Ansuman T Satpathy (Ansuman Satpathy)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 84

Top Topics

Transcription Factor

Mitochondrial Dna

Dendritic Cells

Top Venues

Nature genetics

bioRxiv : the preprint server for biology

Nature immunology

This page only lists publications with an associated author ORCID identifier.

Publications

Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature 629 (8010) (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
Publisher Correction: FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
Publisher Correction: FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Arjun Scott Nanda, Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S Clugston, Leanne C Sayles, Lingru Xu, Ansuman T Satpathy, Hao G Nguyen, E Alejandro Sweet-Cordero, Hani Goodarzi, Sivakanthan Kasinathan, Vijay Ramani
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. Nature genetics (2024)
Tsion Abay, Robert R Stickels, Meril T Takizawa, Benan N Nalbant, Yu-Hsin Hsieh, Sidney Hwang, Catherine Snopkowski, Kenny Kwok Hei Yu, Zaki Abou-Mrad, Viviane Tabar, Leif S Ludwig, Ronan Chaligné, Ansuman T Satpathy, Caleb A Lareau
Transcript-specific enrichment enables profiling rare cell states via scRNA-seq. bioRxiv : the preprint server for biology (2024)
Arjun Scott Nanda, Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S Clugston, Leanne C Sayles, Lingru Xu, Ansuman T Satpathy, Hao G Nguyen, E Alejandro Sweet-Cordero, Hani Goodarzi, Sivakanthan Kasinathan, Vijay Ramani
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. Nature genetics 56 (6) (2024)
Arjun Scott Nanda, Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S Clugston, Leanne C Sayles, Lingru Xu, Ansuman T Satpathy, Hao G Nguyen, E Alejandro Sweet-Cordero, Hani Goodarzi, Sivakanthan Kasinathan, Vijay Ramani
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. Nature genetics 56 (6) (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Arjun Scott Nanda, Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S Clugston, Leanne C Sayles, Lingru Xu, Ansuman T Satpathy, Hao G Nguyen, E Alejandro Sweet-Cordero, Hani Goodarzi, Sivakanthan Kasinathan, Vijay Ramani
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. Nature genetics 56 (6) (2024)
Arjun Scott Nanda, Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S Clugston, Leanne C Sayles, Lingru Xu, Ansuman T Satpathy, Hao G Nguyen, E Alejandro Sweet-Cordero, Hani Goodarzi, Sivakanthan Kasinathan, Vijay Ramani
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. Nature genetics (2024)
Arjun Scott Nanda, Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S Clugston, Leanne C Sayles, Lingru Xu, Ansuman T Satpathy, Hao G Nguyen, E Alejandro Sweet-Cordero, Hani Goodarzi, Sivakanthan Kasinathan, Vijay Ramani
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. Nature genetics 56 (6) (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Cody T Mowery, Jacob W Freimer, Zeyu Chen, Salvador Casaní-Galdón, Jennifer M Umhoefer, Maya M Arce, Ketrin Gjoni, Bence Daniel, Katalin D Sandor, Benjamin G Gowen, Vinh Nguyen, Dimitre R Simeonov, Christian M Garrido, Gemma L Curie, Ralf Schmidt, Zachary Steinhart, Ansuman T Satpathy, Katherine S Pollard, Jacob E Corn, Bradley E Bernstein, Chun Jimmie Ye, Alexander Marson
Systematic decoding of cis gene regulation defines context-dependent control of the multi-gene costimulatory receptor locus in human T cells. Nature genetics 56 (6) (2024)
Arjun Scott Nanda, Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S Clugston, Leanne C Sayles, Lingru Xu, Ansuman T Satpathy, Hao G Nguyen, E Alejandro Sweet-Cordero, Hani Goodarzi, Sivakanthan Kasinathan, Vijay Ramani
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. Nature genetics (2024)
Tsion Abay, Robert R Stickels, Meril T Takizawa, Benan N Nalbant, Yu-Hsin Hsieh, Sidney Hwang, Catherine Snopkowski, Kenny Kwok Hei Yu, Zaki Abou-Mrad, Viviane Tabar, Leif S Ludwig, Ronan Chaligné, Ansuman T Satpathy, Caleb A Lareau
Transcript-specific enrichment enables profiling rare cell states via scRNA-seq. bioRxiv : the preprint server for biology (2024)
Cody T Mowery, Jacob W Freimer, Zeyu Chen, Salvador Casaní-Galdón, Jennifer M Umhoefer, Maya M Arce, Ketrin Gjoni, Bence Daniel, Katalin D Sandor, Benjamin G Gowen, Vinh Nguyen, Dimitre R Simeonov, Christian M Garrido, Gemma L Curie, Ralf Schmidt, Zachary Steinhart, Ansuman T Satpathy, Katherine S Pollard, Jacob E Corn, Bradley E Bernstein, Chun Jimmie Ye, Alexander Marson
Systematic decoding of cis gene regulation defines context-dependent control of the multi-gene costimulatory receptor locus in human T cells. Nature genetics 56 (6) (2024)
Cody T Mowery, Jacob W Freimer, Zeyu Chen, Salvador Casaní-Galdón, Jennifer M Umhoefer, Maya M Arce, Ketrin Gjoni, Bence Daniel, Katalin D Sandor, Benjamin G Gowen, Vinh Nguyen, Dimitre R Simeonov, Christian M Garrido, Gemma L Curie, Ralf Schmidt, Zachary Steinhart, Ansuman T Satpathy, Katherine S Pollard, Jacob E Corn, Bradley E Bernstein, Chun Jimmie Ye, Alexander Marson
Systematic decoding of cis gene regulation defines context-dependent control of the multi-gene costimulatory receptor locus in human T cells. Nature genetics (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature 629 (8010) (2024)
Cody T Mowery, Jacob W Freimer, Zeyu Chen, Salvador Casaní-Galdón, Jennifer M Umhoefer, Maya M Arce, Ketrin Gjoni, Bence Daniel, Katalin D Sandor, Benjamin G Gowen, Vinh Nguyen, Dimitre R Simeonov, Christian M Garrido, Gemma L Curie, Ralf Schmidt, Zachary Steinhart, Ansuman T Satpathy, Katherine S Pollard, Jacob E Corn, Bradley E Bernstein, Chun Jimmie Ye, Alexander Marson
Systematic decoding of cis gene regulation defines context-dependent control of the multi-gene costimulatory receptor locus in human T cells. Nature genetics 56 (6) (2024)
Bence Daniel, Andy Y Chen, Katalin D Sandor, Wenxi Zhang, Zhuang Miao, Caleb A Lareau, Kathryn E Yost, Howard Y Chang, Ansuman T Satpathy
Regulation of immune signal integration and memory by inflammation-induced chromosome conformation. bioRxiv : the preprint server for biology (2024)
Tsion Abay, Robert R Stickels, Meril T Takizawa, Benan N Nalbant, Yu-Hsin Hsieh, Sidney Hwang, Catherine Snopkowski, Kenny Kwok Hei Yu, Zaki Abou-Mrad, Viviane Tabar, Leif S Ludwig, Ronan Chaligné, Ansuman T Satpathy, Caleb A Lareau
Transcript-specific enrichment enables profiling rare cell states via scRNA-seq. bioRxiv : the preprint server for biology (2024)
Cody T Mowery, Jacob W Freimer, Zeyu Chen, Salvador Casaní-Galdón, Jennifer M Umhoefer, Maya M Arce, Ketrin Gjoni, Bence Daniel, Katalin D Sandor, Benjamin G Gowen, Vinh Nguyen, Dimitre R Simeonov, Christian M Garrido, Gemma L Curie, Ralf Schmidt, Zachary Steinhart, Ansuman T Satpathy, Katherine S Pollard, Jacob E Corn, Bradley E Bernstein, Chun Jimmie Ye, Alexander Marson
Systematic decoding of cis gene regulation defines context-dependent control of the multi-gene costimulatory receptor locus in human T cells. Nature genetics 56 (6) (2024)
Cody T Mowery, Jacob W Freimer, Zeyu Chen, Salvador Casaní-Galdón, Jennifer M Umhoefer, Maya M Arce, Ketrin Gjoni, Bence Daniel, Katalin D Sandor, Benjamin G Gowen, Vinh Nguyen, Dimitre R Simeonov, Christian M Garrido, Gemma L Curie, Ralf Schmidt, Zachary Steinhart, Ansuman T Satpathy, Katherine S Pollard, Jacob E Corn, Bradley E Bernstein, Chun Jimmie Ye, Alexander Marson
Systematic decoding of cis gene regulation defines context-dependent control of the multi-gene costimulatory receptor locus in human T cells. Nature genetics 56 (6) (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature 629 (8010) (2024)
Arjun Scott Nanda, Ke Wu, Iryna Irkliyenko, Brian Woo, Megan S Ostrowski, Andrew S Clugston, Leanne C Sayles, Lingru Xu, Ansuman T Satpathy, Hao G Nguyen, E Alejandro Sweet-Cordero, Hani Goodarzi, Sivakanthan Kasinathan, Vijay Ramani
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing. Nature genetics 56 (6) (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature 629 (8010) (2024)
Bence Daniel, Andy Y Chen, Katalin D Sandor, Wenxi Zhang, Zhuang Miao, Caleb A Lareau, Kathryn E Yost, Howard Y Chang, Ansuman T Satpathy
Regulation of immune signal integration and memory by inflammation-induced chromosome conformation. bioRxiv : the preprint server for biology (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Alexander E Doan, Katherine P Mueller, Andy Y Chen, Geoffrey T Rouin, Yingshi Chen, Bence Daniel, John Lattin, Martina Markovska, Brett Mozarsky, Jose Arias-Umana, Robert Hapke, In-Young Jung, Alice Wang, Peng Xu, Dorota D Klysz, Gabrielle Zuern, Malek Bashti, Patrick J Quinn, Zhuang Miao, Katalin D Sandor, Wenxi Zhang, Gregory M Chen, Faith Ryu, Lohitash Karumbaiah, Junior Hall, Kai Tan, Stephan A Grupp, Susan E McClory, Caleb A Lareau, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Crystal L Mackall, Evan W Weber
FOXO1 is a master regulator of memory programming in CAR T cells. Nature (2024)
Hind Bouzid, Julia A Belk, Max Jan, Yanyan Qi, Chloé Sarnowski, Sara Wirth, Lisa Ma, Matthew R Chrostek, Herra Ahmad, Daniel C Nachun, Winnie Yao, null null, Alexa Beiser, Alexander G Bick, Joshua C Bis, Myriam Fornage, William T Longstreth, Oscar L Lopez, Pradeep Natarajan, Bruce M Psaty, Claudia L Satizabal, Joshua S Weinstock, Eric B Larson, Paul K Crane, C Dirk Keene, Sudha Seshadri, Ansuman T Satpathy, Thomas J Montine, Siddhartha Jaiswal
Clonal hematopoiesis is associated with protection from Alzheimer's disease. Nature medicine (2023)
Daniel Haensel, Bence Daniel, Sadhana Gaddam, Cory Pan, Tania Fabo, Jeremy Bjelajac, Anna R Jussila, Fernanda Gonzalez, Nancy Yanzhe Li, Yun Chen, JinChao Hou, Tiffany Patel, Sumaira Aasi, Ansuman T Satpathy, Anthony E Oro
Skin basal cell carcinomas assemble a pro-tumorigenic spatially organized and self-propagating Trem2+ myeloid niche. Nature communications 14 (1) (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature 615 (7952) (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature 615 (7952) (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature 615 (7952) (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature (2023)
Caleb A Lareau, Sonia M Dubois, Frank A Buquicchio, Yu-Hsin Hsieh, Kopal Garg, Pauline Kautz, Lena Nitsch, Samantha D Praktiknjo, Patrick Maschmeyer, Jeffrey M Verboon, Jacob C Gutierrez, Yajie Yin, Evgenij Fiskin, Wendy Luo, Eleni P Mimitou, Christoph Muus, Rhea Malhotra, Sumit Parikh, Mark Daniel Fleming, Lena Oevermann, Johannes Hubertus Schulte, Cornelia Eckert, Anshul Kundaje, Peter Smibert, Santosha A Vardhana, Ansuman T Satpathy, Aviv Regev, Vijay G Sankaran, Suneet Agarwal, Leif S Ludwig
Single-cell multi-omics of mitochondrial DNA disorders reveals dynamics of purifying selection across human immune cells. Nature genetics (2023)
Daniel Haensel, Bence Daniel, Sadhana Gaddam, Cory Pan, Tania Fabo, Jeremy Bjelajac, Anna R Jussila, Fernanda Gonzalez, Nancy Yanzhe Li, Yun Chen, JinChao Hou, Tiffany Patel, Sumaira Aasi, Ansuman T Satpathy, Anthony E Oro
Skin basal cell carcinomas assemble a pro-tumorigenic spatially organized and self-propagating Trem2+ myeloid niche. Nature communications 14 (1) (2023)
Christopher S McGinnis, Zhuang Miao, Nathan E Reticker-Flynn, Juliane Winkler, Ansuman T Satpathy
The temporal progression of immune remodeling during metastasis. bioRxiv : the preprint server for biology (2023)
Caleb A Lareau, Yajie Yin, Katie Maurer, Katalin D Sandor, Bence Daniel, Garima Yagnik, José Peña, Jeremy Chase Crawford, Stephan Mielke, Jacob C Gutierrez, Nicholas J Haradhvala, Janice M Riberdy, Tsion Abay, Robert R Stickels, Jeffrey M Verboon, Vincent Liu, Frank A Buquicchio, Fangyi Wang, Jackson Southard, Ren Song, Wenjing Li, Aastha Shrestha, Laxmi Parida, Gad A Getz, Marcela V Maus, Shuqiang Li, Alison Moore, Zachary J Roberts, Leif S Ludwig, Aimee C Talleur, Paul Glyndwr Thomas, Houman Dehghani, Thomas Pertel, Anshul Kundaje, Stephen Gottschalk, Theodore L Roth, Marie José Kersten, Catherine J Wu, Robbie G Majzner, Ansuman T Satpathy
Latent human herpesvirus 6 is reactivated in CAR T cells. Nature (2023)
Caleb A Lareau, Vincent Liu, Christoph Muus, Samantha D Praktiknjo, Lena Nitsch, Pauline Kautz, Katalin D Sandor, Yajie Yin, Jacob C Gutierrez, Karin Pelka, Ansuman T Satpathy, Aviv Regev, Vijay G Sankaran, Leif S Ludwig
Mitochondrial single-cell ATAC-seq for high-throughput multi-omic detection of mitochondrial genotypes and chromatin accessibility. Nature protocols (2023)
Connor A Tsuchida, Nadav Brandes, Raymund Bueno, Marena I Trinidad, Thomas Mazumder, Bingfei Yu, Byungjin Hwang, Christopher Chang, Jamin Liu, Yang Sun, Caitlin R Hopkins, Kevin R Parker, Yanyan Qi, Ansuman T Satpathy, Edward A Stadtmauer, Jamie H D Cate, Justin Eyquem, Joseph A Fraietta, Carl H June, Howard Y Chang, Chun Jimmie Ye, Jennifer A Doudna
Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells. bioRxiv : the preprint server for biology (2023)
Joshua S Weinstock, Jayakrishnan Gopakumar, Bala Bharathi Burugula, M D Mesbah Uddin, Nikolaus Jahn, Julia A Belk, Hind Bouzid, Bence Daniel, Zhuang Miao, Nghi Ly, Taralynn M Mack, Sofia E Luna, Katherine P Prothro, Shaneice R Mitchell, Cecelia A Laurie, Jai G Broome, Kent D Taylor, Xiuqing Guo, Moritz F Sinner, Aenne S von Falkenhausen, Stefan Kääb, Alan R Shuldiner, Jeffrey R O'Connell, Joshua P Lewis, Eric Boerwinkle, Kathleen C Barnes, Nathalie Chami, Eimear E Kenny, Ruth J F Loos, Myriam Fornage, Lifang Hou, Donald M Lloyd-Jones, Susan Redline, Brian E Cade, Bruce M Psaty, Joshua C Bis, Jennifer A Brody, Edwin K Silverman, Jeong H Yun, Dandi Qiao, Nicholette D D Allred, Barry I Freedman, Donald W Bowden, Michael H Cho, Dawn L DeMeo, Ramachandran S Vasan, Lisa R Yanek, Lewis C Becker, Sharon L R Kardia, Patricia A Peyser, Jiang He, Michiel Rienstra, Pim Van der Harst, Robert Kaplan, Susan R Heckbert, Nicholas L Smith, Kerri L Wiggins, Donna K Arnett, Marguerite R Irvin, Hemant Tiwari, Michael J Cutler, Stacey Knight, J Brent Muhlestein, Adolfo Correa, Laura M Raffield, Yan Gao, Mariza de Andrade, Jerome I Rotter, Stephen S Rich, Russell P Tracy, Barbara A Konkle, Jill M Johnsen, Marsha M Wheeler, J Gustav Smith, Olle Melander, Peter M Nilssson, Brian S Custer, Ravindranath Duggirala, Joanne E Curran, John E Blangero, Stephen T McGarvey, L Keoki Williams, Shujie Xiao, Mao Yang, C Charles Gu, Yii-Der Ida Chen, Wen-Jane Lee, Gregory M Marcus, John P Kane, Clive R Pullinger, M Benjamin Shoemaker, Dawood Darbar, Dan M Roden, Christine Albert, Charles Kooperberg, Ying Zhou, JoAnn E Manson, Pinkal Desai, Andrew Danner Johnson, Rasika A Mathias, null null, Thomas W Blackwell, Goncalo R Abecasis, Albert Vernon Smith, Hyun M Kang, Ansuman T Satpathy, Pradeep Natarajan, Jacob O Kitzman, Eric A Whitsel, Alexander P Reiner, Alexander G Bick, Siddhartha Jaiswal
Aberrant activation of TCL1A promotes stem cell expansion in clonal haematopoiesis. Nature (2023)
Christopher S McGinnis, Zhuang Miao, Nathan E Reticker-Flynn, Juliane Winkler, Ansuman T Satpathy
The temporal progression of immune remodeling during metastasis. bioRxiv : the preprint server for biology (2023)
Crystal L Mackall, Alexander Doan, Katherine Mueller, Andy Y Chen, Geoffrey Rouin, Bence Daniel, John Lattin, Yingshi Chen, Brett Mozarsky, Martina Markovska, Jose Arias-Umana, Robert Robert Hapke, Inyoung Jung, Peng Xu, Dorota Klysz, Malek Bashti, Patrick J Quinn, Katalin D Sandor, Wenxi Zhang, Junior Hall, Caleb A Lareau, Stephan Grupp, Joseph A Fraietta, Elena Sotillo, Ansuman T Satpathy, Evan Weber
FOXO1 is a master regulator of CAR T memory programming. Research square (2023)
Daniel Haensel, Bence Daniel, Sadhana Gaddam, Cory Pan, Tania Fabo, Jeremy Bjelajac, Anna R Jussila, Fernanda Gonzalez, Nancy Yanzhe Li, Yun Chen, JinChao Hou, Tiffany Patel, Sumaira Aasi, Ansuman T Satpathy, Anthony E Oro
Skin basal cell carcinomas assemble a pro-tumorigenic spatially organized and self-propagating Trem2+ myeloid niche. Nature communications 14 (1) (2023)
Aidan Michael Tousley, Maria Caterina Rotiroti, Louai Labanieh, Lea Wenting Rysavy, Won-Ju Kim, Caleb A Lareau, Elena Sotillo, Evan W Weber, Skyler P Rietberg, Guillermo Nicolas Dalton, Yajie Yin, Dorota Klysz, Peng Xu, Eva L de la Serna, Alexander R Dunn, Ansuman T Satpathy, Crystal L Mackall, Robbie G Majzner
Co-opting signalling molecules enables logic-gated control of CAR T cells. Nature 615 (7952) (2023)
Stefanie L Meier, Ansuman T Satpathy, Daniel K Wells
Bystander T cells in cancer immunology and therapy. Nature cancer 3 (2) (2022)
Katherine A Freitas, Julia A Belk, Elena Sotillo, Patrick J Quinn, Maria C Ramello, Meena Malipatlolla, Bence Daniel, Katalin D Sandor, Dorota D Klysz, Jeremy Bjelajac, Peng Xu, Kylie A Burdsall, Victor Tieu, Vandon T Duong, Micah G Donovan, Evan W Weber, Howard Y Chang, Robbie G Majzner, Joaquín Maximiliano Espinosa, Ansuman T Satpathy, Crystal L Mackall
Enhanced T cell effector activity by targeting the Mediator kinase module. Science (New York, N.Y.) 378 (6620) (2022)
Nathaniel W Mabe, Min Huang, Guillermo N Dalton, Gabriela Alexe, Daniel A Schaefer, Anna C Geraghty, Amanda L Robichaud, Amy S Conway, Delan Khalid, Marius M Mader, Julia A Belk, Kenneth N Ross, Michal Sheffer, Miles H Linde, Nghi Ly, Winnie Yao, Maria Caterina Rotiroti, Benjamin A H Smith, Marius Wernig, Carolyn R Bertozzi, Michelle Monje, Constantine S Mitsiades, Ravindra Majeti, Ansuman T Satpathy, Kimberly Stegmaier, Robbie G Majzner
Transition to a mesenchymal state in neuroblastoma confers resistance to anti-GD2 antibody via reduced expression of ST8SIA1. Nature cancer 3 (8) (2022)
Ranit Kedmi, Tariq A Najar, Kailin R Mesa, Allyssa Grayson, Lina Kroehling, Yuhan Hao, Stephanie Hao, Maria Pokrovskii, Mo Xu, Jhimmy Talbot, Jiaxi Wang, Joe Germino, Caleb A Lareau, Ansuman T Satpathy, Mark S Anderson, Terri M Laufer, Iannis Aifantis, Juliet M Bartleson, Paul M Allen, Helena Paidassi, James M Gardner, Marlon Stoeckius, Dan R Littman
A RORγt + cell instructs gut microbiota-specific T reg cell differentiation. Nature 610 (7933) (2022)
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Divergent clonal differentiation trajectories of T cell exhaustion. Nature immunology 23 (11) (2022)
Jing Li, Maxim E Zaslavsky, Yapeng Su, Jing Guo, Michael J Sikora, Vincent van Unen, Asbjørn O Christophersen, Shin-Heng Chiou, Liang Chen, Jiefu Li, Xuhuai Ji, Julie Wilhelmy, Alana M McSween, Brad A Palanski, Venkata Vamsee Aditya Mallajosyula, Nathan A Bracey, Gopal Krishna R Dhondalay, Kartik Bhamidipati, Joy Pai, Lucas B Kipp, Jeffrey E Dunn, Stephen L Hauser, Jorge R Oksenberg, Ansuman T Satpathy, William H Robinson, Cornelia L Dekker, Lars M Steinmetz, Chaitan Khosla, Paul J Utz, Ludvig M Sollid, Yueh-Hsiu Chien, James R Heath, Nielsen Q Fernandez-Becker, Kari Christine Nadeau, Naresha Saligrama, Mark M Davis
KIR + CD8 + T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19. Science (New York, N.Y.) 376 (6590) (2022)
Carlos A Castellanos, Kamir J Hiam-Galvez, Satoshi Ishido, Ansuman T Satpathy, Jeoung-Sook Shin
MARCH1 Controls an Exhaustion-like Program of Effector CD4<sup>+</sup> T Cells Promoting Allergic Airway Inflammation. ImmunoHorizons 6 (9) (2022)
Julia A Belk, Bence Daniel, Ansuman T Satpathy
Epigenetic regulation of T cell exhaustion. Nature immunology 23 (6) (2022)
Julia Carnevale, Eric Shifrut, Nupura Kale, William A Nyberg, Franziska Blaeschke, Yan Yi Chen, Zhongmei Li, Sagar P Bapat, Morgan E Diolati, Patrick C O'Leary, Shane Vedova, Julia A Belk, Bence Daniel, Theodore L Roth, Stefanie Bachl, Alejandro Allo Anido, Brooke Prinzing, Jorge Ibañez-Vega, Shannon Lange, Dalia Haydar, Marie Luetke-Eversloh, Maelys Born-Bony, Bindu Hegde, Scott C Kogan, Tobias Feuchtinger, Hideho Okada, Ansuman T Satpathy, Kevin Shannon, Stephen Gottschalk, Justin Eyquem, Giedre Krenciute, Alan Ashworth, Alexander Marson
RASA2 ablation in T cells boosts antigen sensitivity and long-term function. Nature 609 (7925) (2022)
Tyler E Miller, Caleb A Lareau, Julia A Verga, Erica A K DePasquale, Vincent Liu, Daniel Ssozi, Katalin D Sandor, Yajie Yin, Leif S Ludwig, Chadi A El Farran, Duncan M Morgan, Ansuman T Satpathy, Gabriel K Griffin, Andrew A Lane, John Christopher Love, Bradley E Bernstein, Vijay G Sankaran, Peter van Galen
Mitochondrial variant enrichment from high-throughput single-cell RNA sequencing resolves clonal populations. Nature biotechnology 40 (7) (2022)
Raíssa Fonseca, Thomas N Burn, Luke C Gandolfo, Sapna Devi, Simone L Park, Andreas Obers, Maximilien Evrard, Susan N Christo, Frank A Buquicchio, Caleb A Lareau, Keely M McDonald, Sarah K Sandford, Natasha M Zamudio, Nagela G Zanluqui, Ali Zaid, Terence P Speed, Ansuman T Satpathy, Scott N Mueller, Francis R Carbone, Laura K Mackay
Runx3 drives a CD8 + T cell tissue residency program that is absent in CD4 + T cells. Nature immunology 23 (8) (2022)
Jiaxi Wang, Caleb A Lareau, Jhoanne L Bautista, Alexander R Gupta, Katalin D Sandor, Joe Germino, Yajie Yin, Matthew P Arvedson, Gabriella C Reeder, Nathan T Cramer, Fang Xie, Vasilis Ntranos, Ansuman T Satpathy, Mark S Anderson, James M Gardner
Single-cell multiomics defines tolerogenic extrathymic Aire-expressing populations with unique homology to thymic epithelium. Science immunology 6 (65) (2021)
Caleb A Lareau, Ansuman T Satpathy
An old BATF's new T-ricks. Nature immunology 21 (11) (2021)
Rebecca M Richards, Feifei Zhao, Katherine A Freitas, Kevin R Parker, Peng Xu, Amy C Fan, Elena Sotillo, Mads Daugaard, Htoo Zarni Oo, Jie Liu, Wan-Jen Hong, Poul H Sorensen, Howard Y Chang, Ansuman T Satpathy, Robbie G Majzner, Ravindra Majeti, Crystal L Mackall
NOT-Gated CD93 CAR T Cells Effectively Target AML with Minimized Endothelial Cross-Reactivity. Blood cancer discovery 2 (6) (2021)
Matthew A Nix, Kamal Mandal, Huimin Geng, Neha Paranjape, Yu-Hsiu T Lin, Jose M Rivera, Makeba Marcoulis, Kristie L White, Jeffrey D Whitman, Sagar P Bapat, Kevin R Parker, Jonathan Ramirez, Anne Deucher, Paul Phojanokong, Veronica Steri, Faranak Fattahi, Byron C Hann, Ansuman T Satpathy, Aashish Manglik, Elliot Stieglitz, Arun P Wiita
Surface Proteomics Reveals CD72 as a Target for In Vitro-Evolved Nanobody-Based CAR-T Cells in KMT2A/MLL1-Rearranged B-ALL. Cancer discovery 11 (8) (2021)
Winnie Yao, Ansuman T Satpathy
Repertoire Remodeling through CD4+ T-cell Depletion. Cancer immunology research 9 (6) (2021)
Saravanan Raju, Yu Xia, Bence Daniel, Kathryn E Yost, Elliot Bradshaw, Elena Tonc, Daniel J Verbaro, Kohei Kometani, Wayne M Yokoyama, Tomohiro Kurosaki, Ansuman T Satpathy, Takashi Ebihara
Identification of a T-bethi Quiescent Exhausted CD8 T Cell Subpopulation That Can Differentiate into TIM3+CX3CR1+ Effectors and Memory-like Cells. Journal of immunology (Baltimore, Md. : 1950) (2021)
Joy A Pai, Ansuman T Satpathy
High-throughput and single-cell T cell receptor sequencing technologies. Nature methods 18 (8) (2021)
Evan W Weber, Kevin R Parker, Elena Sotillo, Rachel C Lynn, Hima Anbunathan, John Lattin, Zinaida Good, Julia A Belk, Bence Daniel, Dorota D Klysz, Meena Malipatlolla, Peng Xu, Malek Bashti, Sabine Heitzeneder, Louai Labanieh, Panayiotis Vandris, Robbie G Majzner, Yanyan Qi, Katalin D Sandor, Ling-Chun Chen, Snehit Prabhu, Andrew J Gentles, Thomas J Wandless, Ansuman T Satpathy, Howard Y Chang, Crystal L Mackall
Transient rest restores functionality in exhausted CAR-T cells through epigenetic remodeling. Science (New York, N.Y.) 372 (6537) (2021)
Jeremy T Warshauer, Julia A Belk, Alice Y Chan, Jiaxi Wang, Alexander R Gupta, Quanming Shi, Nikolaos Skartsis, Yani Peng, Jonah D Phipps, Dante Acenas, Jennifer A Smith, Stanley J Tamaki, Qizhi Tang, James M Gardner, Ansuman T Satpathy, Mark S Anderson
A human mutation in STAT3 promotes type 1 diabetes through a defect in CD8+ T cell tolerance. The Journal of experimental medicine 218 (8) (2021)
King L Hung, Kathryn E Yost, Liangqi Xie, Quanming Shi, Konstantin Helmsauer, Jens Luebeck, Robert Schöpflin, Joshua T Lange, Rocio Chamorro González, Natasha E Weiser, Celine Y Chen, Maria E Stefanova, Ivy Tsz-Lo Wong, Sihan Wu, Siavash R Dehkordi, Connor V Duffy, Katerina Kraft, Jun Tang, Julia A Belk, John C Rose, M Ryan Corces, Jeffrey M Granja, Rui Li, Utkrisht Rajkumar, Jordan Friedlein, Anindya Bagchi, Ansuman T Satpathy, Robert Tjian, Stefan Mundlos, Vineet Bafna, Anton G Henssen, Paul S Mischel, Zhe J Liu, Howard Y Chang
ecDNA hubs drive cooperative intermolecular oncogene expression. Nature (2021)
Jing Li, Maxim E Zaslavsky, Yapeng Su, Michael J Sikora, Vincent van Unen, Asbjørn O Christophersen, Shin-Heng Chiou, Liang Chen, Jiefu Li, Xuhuai Ji, Julie Wilhelmy, Alana M McSween, Brad A Palanski, Venkata Vamsee Aditya Mallajosyula, Gopal Krishna R Dhondalay, Kartik Bhamidipati, Joy Pai, Lucas B Kipp, Jeffrey E Dunn, Stephen L Hauser, Jorge R Oksenberg, Ansuman T Satpathy, William H Robinson, Lars M Steinmetz, Chaitan Khosla, Paul J Utz, Ludvig M Sollid, James R Heath, Nielsen Q Fernandez-Becker, Kari Christine Nadeau, Naresha Saligrama, Mark M Davis
Human KIR + CD8 + T cells target pathogenic T cells in Celiac disease and are active in autoimmune diseases and COVID-19. bioRxiv : the preprint server for biology (2021)
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CRISPR-engineered T cells in patients with refractory cancer. Science (New York, N.Y.) 367 (6481) (2020)
Qian Liu, Lisa C Zaba, Ansuman T Satpathy, Michelle Longmire, Wen Zhang, Kun Li, Jeffrey Granja, Chuang Guo, Jun Lin, Rui Li, Karen Tolentino, Gabriela Kania, Oliver Distler, David Fiorentino, Lorinda Chung, Kun Qu, Howard Y Chang
Chromatin accessibility landscapes of skin cells in systemic sclerosis nominate dendritic cells in disease pathogenesis. Nature communications 11 (1) (2020)
Santosha A Vardhana, Madeline A Hwee, Mirela Berisa, Daniel K Wells, Kathryn E Yost, Bryan H King, Melody Smith, Pamela S Herrera, Howard Y Chang, Ansuman T Satpathy, Marcel R M van den Brink, Justin R Cross, Craig B Thompson
Impaired mitochondrial oxidative phosphorylation limits the self-renewal of T cells exposed to persistent antigen. Nature immunology 21 (9) (2020)
Qian Liu, Lisa C Zaba, Ansuman T Satpathy, Michelle Longmire, Wen Zhang, Kun Li, Jeffrey Granja, Chuang Guo, Jun Lin, Rui Li, Karen Tolentino, Gabriela Kania, Oliver Distler, David Fiorentino, Lorinda Chung, Kun Qu, Howard Y Chang
Author Correction: Chromatin accessibility landscapes of skin cells in systemic sclerosis nominate dendritic cells in disease pathogenesis. Nature communications 11 (1) (2020)
Maxwell R Mumbach, Jeffrey M Granja, Ryan A Flynn, Caitlin M Roake, Ansuman T Satpathy, Adam J Rubin, Yanyan Qi, Zhaozhao Jiang, Shadi Shams, Bryan H Louie, Jimmy K Guo, David G Gennert, M Ryan Corces, Paul A Khavari, Maninjay K Atianand, Steven E Artandi, Katherine A Fitzgerald, William J Greenleaf, Howard Y Chang
HiChIRP reveals RNA-associated chromosome conformation. Nature methods 16 (6) (2019)
Ansuman T Satpathy, Jeffrey M Granja, Kathryn E Yost, Yanyan Qi, Francesca Meschi, Geoffrey P McDermott, Brett N Olsen, Maxwell R Mumbach, Sarah E Pierce, M Ryan Corces, Preyas Shah, Jason C Bell, Darisha Jhutty, Corey M Nemec, Jean Wang, Li Wang, Yifeng Yin, Paul G Giresi, Anne Lynn S Chang, Grace X Y Zheng, William J Greenleaf, Howard Y Chang
Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion. Nature biotechnology 37 (8) (2019)
Jacob C Ulirsch, Caleb A Lareau, Erik L Bao, Leif S Ludwig, Michael H Guo, Christian Benner, Ansuman T Satpathy, Vinay K Kartha, Rany M Salem, Joel N Hirschhorn, Hilary K Finucane, Martin J Aryee, Jason D Buenrostro, Vijay G Sankaran
Interrogation of human hematopoiesis at single-cell and single-variant resolution. Nature genetics 51 (4) (2019)
Vivek Durai, Prachi Bagadia, Jeffrey M Granja, Ansuman T Satpathy, Devesha H Kulkarni, Jesse T Davidson, Renee Wu, Swapneel J Patel, Arifumi Iwata, Tian-Tian Liu, Xiao Huang, Carlos G Briseño, Gary E Grajales-Reyes, Miriam Wöhner, Hiromi Tagoh, Barbara L Kee, Rodney D Newberry, Meinrad Busslinger, Howard Y Chang, Theresa L Murphy, Kenneth M Murphy
Cryptic activation of an Irf8 enhancer governs cDC1 fate specification. Nature immunology 20 (9) (2019)
Prachi Bagadia, Xiao Huang, Tian-Tian Liu, Vivek Durai, Gary E Grajales-Reyes, Maximilian Nitschké, Zora Modrusan, Jeffrey M Granja, Ansuman T Satpathy, Carlos G Briseño, Marco Gargaro, Arifumi Iwata, Sunkyung Kim, Howard Y Chang, Andrey S Shaw, Theresa L Murphy, Kenneth M Murphy
An Nfil3-Zeb2-Id2 pathway imposes Irf8 enhancer switching during cDC1 development. Nature immunology 20 (9) (2019)
Kathryn E Yost, Ansuman T Satpathy, Daniel K Wells, Yanyan Qi, Chunlin Wang, Robin Kageyama, Katherine L McNamara, Jeffrey M Granja, Kavita Y Sarin, Ryanne A Brown, Rohit K Gupta, Christina Curtis, Samantha L Bucktrout, Mark M Davis, Anne Lynn S Chang, Howard Y Chang
Clonal replacement of tumor-specific T cells following PD-1 blockade. Nature medicine 25 (8) (2019)
Elena López-Isac, Marialbert Acosta-Herrera, Martin Kerick, Shervin Assassi, Ansuman T Satpathy, Jeffrey Granja, Maxwell R Mumbach, Lorenzo Beretta, Carmen P Simeón, Patricia Carreira, Norberto Ortego-Centeno, Ivan Castellvi, Lara Bossini-Castillo, Francisco David Carmona, Gisela Orozco, Nicolas Hunzelmann, Jörg H W Distler, Andre Franke, Claudio Lunardi, Gianluca Moroncini, Armando Gabrielli, Jeska de Vries-Bouwstra, Cisca Wijmenga, Bobby P C Koeleman, Annika Nordin, Leonid Padyukov, Anna-Maria Hoffmann-Vold, Benedicte Lie, null null, Susanna Proudman, Wendy Stevens, Mandana Nikpour, null null, Timothy J Vyse, Ariane L Herrick, Jane Worthington, Christopher P Denton, Yannick Allanore, Matthew A Brown, Timothy R D J Radstake, Carmen Fonseca, Howard Y Chang, Maureen D Mayes, Javier Martin
GWAS for systemic sclerosis identifies multiple risk loci and highlights fibrotic and vasculopathy pathways. Nature communications 10 (1) (2019)
Ansuman T Satpathy, Ryanne A Brown, Ellen Gomulia, Carlos G Briseño, Maxwell R Mumbach, Zenggang Pan, Kenneth M Murphy, Yasodha Natkunam, Howard Y Chang, Jinah Kim
Expression of the transcription factor ZBTB46 distinguishes human histiocytic disorders of classical dendritic cell origin. Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 31 (9) (2018)
Ansuman T Satpathy, Naresha Saligrama, Jason D Buenrostro, Yuning Wei, Beijing Wu, Adam J Rubin, Jeffrey M Granja, Caleb A Lareau, Rui Li, Yanyan Qi, Kevin R Parker, Maxwell R Mumbach, William S Serratelli, David G Gennert, Alicia N Schep, M Ryan Corces, Michael S Khodadoust, Youn H Kim, Paul A Khavari, William J Greenleaf, Mark M Davis, Howard Y Chang
Transcript-indexed ATAC-seq for precision immune profiling. Nature medicine 24 (5) (2018)
Joanna E Klementowicz, Ashley E Mahne, Allyson Spence, Vinh Nguyen, Ansuman T Satpathy, Kenneth M Murphy, Qizhi Tang
Cutting Edge: Origins, Recruitment, and Regulation of CD11c+ Cells in Inflamed Islets of Autoimmune Diabetes Mice. Journal of immunology (Baltimore, Md. : 1950) 199 (1) (2017)
Maxwell R Mumbach, Ansuman T Satpathy, Evan August Boyle, Chao Dai, Benjamin G Gowen, Seung Woo Cho, Michelle L Nguyen, Adam J Rubin, Jeffrey M Granja, Katelynn R Kazane, Yuning Wei, Trieu Nguyen, Peyton G Greenside, M Ryan Corces, Josh Tycko, Dimitre R Simeonov, Nabeela Suliman, Rui Li, Jin Xu, Ryan A Flynn, Anshul Kundaje, Paul A Khavari, Alexander Marson, Jacob E Corn, Thomas Quertermous, William J Greenleaf, Howard Y Chang
Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements. Nature genetics 49 (11) (2017)