Jan P Meier-Kolthoff

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 8

Top Venues

The ISME journal

Nature biotechnology

Scientific reports

PLoS computational biology

Leibniz Institute DSMZ

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Leibniz Institute DSMZ Mar 1o 2014

Germany

Researcher / Computer Scientist (Bioinformatics) :: Bioinformatics

Publications

Isabel Schober, Boyke Bunk, Gabriela Carril, Heike M Freese, Nicolás Ojeda, Thomas Riedel, Jan P Meier-Kolthoff, Markus Göker, Cathrin Spröer, Patricio A Flores-Herrera, Guillermo Nourdin-Galindo, Fernando Gómez, Constanza Cárdenas, Felipe Vásquez-Ponce, Alvaro Labra, Jaime Figueroa, Jorge Olivares-Pacheco, Ulrich Nübel, Johannes Sikorski, Sergio H Marshall, Joerg Overmann
Ongoing diversification of the global fish pathogen Piscirickettsia salmonis through genetic isolation and transposition bursts. The ISME journal (2023)
Jan P Meier-Kolthoff, Joaquim Sardà Carbasse, Rosa L Peinado-Olarte, Markus Göker
TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes. Nucleic acids research (2021)
Vera Bischoff, Boyke Bunk, Jan P Meier-Kolthoff, Cathrin Spröer, Holger Brüggemann, Marco Dogs, Mary Nguyen, Jörn Petersen, Rolf Daniel, Jörg Overmann, Markus Göker, Meinhard Simon, Thorsten Brinkhoff, Cristina Moraru
Cobaviruses - a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems. The ISME journal 13 (6) (2019)
Jan P Meier-Kolthoff, Markus Göker
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy. Nature communications 10 (1) (2019)
Lorena Carro, Imen Nouioui, Vartul Sangal, Jan P Meier-Kolthoff, Martha E Trujillo, Maria Del Carmen Montero-Calasanz, Nevzat Sahin, Darren Lee Smith, Kristi E Kim, Paul Peluso, Shweta Deshpande, Tanja Woyke, Nicole Shapiro, Nikos C Kyrpides, Hans-Peter Klenk, Markus Göker, Michael Goodfellow
Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential. Scientific reports 8 (1) (2018)
Supratim Mukherjee, Rekha Seshadri, Neha J Varghese, Emiley A Eloe-Fadrosh, Jan P Meier-Kolthoff, Markus Göker, R Cameron Coates, Michalis Hadjithomas, Georgios A Pavlopoulos, A David Páez-Espino, Yasuo Yoshikuni, Axel Visel, William B Whitman, George M Garrity, Jonathan A Eisen, Philip Hugenholtz, Amrita Pati, Natalia N Ivanova, Tanja Woyke, Hans-Peter Klenk, Nikos C Kyrpides
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. Nature biotechnology 35 (7) (2017)
Aitor Blanco-Míguez, Jan P Meier-Kolthoff, Alberto Gutiérrez-Jácome, Markus Göker, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets. PLoS computational biology 12 (12) (2016)
Ilias Lagkouvardos, Rüdiger Pukall, Birte Abt, Bärbel U Foesel, Jan P Meier-Kolthoff, Neeraj Kumar, Anne Bresciani, Inés Martínez, Sarah Just, Caroline Ziegler, Sandrine Brugiroux, Debora Garzetti, Mareike Wenning, Thi P N Bui, Jun Wang, Floor Hugenholtz, Caroline M Plugge, Daniel A Peterson, Mathias W Hornef, John F Baines, Hauke Smidt, Jens Walter, Karsten Kristiansen, Henrik B Nielsen, Dirk Haller, Joerg Overmann, Bärbel Stecher, Thomas Clavel
The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota. Nature microbiology 1 (10) (2016)

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Publication Activity (10 Years)

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Jan P Meier-Kolthoff