Jamie H D Cate (Jamie Cate, Jamie Hd Cate, Jamie H Cate)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 38

Top Topics

Escherichia Coli

Genome Wide Association

Top Venues

bioRxiv : the preprint server for biology

RNA (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Angélica M González-Sánchez, Eimy A Castellanos-Silva, Gabriela Díaz-Figueroa, Jamie H D Cate
JUN mRNA translation regulation is mediated by multiple 5' UTR and start codon features. PloS one 19 (3) (2024)
Yekaterina Shulgina, Marena I Trinidad, Conner J Langeberg, Hunter M Nisonoff, Seyone Chithrananda, Petr Skopintsev, Amos J Nissley, Jaymin R Patel, Ron S Boger, Honglue Shi, Peter H Yoon, Erin E Doherty, Tara Pande, Aditya M Iyer, Jennifer A Doudna, Jamie H D Cate
RNA language models predict mutations that improve RNA function. bioRxiv : the preprint server for biology (2024)
Angélica M González-Sánchez, Eimy A Castellanos-Silva, Gabriela Díaz-Figueroa, Jamie H D Cate
JUN mRNA translation regulation is mediated by multiple 5' UTR and start codon features. PloS one 19 (3) (2024)
Angélica M González-Sánchez, Eimy A Castellanos-Silva, Gabriela Díaz-Figueroa, Jamie H D Cate
JUN mRNA translation regulation is mediated by multiple 5' UTR and start codon features. PloS one 19 (3) (2024)
Yekaterina Shulgina, Marena I Trinidad, Conner J Langeberg, Hunter M Nisonoff, Seyone Chithrananda, Petr Skopintsev, Amos J Nissley, Jaymin R Patel, Ron S Boger, Honglue Shi, Peter H Yoon, Erin E Doherty, Tara Pande, Aditya M Iyer, Jennifer A Doudna, Jamie H D Cate
RNA language models predict mutations that improve RNA function. bioRxiv : the preprint server for biology (2024)
Yekaterina Shulgina, Marena I Trinidad, Conner J Langeberg, Hunter M Nisonoff, Seyone Chithrananda, Petr Skopintsev, Amos J Nissley, Jaymin R Patel, Ron S Boger, Honglue Shi, Peter H Yoon, Erin E Doherty, Tara Pande, Aditya M Iyer, Jennifer A Doudna, Jamie H D Cate
RNA language models predict mutations that improve RNA function. bioRxiv : the preprint server for biology (2024)
Yekaterina Shulgina, Marena I Trinidad, Conner J Langeberg, Hunter M Nisonoff, Seyone Chithrananda, Petr Skopintsev, Amos J Nissley, Jaymin R Patel, Ron S Boger, Honglue Shi, Peter H Yoon, Erin E Doherty, Tara Pande, Aditya M Iyer, Jennifer A Doudna, Jamie H D Cate
RNA language models predict mutations that improve RNA function. bioRxiv : the preprint server for biology (2024)
Angélica M González-Sánchez, Eimy A Castellanos-Silva, Gabriela Díaz-Figueroa, Jamie H D Cate
JUN mRNA translation regulation is mediated by multiple 5' UTR and start codon features. PloS one 19 (3) (2024)
Angélica M González-Sánchez, Eimy A Castellanos-Silva, Gabriela Díaz-Figueroa, Jamie H D Cate
JUN mRNA translation regulation is mediated by multiple 5' UTR and start codon features. PloS one 19 (3) (2024)
Angélica M González-Sánchez, Eimy A Castellanos-Silva, Gabriela Díaz-Figueroa, Jamie H D Cate
JUN mRNA Translation Regulation is Mediated by Multiple 5' UTR and Start Codon Features. bioRxiv : the preprint server for biology (2023)
Amos J Nissley, Tammam S Kamal, Jamie H D Cate
Interactions between terminal ribosomal RNA helices stabilize the Escherichia coli large ribosomal subunit. RNA (New York, N.Y.) (2023)
Nikolay A Aleksashin, Stacey Tsai-Lan Chang, Jamie H D Cate
A highly efficient human cell-free translation system. bioRxiv : the preprint server for biology (2023)
Marina P Volegova, Cynthia Hermosillo, Jamie H D Cate
The Helix-Loop-Helix motif of human EIF3A regulates translation of proliferative cellular mRNAs. PloS one 18 (9) (2023)
Eric Westhof, Zoe L Watson, Craig L Zirbel, Jamie H D Cate
Anionic G•U pairs in bacterial ribosomal rRNAs. RNA (New York, N.Y.) (2023)
Nikolay A Aleksashin, Stacey Tsai-Lan Chang, Jamie H D Cate
A highly efficient human cell-free translation system. bioRxiv : the preprint server for biology (2023)
Zoe L Watson, Isaac J Knudson, Fred R Ward, Scott J Miller, Jamie H D Cate, Alanna Schepartz, Ara M Abramyan
Atomistic simulations of the Escherichia coli ribosome provide selection criteria for translationally active substrates. Nature chemistry (2023)
Nikolay A Aleksashin, Stacey Tsai-Lan Chang, Jamie H D Cate
A highly efficient human cell-free translation system. RNA (New York, N.Y.) (2023)
Amos J Nissley, Petar I Penev, Zoe L Watson, Jillian F Banfield, Jamie H D Cate
Rare ribosomal RNA sequences from archaea stabilize the bacterial ribosome. Nucleic acids research (2023)
Santi Mestre-Fos, Lucas Ferguson, Marena Trinidad, Nicholas T Ingolia, Jamie H D Cate
eIF3 engages with 3'-UTR termini of highly translated mRNAs in neural progenitor cells. bioRxiv : the preprint server for biology (2023)
Chandrima Majumdar, Joshua A Walker, Matthew B Francis, Alanna Schepartz, Jamie H D Cate
Aminobenzoic Acid Derivatives Obstruct Induced Fit in the Catalytic Center of the Ribosome. ACS central science 9 (6) (2023)
Amos J Nissley, Petar I Penev, Zoe L Watson, Jillian F Banfield, Jamie H D Cate
Rare ribosomal RNA sequences from archaea stabilize the bacterial ribosome. Nucleic acids research 51 (4) (2023)
Connor A Tsuchida, Nadav Brandes, Raymund Bueno, Marena I Trinidad, Thomas Mazumder, Bingfei Yu, Byungjin Hwang, Christopher Chang, Jamin Liu, Yang Sun, Caitlin R Hopkins, Kevin R Parker, Yanyan Qi, Ansuman T Satpathy, Edward A Stadtmauer, Jamie H D Cate, Justin Eyquem, Joseph A Fraietta, Carl H June, Howard Y Chang, Chun Jimmie Ye, Jennifer A Doudna
Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells. bioRxiv : the preprint server for biology (2023)
Amos J Nissley, Petar I Penev, Zoe L Watson, Jillian F Banfield, Jamie H D Cate
Rare ribosomal RNA sequences from archaea stabilize the bacterial ribosome. Nucleic acids research 51 (4) (2023)
Christine He, Ray Keren, Michael L Whittaker, Ibrahim F Farag, Jennifer A Doudna, Jamie H D Cate, Jillian F Banfield
Genome-resolved metagenomics reveals site-specific diversity of episymbiotic CPR bacteria and DPANN archaea in groundwater ecosystems. Nature microbiology 6 (3) (2021)
Dasmanthie De Silva, Lucas Ferguson, Grant H Chin, Benjamin E Smith, Ryan A Apathy, Theodore L Roth, Franziska Blaeschke, Marek Kudla, Alexander Marson, Nicholas T Ingolia, Jamie H D Cate
Robust T cell activation requires an eIF3-driven burst in T cell receptor translation. eLife 10 (2021)
Zoe L Watson, Fred R Ward, Raphaël Méheust, Omer Ad, Alanna Schepartz, Jillian F Banfield, Jamie H D Cate
Structure of the bacterial ribosome at 2 Å resolution. eLife 9 (2020)
Wenfei Li, Stacey Tsai-Lan Chang, Fred R Ward, Jamie H D Cate
Selective inhibition of human translation termination by a drug-like compound. Nature communications 11 (1) (2020)
Nadège Liaud, Max A Horlbeck, Luke A Gilbert, Ketrin Gjoni, Jonathan S Weissman, Jamie H D Cate
Cellular response to small molecules that selectively stall protein synthesis by the ribosome. PLoS genetics 15 (3) (2019)
Jing-Jing Liu, Guo-Chang Zhang, Suryang Kwak, Eun Joong Oh, Eun Ju Yun, Kulika Chomvong, Jamie H D Cate, Yong-Su Jin
Overcoming the thermodynamic equilibrium of an isomerization reaction through oxidoreductive reactions for biotransformation. Nature communications 10 (1) (2019)
Dmitrii Y Travin, Zoe L Watson, Mikhail Metelev, Fred R Ward, Ilya A Osterman, Irina M Khven, Nelli F Khabibullina, Marina V Serebryakova, Peter Mergaert, Yury S Polikanov, Jamie H D Cate, Konstantin Severinov
Structure of ribosome-bound azole-modified peptide phazolicin rationalizes its species-specific mode of bacterial translation inhibition. Nature communications 10 (1) (2019)
Mia C Pulos-Holmes, Daniel N Srole, Maria G Juarez, Amy S-Y Lee, David Trombley McSwiggen, Nicholas T Ingolia, Jamie H D Cate
Repression of ferritin light chain translation by human eIF3. eLife 8 (2019)
Fred R Ward, Zoe L Watson, Omer Ad, Alanna Schepartz, Jamie H D Cate
Defects in the Assembly of Ribosomes Selected for β-Amino Acid Incorporation. Biochemistry 58 (45) (2019)
Wenfei Li, Fred R Ward, Kim F McClure, Stacey Tsai-Lan Chang, Elizabeth Montabana, Spiros Liras, Robert G Dullea, Jamie H D Cate
Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nature structural & molecular biology 26 (6) (2019)
Allyn T Londregan, Liuqing Wei, Jun Xiao, Nathanael G Lintner, Donna Petersen, Robert G Dullea, Kim F McClure, Michael W Bolt, Joseph S Warmus, Steven B Coffey, Chris Limberakis, Julien Genovino, Benjamin A Thuma, Kevin D Hesp, Gary E Aspnes, Benjamin Reidich, Christopher T Salatto, Jeffrey R Chabot, Jamie H D Cate, Spiros Liras, David W Piotrowski
Small Molecule Proprotein Convertase Subtilisin/Kexin Type 9 (PCSK9) Inhibitors: Hit to Lead Optimization of Systemic Agents. Journal of medicinal chemistry 61 (13) (2018)
Jamie H D Cate
Human eIF3: from 'blobology' to biological insight. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 372 (1716) (2017)
Chenlu Zhang, Ligia Acosta-Sampson, Vivian Yaci Yu, Jamie H D Cate
Screening of transporters to improve xylodextrin utilization in the yeast Saccharomyces cerevisiae. PloS one 12 (9) (2017)
Nathanael G Lintner, Kim F McClure, Donna Petersen, Allyn T Londregan, David W Piotrowski, Liuqing Wei, Jun Xiao, Michael Bolt, Paula M Loria, Bruce Maguire, Kieran F Geoghegan, Austin Huang, Tim Rolph, Spiros Liras, Jennifer A Doudna, Robert G Dullea, Jamie H D Cate
Selective stalling of human translation through small-molecule engagement of the ribosome nascent chain. PLoS biology 15 (3) (2017)
Ligia Acosta-Sampson, Kristina Döring, Yuping Lin, Vivian Y Yu, Bernd Bukau, Günter Kramer, Jamie H D Cate
Role for ribosome-associated complex and stress-seventy subfamily B (RAC-Ssb) in integral membrane protein translation. The Journal of biological chemistry 292 (48) (2017)