Georgios A Pavlopoulos

Scopus Author ID ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 17

Top Venues

NAR genomics and bioinformatics

Bioinformatics advances

Nucleic acids research

Biomolecules

BSRC 'Alexander Fleming'

European Molecular Biology Laboratory (EMBL) (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

BSRC 'Alexander Fleming' Apr 06 2018

Greece

Head of Bioinformatics (Principal Investigator - Associate Professor) :: Bioinformatics and Computational Biology

University of Athens Medical School

Greece

Head of Bioinformatics :: Center of new Biotechnologies & Precision Medicine

Lawrence Berkeley National Laboratory Nov 02 2015 - Apr 04 2018

United States

Bioinformatics PostDoctoral Researcher :: DOE Joint Genome Institute

University of Crete School of Medicine Jan 01 2013 - Jun 30 2015

Greece

Bioinformatics PostDoctoral Researcher

Katholieke Universiteit Leuven Feb 01 2011 - Dec 31 2012

Belgium

Bioinformatics PostDoctoral Researcher :: Electrical Engineering

Biomedical Sciences Research Center Alexander Fleming Oct 01 2010 - Jan 01 2011

Greece

short-term Bioinformatics PostDoctoral Researcher

University of Thessaly Mar 01 2010 - Aug 01 2010

Greece

Adjunct Lecturer of Bioinformatics :: Computer Science

European Molecular Biology Laboratory May 01 2009 - Sep 01 2009

Germany

short-term Bioinformatics PostDoctoral Researcher

Education History

European Molecular Biology Laboratory (EMBL) Nov 20 2005 - May 11 2009

Germany

PHD :: Bioinformatics

National and Kapodistrian University of Athens Sep 10 2000 - Jul 25 2004

Greece

BSC :: Computer Science

Publications

Fotis A Baltoumas, Evangelos Karatzas, Sirui Liu, Sergey Ovchinnikov, Yorgos Sofianatos, I-Min A Chen, Nikos C Kyrpides, Georgios A Pavlopoulos
NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes. Nucleic acids research (2023)
Maria Kokoli, Evangelos Karatzas, Fotis A Baltoumas, Reinhard Schneider, Evangelos Pafilis, Savvas Paragkamian, Nadezhda Tsankova Doncheva, Lars Juhl Jensen, Georgios A Pavlopoulos
Arena3D web : interactive 3D visualization of multilayered networks supporting multiple directional information channels, clustering analysis and application integration. NAR genomics and bioinformatics 5 (2) (2023)
Evangelos Karatzas, Fotis A Baltoumas, Ioannis Kasionis, Despina Sanoudou, Aristides G Eliopoulos, Theodosios Theodosiou, Ioannis Iliopoulos, Georgios A Pavlopoulos
Darling: A Web Application for Detecting Disease-Related Biomedical Entity Associations with Literature Mining. Biomolecules 12 (4) (2022)
Evangelos Karatzas, Mikaela Koutrouli, Fotis A Baltoumas, Katerina Papanikolopoulou, Costas Bouyioukos, Georgios A Pavlopoulos
The network makeup artist (NORMA-2.0): distinguishing annotated groups in a network using innovative layout strategies. Bioinformatics advances 2 (1) (2022)
Garyfalia Papadaki, Panagiota Goutakoli, Ioanna Tiniakou, Joachim R Grün, Andreas Grützkau, Georgios A Pavlopoulos, Ioannis Iliopoulos, George K Bertsias, Dimitrios Boumpas, Caroline Ospelt, Boris Reizis, Prodromos Sidiropoulos, Panayotis Verginis
IL-6 Signaling Attenuates TNF-α Production by Plasmacytoid Dendritic Cells in Rheumatoid Arthritis. Journal of immunology (Baltimore, Md. : 1950) 209 (10) (2022)
Anastasios Galanis, Philippos Vardakas, Martin Reczko, Vaggelis Harokopos, Pantelis Hatzis, Efthimios M C Skoulakis, Georgios A Pavlopoulos, Solenn Patalano
Bee foraging preferences, microbiota and pathogens revealed by direct shotgun metagenomics of honey. Molecular ecology resources 22 (7) (2022)
Ismini Baltsavia, Theodosios Theodosiou, Nikolas Papanikolaou, Georgios A Pavlopoulos, Grigorios D Amoutzias, Maria Panagopoulou, Ekaterini Chatzaki, Evangelos Andreakos, Ioannis Iliopoulos
Prediction and Ranking of Biomarkers Using multiple UniReD. International journal of molecular sciences 23 (19) (2022)
Haris Zafeiropoulos, Savvas Paragkamian, Stelios Ninidakis, Georgios A Pavlopoulos, Lars Juhl Jensen, Evangelos Pafilis
PREGO: A Literature and Data-Mining Resource to Associate Microorganisms, Biological Processes, and Environment Types. Microorganisms 10 (2) (2022)
Evangelos Karatzas, Mikaela Koutrouli, Fotis A Baltoumas, Katerina Papanikolopoulou, Costas Bouyioukos, Georgios A Pavlopoulos
The network makeup artist (NORMA-2.0): distinguishing annotated groups in a network using innovative layout strategies. Bioinformatics advances 2 (1) (2022)
Fotis A Baltoumas, Sofia Zafeiropoulou, Evangelos Karatzas, Savvas Paragkamian, Foteini Thanati, Ioannis Iliopoulos, Aristides G Eliopoulos, Reinhard Schneider, Lars Juhl Jensen, Evangelos Pafilis, Georgios A Pavlopoulos
OnTheFly2.0: a text-mining web application for automated biomedical entity recognition, document annotation, network and functional enrichment analysis. NAR genomics and bioinformatics 3 (4) (2021)
Foteini Thanati, Evangelos Karatzas, Fotis A Baltoumas, Dimitrios J Stravopodis, Aristides G Eliopoulos, Georgios A Pavlopoulos
FLAME: A Web Tool for Functional and Literature Enrichment Analysis of Multiple Gene Lists. Biology 10 (7) (2021)
Evangelos Karatzas, Fotis A Baltoumas, Nikolaos A Panayiotou, Reinhard Schneider, Georgios A Pavlopoulos
Arena3Dweb: interactive 3D visualization of multilayered networks. Nucleic acids research 49 (W1) (2021)
Fotis A Baltoumas, Sofia Zafeiropoulou, Evangelos Karatzas, Mikaela Koutrouli, Foteini Thanati, Kleanthi Voutsadaki, Maria Gkonta, Joana Hotova, Ioannis Kasionis, Pantelis Hatzis, Georgios A Pavlopoulos
Biomolecule and Bioentity Interaction Databases in Systems Biology: A Comprehensive Review. Biomolecules 11 (8) (2021)
Connor J Cooper, Kaiyuan Zheng, Katherine W Rush, Alexander Johs, Brian C Sanders, Georgios A Pavlopoulos, Nikos C Kyrpides, Mircea Podar, Sergey Ovchinnikov, Stephen W Ragsdale, Jerry M Parks
Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation. Communications biology 3 (1) (2020)
Theodosios Theodosiou, Nikolaos Papanikolaou, Maria Savvaki, Giulia Bonetto, Stella Maxouri, Eirini Fakoureli, Aristides G Eliopoulos, Nektarios Tavernarakis, Grigorios D Amoutzias, Georgios A Pavlopoulos, Michalis Aivaliotis, Vasiliki Nikoletopoulou, Dimitris Tzamarias, Domna Karagogeos, Ioannis Iliopoulos
UniProt-Related Documents (UniReD): assisting wet lab biologists in their quest on finding novel counterparts in a protein network. NAR genomics and bioinformatics 2 (1) (2020)
Georgios A Pavlopoulos, David Paez-Espino, Nikos C Kyrpides, Ioannis Iliopoulos
Empirical Comparison of Visualization Tools for Larger-Scale Network Analysis. Advances in bioinformatics 2017 (2017)
Supratim Mukherjee, Rekha Seshadri, Neha J Varghese, Emiley A Eloe-Fadrosh, Jan P Meier-Kolthoff, Markus Göker, R Cameron Coates, Michalis Hadjithomas, Georgios A Pavlopoulos, A David Páez-Espino, Yasuo Yoshikuni, Axel Visel, William B Whitman, George M Garrity, Jonathan A Eisen, Philip Hugenholtz, Amrita Pati, Natalia N Ivanova, Tanja Woyke, Hans-Peter Klenk, Nikos C Kyrpides
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. Nature biotechnology 35 (7) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Georgios A Pavlopoulos