zhou, Yongchao Luo, Xiuna Sun, Huimin Xu, Shuiyang Shi, Teng Li, Yichao Xu, Qianqian Yang, Yunqing Qiu, Jian Zhang, Haibin Dai
MecDDI: Clarified Drug-Drug Interaction Mechanism Facilitating Rational Drug Use and Potential Drug-Drug Interaction Prediction. Journal of chemical information and modeling 63 (5) (2023)
Mingyu Li, Xiaobin Lan, Xun Lu, Jian Zhang
A Structure-Based Allosteric Modulator Design Paradigm. Health data science 3 (2023)
Yunxia Wang, Zhen Chen, Ziqi Pan, Shijie Huang, Jin Liu, Weiqi Xia, Hongning Zhang, Mingyue Zheng, Honglin Li, Tingjun Hou, Jian Zhang
RNAincoder: a deep learning-based encoder for RNA and RNA-associated interaction. Nucleic acids research (2023)
Yongchao Luo, Panpan Wang, Minjie Mou, Hanqi Zheng, Jiajun Hong, Lin Tao, Jian Zhang
A novel strategy for designing the magic shotguns for distantly related target pairs. Briefings in bioinformatics (2023)
Yongchao Luo, Panpan Wang, Minjie Mou, Hanqi Zheng, Jiajun Hong, Lin Tao, Jian Zhang
A novel strategy for designing the magic shotguns for distantly related target pairs. Briefings in bioinformatics 24 (1) (2023)
Wei Hu, Wei Zhang, Ying Zhou, Yongchao Luo, Xiuna Sun, Huimin Xu, Shuiyang Shi, Teng Li, Yichao Xu, Qianqian Yang, Yunqing Qiu, Jian Zhang, Haibin Dai
MecDDI: Clarified Drug-Drug Interaction Mechanism Facilitating Rational Drug Use and Potential Drug-Drug Interaction Prediction. Journal of chemical information and modeling 63 (5) (2023)
Shengzhe Deng, Haiwei Zhang, Rongpei Gou, Ding Luo, Zerong Liu, Jian Zhang, Wei Wei Xue
Structure-Based Discovery of a Novel Allosteric Inhibitor against Human Dopamine Transporter. Journal of chemical information and modeling (2023)
Minjie Mou, Ziqi Pan, Zhimeng Zhou, Lingyan Zheng, Hanyu Zhang, Shuiyang Shi, Fengcheng Li, Xiuna Sun, Jian Zhang
A Transformer-Based Ensemble Framework for the Prediction of Protein-Protein Interaction Sites. Research (Washington, D.C.) 6 (2023)
Kenneth M Merz, Guo-Wei Wei, Jian Zhang
Editorial: Machine Learning in Bio-cheminformatics. Journal of chemical information and modeling 63 (1) (2023)
Chenyang Zhang, Minjie Mou, Ying Zhou, Wei Zhang, Xichen Lian, Shuiyang Shi, Mingkun Lu, Huaicheng Sun, Fengcheng Li, Yunxia Wang, Zhenyu Zeng, Zhaorong Li, Bing Zhang, Yunqing Qiu, Jian Zhang, Jian-Qing Gao
Biological activities of drug inactive ingredients. Briefings in bioinformatics 23 (5) (2022)
Guo-Wei Wei, Thereza A Soares, Habibah Abdul Wahab, Jian Zhang
Computational Chemistry in Asia. Journal of chemical information and modeling 62 (21) (2022)
Wei Wei Xue, Tingting Fu, Shengzhe Deng, Fengyuan Yang, Jingyi Yang, Jian Zhang
Molecular Mechanism for the Allosteric Inhibition of the Human Serotonin Transporter by Antidepressant Escitalopram. ACS chemical neuroscience 13 (3) (2022)
Minjie Mou, Ziqi Pan, Mingkun Lu, Huaicheng Sun, Yunxia Wang, Yongchao Luo, Jian Zhang
Application of Machine Learning in Spatial Proteomics. Journal of chemical information and modeling (2022)
Guo-Wei Wei, Jian Zhang, Kenneth M Merz
Editorial on Machine Learning. Journal of chemical information and modeling 62 (17) (2022)
Qingxia Yang, Bo Li, Panpan Wang, Jicheng Xie, Yuhao Feng, Ziqiang Liu, Jian Zhang
LargeMetabo: an out-of-the-box tool for processing and analyzing large-scale metabolomic data. Briefings in bioinformatics 23 (6) (2022)
Fengcheng Li, Jiayi Yin, Mingkun Lu, Minjie Mou, Zhaorong Li, Zhenyu Zeng, Ying Tan, Shanshan Wang, Xinyi Chu, Haibin Dai, Tingjun Hou, Su Zeng, Yu Zong Chen, Jian Zhang
DrugMAP: molecular atlas and pharma-information of all drugs. Nucleic acids research (2022)
Hanyu Zhang, Yunxia Wang, Ziqi Pan, Xiuna Sun, Minjie Mou, Bing Zhang, Zhaorong Li, Honglin Li, Jian Zhang
ncRNAInter: a novel strategy based on graph neural network to discover interactions between lncRNA and miRNA. Briefings in bioinformatics 23 (6) (2022)
Kuerbannisha Amahong, Wei Zhang, Ying Zhou, Song Zhang, Jiayi Yin, Fengcheng Li, Hongquan Xu, Tianci Yan, Zixuan Yue, Yuhong Liu, Tingjun Hou, Yunqing Qiu, Lin Tao, Leo Lianyi Han, Jian Zhang
CovInter: interaction data between coronavirus RNAs and host proteins. Nucleic acids research (2022)
Xiuna Sun, Yintao Zhang, Hanyang Li, Ying Zhou, Shuiyang Shi, Zhen Chen, Xin He, Hanyu Zhang, Fengcheng Li, Jiayi Yin, Minjie Mou, Yunzhu Wang, Yunqing Qiu, Jian Zhang
DRESIS: the first comprehensive landscape of drug resistance information. Nucleic acids research (2022)
Shuiping Liu, Lu Chen, Yintao Zhang, Ying Zhou, Ying He, Zhen Chen, Shasha Qi, Jinyu Zhu, Xudong Chen, Hao Zhang, Yongchao Luo, Yunqing Qiu, Lin Tao, Jian Zhang
M6AREG: m6A-centered regulation of disease development and drug response. Nucleic acids research (2022)
Fengcheng Li, Jiayi Yin, Mingkun Lu, Qingxia Yang, Zhenyu Zeng, Bing Zhang, Zhaorong Li, Yunqing Qiu, Haibin Dai, Yuzong Chen, Jian Zhang
ConSIG: consistent discovery of molecular signature from OMIC data. Briefings in bioinformatics 23 (4) (2022)
Xiaona Wang, Fengcheng Li, Wenqi Qiu, Binbin Xu, Yanlin Li, Xichen Lian, Hongyan Yu, Zhao Zhang, Jianxin Wang, Zhaorong Li, Wei Wei Xue, Jian Zhang
SYNBIP: synthetic binding proteins for research, diagnosis and therapy. Nucleic acids research (2021)
Jianbo Fu, Ying Zhang, Yunxia Wang, Hongning Zhang, Jin Liu, Jing Tang, Qingxia Yang, Huaicheng Sun, Wenqi Qiu, Yinghui Ma, Zhaorong Li, Mingyue Zheng, Jian Zhang
Optimization of metabolomic data processing using NOREVA. Nature protocols 17 (1) (2021)
Song Zhang, Jian Zhang
Comment on: "MicroRNA Mimics or Inhibitors as Antiviral Therapeutic Approaches Against COVID-19". Drugs 81 (14) (2021)
Song Zhang, Kuerbannisha Amahong, Chenyang Zhang, Fengcheng Li, Jianqing Gao, Yunqing Qiu, Jian Zhang
RNA-RNA interactions between SARS-CoV-2 and host benefit viral development and evolution during COVID-19 infection. Briefings in bioinformatics (2021)
Tingting Fu, Fengcheng Li, Yang Zhang, Jiayi Yin, Wenqi Qiu, Xuedong Li, Xingang Liu, Wenwen Xin, Chengzhao Wang, Lushan Yu, Jianqing Gao, Qingchuan Zheng, Su Zeng, Jian Zhang
VARIDT 2.0: structural variability of drug transporter. Nucleic acids research (2021)
Gao Tu, Tingting Fu, Fengyuan Yang, Jingyi Yang, Zhao Zhang, Xiao-Jun Yao, Wei Wei Xue, Jian Zhang
Understanding the Polypharmacological Profiles of Triple Reuptake Inhibitors by Molecular Simulation. ACS chemical neuroscience 12 (11) (2021)
Ying Zhou, Yintao Zhang, Xichen Lian, Fengcheng Li, Chaoxin Wang, Jian Zhang, Yunqing Qiu, Yu Zong Chen
Therapeutic target database update 2022: facilitating drug discovery with enriched comparative data of targeted agents. Nucleic acids research (2021)
Xueni Sun, Yintao Zhang, Ying Zhou, Xichen Lian, Lili Yan, Ting Pan, Ting Jin, Han Xie, Zimao Liang, Wenqi Qiu, Jianxin Wang, Zhaorong Li, Jian Zhang, Xinbing Sui
NPCDR: natural product-based drug combination and its disease-specific molecular regulation. Nucleic acids research (2021)
Jingyi Yang, Zhao Zhang, Fengyuan Yang, Haiwei Zhang, Haibo Wu, Jian Zhang, Wei Wei Xue
Computational design and modeling of nanobodies toward SARS-CoV-2 receptor binding domain. Chemical biology & drug design 98 (1) (2021)
Yunxia Wang, Fengcheng Li, Ying Zhang, Ying Zhou, Ying Tan, Yuzong Chen, Jian Zhang
Databases for the targeted COVID-19 therapeutics. British journal of pharmacology 177 (21) (2020)
Ercheng Wang, Gaoqi Weng, Huiyong Sun, Hongyan Du, Jian Zhang, Fu Chen, Zhe Wang, Ting-Jun Hou
Assessing the performance of the MM/PBSA and MM/GBSA methods. 10. Impacts of enhanced sampling and variable dielectric model on protein-protein Interactions. Physical chemistry chemical physics : PCCP 21 (35) (2019)
Yang Zhang, Jun Biao Ying, Jia Jun Hong, Feng Cheng Li, Ting Ting Fu, Feng Yuan Yang, Guo Xun Zheng, Xiao Jun Yao, Yan Lou, Yunqing Qiu, Wei Wei Xue, Jian Zhang
How Does Chirality Determine the Selective Inhibition of Histone Deacetylase 6? A Lesson from Trichostatin A Enantiomers Based on Molecular Dynamics. ACS chemical neuroscience 10 (5) (2019)
Qingxia Yang, Yunxia Wang, Song Zhang, Jing Tang, Fengcheng Li, Jiayi Yin, Yi Li, Jianbo Fu, Bo Li, Yongchao Luo, Wei Wei Xue, Jian Zhang
Biomarker Discovery for Immunotherapy of Pituitary Adenomas: Enhanced Robustness and Prediction Ability by Modern Computational Tools. International journal of molecular sciences 20 (1) (2019)
Qing-Xia Yang, Yun-Xia Wang, Feng-Cheng Li, Song Zhang, Yong-Chao Luo, Yi Li, Jing Tang, Bo Li, Yu-Zong Chen, Wei-Wei Xue, Jian Zhang
Identification of the gene signature reflecting schizophrenia's etiology by constructing artificial intelligence-based method of enhanced reproducibility. CNS neuroscience & therapeutics 25 (9) (2019)
Peichen Pan, Jiean Chen, Xijian Li, Miyang Li, Huidong Yu, Jean J Zhao, Jing Ni, Xuwen Wang, Huiyong Sun, Sheng Tian, Jian Zhang, Feng Liu, Yong Huang, Ting-Jun Hou
Structure-Based Drug Design and Identification of H2O-Soluble and Low Toxic Hexacyclic Camptothecin Derivatives with Improved Efficacy in Cancer and Lethal Inflammation Models in Vivo. Journal of medicinal chemistry 61 (19) (2018)
Gao Tu, Tingting Fu, Fengyuan Yang, Lixia Yao, Wei Wei Xue, Jian Zhang
Prediction of GluN2B-CT1290-1310/DAPK1 Interaction by Protein⁻Peptide Docking and Molecular Dynamics Simulation. Molecules (Basel, Switzerland) 23 (11) (2018)
Wei Wei Xue, Fengyuan Yang, Panpan Wang, Guoxun Zheng, Yuzong Chen, Xiao-Jun Yao, Jian Zhang
What Contributes to Serotonin-Norepinephrine Reuptake Inhibitors' Dual-Targeting Mechanism? The Key Role of Transmembrane Domain 6 in Human Serotonin and Norepinephrine Transporters Revealed by Molecular Dynamics Simulation. ACS chemical neuroscience 9 (5) (2018)
Jun Shang, Ben Hu, Junmei Wang, Jian Zhang, Yu Kang, Dan Li, Huiyong Sun, De-Xin Kong, Ting-Jun Hou
Cheminformatic Insight into the Differences between Terrestrial and Marine Originated Natural Products. Journal of chemical information and modeling 58 (6) (2018)
Tingting Fu, Guoxun Zheng, Gao Tu, Fengyuan Yang, Yu Zong Chen, Xiao-Jun Yao, Xiaofeng Li, Wei Wei Xue, Jian Zhang
Exploring the Binding Mechanism of Metabotropic Glutamate Receptor 5 Negative Allosteric Modulators in Clinical Trials by Molecular Dynamics Simulations. ACS chemical neuroscience 9 (6) (2018)
Haiyi Chen, Weitao Fu, Zhe Wang, Xuwen Wang, Tailong Lei, Jian Zhang, Dan Li, Shan Chang, Lei Xu, Ting-Jun Hou
Reliability of Docking-Based Virtual Screening for GPCR Ligands with Homology Modeled Structures: A Case Study of the Angiotensin II Type I Receptor. ACS chemical neuroscience 10 (1) (2018)
Zhi-Jie Han, Wei-Wei Xue, Lin Tao, Jian Zhang
Identification of novel immune-relevant drug target genes for Alzheimer's Disease by combining ontology inference with network analysis. CNS neuroscience & therapeutics 24 (12) (2018)
Panpan Wang, Xiaoyu Zhang, Tingting Fu, Shuang Li, Bo Li, Wei Wei Xue, Xiaojun Yao, Yuzong Chen, Jian Zhang
Differentiating Physicochemical Properties between Addictive and Nonaddictive ADHD Drugs Revealed by Molecular Dynamics Simulation Studies. ACS chemical neuroscience 8 (6) (2017)

Jian Zhang.css-eqlu8i{font-size:small;padding-left:4px;} (Feng Zhu)

Publication Activity (10 Years)

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Jian Zhang (Feng Zhu)