Hector Martinez-Seara (H Martinez-Seara)

Scopus Author ID ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 41

Top Venues

The journal of physical chemistry letters

Physical chemistry chemical physics : PCCP

The journal of physical chemistry. B

PLoS computational biology

Institute of Organic Chemistry and Biochemistry CAS, v.v.i.

Universitat de Barcelona (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Institute of Organic Chemistry and Biochemistry CAS, v.v.i. Sep 01 2015

Czechia

Research scientist

Tampereen Teknillinen yliopisto Sep 01 2012 - Apr 30 2017

Finland

Academy Postdoctoral Researcher :: Physics

Tampereen Teknillinen yliopisto Jun 01 2010 - Aug 31 2012

Finland

Postdoctoral Researcher :: Physics

Tampereen Teknillinen yliopisto Feb 16 2010 - May 31 2010

Finland

Senior research scientist :: Physics

Universitat de Barcelona May 01 2004 - Jul 01 2009

Spain

PhD student :: Physical Chemistry

Education History

Universitat de Barcelona

Spain

PHD :: Physical chemistry

Universitat de Barcelona

Spain

MSC :: Physical chemistry

Publications

Federica Scollo, Carmelo Tempra, Hüseyin Evci, Miguel Riopedre-Fernandez, Agnieszka Olżyńska, Matti Javanainen, Arunima Uday, Marek Cebecauer, Lukasz Cwiklik, Hector Martinez-Seara, Pavel Jungwirth, Piotr Jurkiewicz, Martin Hof
Can calmodulin bind to lipids of the cytosolic leaflet of plasma membranes? Open biology 14 (9) (2024)
Philip E Mason, Tomas Martinek, Balázs Fábián, Mario Vazdar, Pavel Jungwirth, Ondrej Tichacek, Elise Duboué-Dijon, Hector Martinez-Seara
Hydration of biologically relevant tetramethylammonium cation by neutron scattering and molecular dynamics. Physical chemistry chemical physics : PCCP (2024)
Philip E Mason, Tomas Martinek, Balázs Fábián, Mario Vazdar, Pavel Jungwirth, Ondrej Tichacek, Elise Duboué-Dijon, Hector Martinez-Seara
Hydration of biologically relevant tetramethylammonium cation by neutron scattering and molecular dynamics. Physical chemistry chemical physics : PCCP 26 (4) (2024)
Victor Cruces Chamorro, Pavel Jungwirth, Hector Martinez-Seara
Building Water Models Compatible with Charge Scaling Molecular Dynamics. The journal of physical chemistry letters 15 (10) (2024)
Victor Cruces Chamorro, Pavel Jungwirth, Hector Martinez-Seara
Building Water Models Compatible with Charge Scaling Molecular Dynamics. The journal of physical chemistry letters 15 (10) (2024)
Ricky Nencini, Carmelo Tempra, Denys Biriukov, Miguel Riopedre-Fernandez, Victor Cruces Chamorro, Jakub Polák, Philip E Mason, Daniel Ondo, Jan Heyda, O H Samuli Ollila, Pavel Jungwirth, Matti Javanainen, Hector Martinez-Seara
Effective Inclusion of Electronic Polarization Improves the Description of Electrostatic Interactions: The prosECCo75 Biomolecular Force Field. Journal of chemical theory and computation (2024)
Miguel Riopedre-Fernandez, Vojtech Kostal, Tomas Martinek, Hector Martinez-Seara, Denys Biriukov
Developing and Benchmarking Sulfate and Sulfamate Force Field Parameters via Ab Initio Molecular Dynamics Simulations To Accurately Model Glycosaminoglycan Electrostatic Interactions. Journal of chemical information and modeling (2024)
David Just, Vladimír Palivec, Kateřina Bártová, Lucie Bednárová, Markéta Pazderková, Ivana Císařová, Hector Martinez-Seara, Ullrich Jahn
Foldamers controlled by functional triamino acids: structural investigation of α/γ-hybrid oligopeptides. Communications chemistry 7 (1) (2024)
Philip E Mason, Tomas Martinek, Balázs Fábián, Mario Vazdar, Pavel Jungwirth, Ondrej Tichacek, Elise Duboué-Dijon, Hector Martinez-Seara
Hydration of biologically relevant tetramethylammonium cation by neutron scattering and molecular dynamics. Physical chemistry chemical physics : PCCP 26 (4) (2024)
David Just, Vladimír Palivec, Kateřina Bártová, Lucie Bednárová, Markéta Pazderková, Ivana Císařová, Hector Martinez-Seara, Ullrich Jahn
Foldamers controlled by functional triamino acids: structural investigation of α/γ-hybrid oligopeptides. Communications chemistry 7 (1) (2024)
Victor Cruces Chamorro, Pavel Jungwirth, Hector Martinez-Seara
Building Water Models Compatible with Charge Scaling Molecular Dynamics. The journal of physical chemistry letters 15 (10) (2024)
Victor Cruces Chamorro, Pavel Jungwirth, Hector Martinez-Seara
Building Water Models Compatible with Charge Scaling Molecular Dynamics. The journal of physical chemistry letters (2024)
Philip E Mason, Tomas Martinek, Balázs Fábián, Mario Vazdar, Pavel Jungwirth, Ondrej Tichacek, Elise Duboué-Dijon, Hector Martinez-Seara
Hydration of biologically relevant tetramethylammonium cation by neutron scattering and molecular dynamics. Physical chemistry chemical physics : PCCP 26 (4) (2024)
Vojtech Kostal, Philip E Mason, Hector Martinez-Seara, Pavel Jungwirth
Common Cations Are Not Polarizable: Effects of Dispersion Correction on Hydration Structures from Ab Initio Molecular Dynamics. The journal of physical chemistry letters (2023)
Semen O Yesylevsky, Hector Martinez-Seara, Pavel Jungwirth
Curvature Matters: Modeling Calcium Binding to Neutral and Anionic Phospholipid Bilayers. The journal of physical chemistry. B (2023)
Vojtech Kostal, Philip E Mason, Hector Martinez-Seara, Pavel Jungwirth
Common Cations Are Not Polarizable: Effects of Dispersion Correction on Hydration Structures from Ab Initio Molecular Dynamics. The journal of physical chemistry letters 14 (19) (2023)
Vojtech Kostal, Pavel Jungwirth, Hector Martinez-Seara
Nonaqueous Ion Pairing Exemplifies the Case for Including Electronic Polarization in Molecular Dynamics Simulations. The journal of physical chemistry letters (2023)
Petro Khoroshyy, Hector Martinez-Seara, Jitka Myšková, Josef Lazar
Dynamics of transition dipole moment orientation in representative fluorescent proteins. Physical chemistry chemical physics : PCCP (2023)
Vojtech Kostal, Philip E Mason, Hector Martinez-Seara, Pavel Jungwirth
Common Cations Are Not Polarizable: Effects of Dispersion Correction on Hydration Structures from Ab Initio Molecular Dynamics. The journal of physical chemistry letters 14 (19) (2023)
Vladimir Palivec, Christian Johannessen, Jakub Kaminský, Hector Martinez-Seara
Use of Raman and Raman optical activity to extract atomistic details of saccharides in aqueous solution. PLoS computational biology 18 (1) (2022)
Man Thi Hong Nguyen, Denys Biriukov, Carmelo Tempra, Katarina Baxova, Hector Martinez-Seara, Hüseyin Evci, Vandana Singh, Radek Šachl, Martin Hof, Pavel Jungwirth, Matti Javanainen, Mario Vazdar
Ionic Strength and Solution Composition Dictate the Adsorption of Cell-Penetrating Peptides onto Phosphatidylcholine Membranes. Langmuir : the ACS journal of surfaces and colloids 38 (37) (2022)
Vladimír Palivec, Radek Pohl, Jakub Kaminský, Hector Martinez-Seara
Efficiently Computing NMR 1 H and 13 C Chemical Shifts of Saccharides in Aqueous Environment. Journal of chemical theory and computation 18 (7) (2022)
Natalia Lukasheva, Dmitry A Tolmachev, Hector Martinez-Seara, Jonathan F Lovell
Changes in the Local Conformational States Caused by Simple Na + and K + Ions in Polyelectrolyte Simulations: Comparison of Seven Force Fields with and without NBFIX and ECC Corrections. Polymers 14 (2) (2022)
Paulo Cesar Telles de Souza, Riccardo Alessandri, Jonathan Barnoud, Sebastian Thallmair, Ignacio Faustino, Fabian Grünewald, Ilias Patmanidis, Haleh Abdizadeh, Bart Marlon Herwig Bruininks, Tsjerk A Wassenaar, Peter C Kroon, Josef Melcr, Vincent Nieto, Valentina Corradi, Hanif M Khan, Jan Domański, Matti Javanainen, Hector Martinez-Seara, Nathalie Reuter, Robert B Best, Ilpo Vattulainen, Luca Monticelli, Xavier Periole, D Peter Tieleman, Alex H de Vries, Siewert J Marrink
Martini 3: a general purpose force field for coarse-grained molecular dynamics. Nature methods 18 (4) (2021)
Man Thi Hong Nguyen, Ondrej Tichacek, Hector Martinez-Seara, Philip E Mason, Pavel Jungwirth
Resolving the Equal Number Density Puzzle: Molecular Picture from Simulations of LiCl(aq) and NaCl(aq). The journal of physical chemistry. B 125 (12) (2021)
Elise Duboué-Dijon, Matti Javanainen, Pauline Delcroix, Pavel Jungwirth, Hector Martinez-Seara
A practical guide to biologically relevant molecular simulations with charge scaling for electronic polarization. The Journal of chemical physics 153 (5) (2021)
Matti Javanainen, Hector Martinez-Seara, Christopher V Kelly, Pavel Jungwirth, Balázs Fábián
Anisotropic diffusion of membrane proteins at experimental timescales. The Journal of chemical physics 155 (1) (2021)
Sebastian Thallmair, Matti Javanainen, Balázs Fábián, Hector Martinez-Seara, Siewert-Jan Marrink
Nonconverged Constraints Cause Artificial Temperature Gradients in Lipid Bilayer Simulations. The journal of physical chemistry. B 125 (33) (2021)
Denilson Mendes de Oliveira, Samual R Zukowski, Vladimir Palivec, Jérôme Hénin, Hector Martinez-Seara, Dor Ben-Amotz, Pavel Jungwirth, Elise Duboué-Dijon
Binding of divalent cations to acetate: molecular simulations guided by Raman spectroscopy. Physical chemistry chemical physics : PCCP 22 (41) (2020)
Matti Javanainen, O H Samuli Ollila, Hector Martinez-Seara
Rotational Diffusion of Membrane Proteins in Crowded Membranes. The journal of physical chemistry. B 124 (15) (2020)
Vladimir Palivec, Vladimír Kopecký, Pavel Jungwirth, Petr Bouř, Jakub Kaminský, Hector Martinez-Seara
Simulation of Raman and Raman optical activity of saccharides in solution. Physical chemistry chemical physics : PCCP 22 (4) (2020)
Fabio Lolicato, Loic Joly, Hector Martinez-Seara, Giovanna Fragneto, Ernesto Scoppola, Francesca Baldelli Bombelli, Ilpo Vattulainen, Jaakko Akola, Marco Maccarini
The Role of Temperature and Lipid Charge on Intake/Uptake of Cationic Gold Nanoparticles into Lipid Bilayers. Small (Weinheim an der Bergstrasse, Germany) 15 (23) (2019)
Matti Javanainen, Giray Enkavi, Ramon Guixà-Gonzaléz, Waldemar Kulig, Hector Martinez-Seara, Ilya Levental, Ilpo Vattulainen
Reduced level of docosahexaenoic acid shifts GPCR neuroreceptors to less ordered membrane regions. PLoS computational biology 15 (5) (2019)
Dmitry A Tolmachev, O S Boyko, N V Lukasheva, Hector Martinez-Seara, Jonathan F Lovell
Overbinding and Qualitative and Quantitative Changes Caused by Simple Na+ and K+ Ions in Polyelectrolyte Simulations: Comparison of Force Fields with and without NBFIX and ECC Corrections. Journal of chemical theory and computation 16 (1) (2019)
Elise Duboué-Dijon, Pauline Delcroix, Hector Martinez-Seara, Jana Hladílková, Pavel Coufal, Tomáš Křížek, Pavel Jungwirth
Binding of Divalent Cations to Insulin: Capillary Electrophoresis and Molecular Simulations. The journal of physical chemistry. B 122 (21) (2018)
Josef Melcr, Hector Martinez-Seara, Ricky Nencini, Jiří Kolafa, Pavel Jungwirth, O H Samuli Ollila
Accurate Binding of Sodium and Calcium to a POPC Bilayer by Effective Inclusion of Electronic Polarization. The journal of physical chemistry. B 122 (16) (2018)
Matti Javanainen, Adéla Melcrová, Aniket Magarkar, Piotr Jurkiewicz, Martin Hof, Pavel Jungwirth, Hector Martinez-Seara
Two cations, two mechanisms: interactions of sodium and calcium with zwitterionic lipid membranes. Chemical communications (Cambridge, England) 53 (39) (2018)
Ramon Guixà-González, José L Albasanz, Ismael Rodríguez-Espigares, Manuel Pastor, Ferran Sanz, Maria Martí-Solano, Moutusi Manna, Hector Martinez-Seara, Peter W Hildebrand, Mairena Martín, Jana Selent
Membrane cholesterol access into a G-protein-coupled receptor. Nature communications 8 (2017)
Matti Javanainen, Hector Martinez-Seara, Ilpo Vattulainen
Nanoscale Membrane Domain Formation Driven by Cholesterol. Scientific reports 7 (1) (2017)
Matti Javanainen, Hector Martinez-Seara, Ilpo Vattulainen
Excessive aggregation of membrane proteins in the Martini model. PloS one 12 (11) (2017)
Joni Vuorio, Ilpo Vattulainen, Hector Martinez-Seara
Atomistic fingerprint of hyaluronan-CD44 binding. PLoS computational biology 13 (7) (2017)

Hector Martinez-Seara.css-eqlu8i{font-size:small;padding-left:4px;} (H Martinez-Seara)

Publication Activity (10 Years)

Top Topics

Top Venues

Hector Martinez-Seara (H Martinez-Seara)