Huaiyu Mi

ORCID

Publication Activity (10 Years)

Years Active: 2019-2023
Publications (10 Years): 9

Top Venues

Nucleic acids research

Nature protocols

NPJ systems biology and applications

Nature genetics

Keck School of Medicine of USC

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Keck School of Medicine of USC Jan 01 2011

United States

Associate Professor :: Preventive Medicine

Publications

Caitlin Mills, Crystal N Marconett, Juan Pablo Lewinger, Huaiyu Mi
PEACOCK: a machine learning approach to assess the validity of cell type-specific enhancer-gene regulatory relationships. NPJ systems biology and applications 9 (1) (2023)
Zhu Liu, Tremayne Mushayahama, Bryan Queme, Dustin Ebert, Anushya Muruganujan, Caitlin Mills, Paul D Thomas, Huaiyu Mi
Annotation Query (AnnoQ): an integrated and interactive platform for large-scale genetic variant annotation. Nucleic acids research (2022)
Typhaine Paysan-Lafosse, Matthias Blum, Sara Rocío Chuguransky, Tiago Grego, Beatriz Lázaro Pinto, Gustavo A Salazar, Maxwell L Bileschi, Peer Bork, Alan J Bridge, Lucy J Colwell, Julian Gough, Daniel H Haft, Ivica Letunic, Aron Marchler-Bauer, Huaiyu Mi, Darren A Natale, Christine A Orengo, Arun Prasad Pandurangan, Catherine Rivoire, Christian J A Sigrist, Ian Sillitoe, Narmada Thanki, Paul D Thomas, Silvio C E Tosatto, Cathy H Wu, Alex Bateman
InterPro in 2022. Nucleic acids research (2022)
George G Vega Yon, Duncan C Thomas, John L Morrison, Huaiyu Mi, Paul D Thomas, Paul Marjoram
Bayesian parameter estimation for automatic annotation of gene functions using observational data and phylogenetic trees. PLoS computational biology 17 (2) (2021)
Paul D Thomas, Dustin Ebert, Anushya Muruganujan, Tremayne Mushayahama, Laurent-Philippe Albou, Huaiyu Mi
PANTHER: Making genome-scale phylogenetics accessible to all. Protein science : a publication of the Protein Society (2021)
Paul D Thomas, David P Hill, Huaiyu Mi, David Osumi-Sutherland, Kimberly M Van Auken, Seth J Carbon, James P Balhoff, Laurent-Philippe Albou, Benjamin M Good, Pascale Gaudet, Suzanna E Lewis, Christopher John Mungall
Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems. Nature genetics 51 (10) (2020)
Caitlin Mills, Anushya Muruganujan, Dustin Ebert, Crystal N Marconett, Juan Pablo Lewinger, Paul D Thomas, Huaiyu Mi
PEREGRINE: A genome-wide prediction of enhancer to gene relationships supported by experimental evidence. PloS one 15 (12) (2020)
Adrien Rougny, Vasundra Touré, Stuart Moodie, Irina Balaur, Tobias Czauderna, Hanna Borlinghaus, Ugur Dogrusoz, Alexander Mazein, Andreas Dräger, Michael L Blinov, Alice Villéger, Robin Haw, Emek Demir, Huaiyu Mi, Anatoly Sorokin, Falk Schreiber, Augustin Luna
Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0. Journal of integrative bioinformatics 16 (2) (2019)
Huaiyu Mi, Anushya Muruganujan, Xiaosong Huang, Dustin Ebert, Caitlin Mills, Xinyu Guo, Paul D Thomas
Protocol Update for large-scale genome and gene function analysis with the PANTHER classification system (v.14.0). Nature protocols 14 (3) (2019)

Huaiyu Mi.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Huaiyu Mi