Giovanni Ciriello

ORCID

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 14

Top Venues

University of Lausanne

University of Padova (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Lausanne Apr 01 2015

Switzerland

Assistant Professor :: Computational Biology

Memorial Sloan Kettering Cancer Center Feb 01 2010 - Mar 31 2015

United States

Post-doctoral scholar :: Computational Biology

Education History

University of Padova Jan 01 2006 - Mar 12 2009

Italy

PHD :: Electrical and Computer Engineering

Publications

Ruben Bill, Pratyaksha Wirapati, Marius Messemaker, Whijae Roh, Beatrice Zitti, Florent Duval, Máté Kiss, Jong Chul Park, Talia M Saal, Jan Hoelzl, David Tarussio, Fabrizio Benedetti, Stéphanie R Tissot, Lana Elias Kandalaft, Marco Varrone, Giovanni Ciriello, Thomas A McKee, Yan Monnier, Maxime Mermod, Emily M Blaum, Irena Gushterova, Anna L K Gonye, Nir Hacohen, Gad A Getz, Thorsten R Mempel, Allon M Klein, Ralph Weissleder, William C Faquin Md PhD, Peter M Sadow, Derrick Lin, Sara I Pai, Moshe Sade-Feldman, Mikaël J Pittet
CXCL9:SPP1 macrophage polarity identifies a network of cellular programs that control human cancers. Science (New York, N.Y.) 381 (6657) (2023)
Giovanni Ciriello, Luca Magnani, Sarah J Aitken, Leila Akkari, Sam Behjati, Douglas Hanahan, Dan A Landau, Núria López-Bigas, Darío G Lupiáñez, Jean-Christophe Marine, Ana Martin-Villalba, Gioacchino Natoli, Anna C Obenauf, Elisa Oricchio, Paola Scaffidi, Andrea Sottoriva, Alexander Swarbrick, Giovanni Tonon, Sakari Vanharanta, Johannes Zuber
Cancer Evolution: A Multifaceted Affair. Cancer discovery (2023)
Ruxandra A Lambuta, Luca Nanni, Yuanlong Liu, Juan Diaz-Miyar, Arvind Iyer, Daniele Tavernari, Natalya Katanayeva, Giovanni Ciriello, Elisa Oricchio
Whole-genome doubling drives oncogenic loss of chromatin segregation. Nature (2023)
Marco Varrone, Daniele Tavernari, Albert Santamaria-Martinez, Logan A Walsh, Giovanni Ciriello
CellCharter reveals spatial cell niches associated with tissue remodeling and cell plasticity. Nature genetics (2023)
Mateusz Antoszewski, Nadine Zangger, Gustavo A Ruiz Buendía, Joao Lourenco, Yuanlong Liu, Tara Sugrue, Christelle Dubey, Marianne Nkosi, Colin E J Pritchard, Ivo Johan Huijbers, Gabriela C Segat, Sandra Alonso-Moreno, Elisabeth Serracanta, Laura Belver, Adolfo A Ferrando, Giovanni Ciriello, Andrew P Weng, Ute Koch, Freddy Radtke
Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology in T-ALL. Blood 139 (16) (2022)
Giovanni Ciriello
One size does not fit all for mutational signatures. Nature cancer 1 (2) (2022)
Stephanie Sungalee, Yuanlong Liu, Ruxandra A Lambuta, Natalya Katanayeva, Maria Donaldson Collier, Daniele Tavernari, Sandrine Roulland, Giovanni Ciriello, Elisa Oricchio
Histone acetylation dynamics modulates chromatin conformation and allele-specific interactions at oncogenic loci. Nature genetics 53 (5) (2021)
Marie Zufferey, Yuanlong Liu, Daniele Tavernari, Marco Mina, Giovanni Ciriello
Systematic assessment of gene co-regulation within chromatin domains determines differentially active domains across human cancers. Genome biology 22 (1) (2021)
Yuanlong Liu, Luca Nanni, Stephanie Sungalee, Marie Zufferey, Daniele Tavernari, Marco Mina, Stefano Ceri, Elisa Oricchio, Giovanni Ciriello
Systematic inference and comparison of multi-scale chromatin sub-compartments connects spatial organization to cell phenotypes. Nature communications 12 (1) (2021)
Marco Mina, Arvind Iyer, Daniele Tavernari, Franck Raynaud, Giovanni Ciriello
Discovering functional evolutionary dependencies in human cancers. Nature genetics 52 (11) (2020)
Wan-Chen Cheng, Yao-Chen Tsui, Simone Ragusa, Viktor Hendrik Koelzer, Marco Mina, Fabien Franco, Heinz Läubli, Benjamin Tschumi, Daniel Speiser, Pedro Romero, Alfred Zippelius, Tatiana V Petrova, Kirsten Mertz, Giovanni Ciriello, Ping-Chih Ho
Uncoupling protein 2 reprograms the tumor microenvironment to support the anti-tumor immune cycle. Nature immunology 20 (2) (2019)
Maria C Donaldson-Collier, Stephanie Sungalee, Marie Zufferey, Daniele Tavernari, Natalya Katanayeva, Elena Battistello, Marco Mina, Kyle M Douglass, Timo Rey, Franck Raynaud, Suliana Manley, Giovanni Ciriello, Elisa Oricchio
EZH2 oncogenic mutations drive epigenetic, transcriptional, and structural changes within chromatin domains. Nature genetics 51 (3) (2019)
Marie Zufferey, Daniele Tavernari, Elisa Oricchio, Giovanni Ciriello
Comparison of computational methods for the identification of topologically associating domains. Genome biology 19 (1) (2018)
Franck Raynaud, Marco Mina, Daniele Tavernari, Giovanni Ciriello
Pan-cancer inference of intra-tumor heterogeneity reveals associations with different forms of genomic instability. PLoS genetics 14 (9) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Giovanni Ciriello