Tanja Woyke (T Woyke)

Loop profile ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 67

Top Venues

Microbiology resource announcements

The ISME journal

Nature communications

Scientific data

U.S. Department of Energy Joint Genome Institute

This page only lists publications with an associated author ORCID identifier.

Affiliation History

U.S. Department of Energy Joint Genome Institute

United States

Scientist

Publications

Matthew G Miyada, Yuran Choi, Ramunas Stepanauskas, Tanja Woyke, James J La Clair, Michael D Burkart
Fluorometric Analysis of Carrier-Protein-Dependent Biosynthesis through a Conformationally Sensitive Solvatochromic Pantetheinamide Probe. ACS chemical biology (2024)
Rasmus O Jensen, Frederik Schulz, Simon Roux, Dawn M Klingeman, Wayne P Mitchell, Daniel Udwary, Sarah Moraïs, Vinicio Reynoso, James Winkler, Shilpa Nagaraju, Sashini De Tissera, Nicole Shapiro, Natalia N Ivanova, T B K Reddy, Itzhak Mizrahi, Sagar M Utturkar, Edward A Bayer, Tanja Woyke, Nigel J Mouncey, Michael C Jewett, Séan D Simpson, Michael Koepke, David T Jones, Steven D Brown
Phylogenomics and genetic analysis of solvent-producing Clostridium species. Scientific data 11 (1) (2024)
Matthew G Miyada, Yuran Choi, Ramunas Stepanauskas, Tanja Woyke, James J La Clair, Michael D Burkart
Fluorometric Analysis of Carrier-Protein-Dependent Biosynthesis through a Conformationally Sensitive Solvatochromic Pantetheinamide Probe. ACS chemical biology 19 (7) (2024)
Rasmus O Jensen, Frederik Schulz, Simon Roux, Dawn M Klingeman, Wayne P Mitchell, Daniel Udwary, Sarah Moraïs, Vinicio Reynoso, James Winkler, Shilpa Nagaraju, Sashini De Tissera, Nicole Shapiro, Natalia N Ivanova, T B K Reddy, Itzhak Mizrahi, Sagar M Utturkar, Edward A Bayer, Tanja Woyke, Nigel J Mouncey, Michael C Jewett, Séan D Simpson, Michael Koepke, David T Jones, Steven D Brown
Phylogenomics and genetic analysis of solvent-producing Clostridium species. Scientific data 11 (1) (2024)
Rasmus O Jensen, Frederik Schulz, Simon Roux, Dawn M Klingeman, Wayne P Mitchell, Daniel Udwary, Sarah Moraïs, Vinicio Reynoso, James Winkler, Shilpa Nagaraju, Sashini De Tissera, Nicole Shapiro, Natalia N Ivanova, T B K Reddy, Itzhak Mizrahi, Sagar M Utturkar, Edward A Bayer, Tanja Woyke, Nigel J Mouncey, Michael C Jewett, Séan D Simpson, Michael Koepke, David T Jones, Steven D Brown
Phylogenomics and genetic analysis of solvent-producing Clostridium species. Scientific data 11 (1) (2024)
Tiffany Oliver, Neha Varghese, Simon Roux, Frederik Schulz, Marcel Huntemann, Alicia Clum, Brian Foster, Bryce Foster, Robert Riley, Kurt LaButti, Robert Egan, Patrick Hajek, Supratim Mukherjee, Galina Ovchinnikova, T B K Reddy, Sara Calhoun, Richard D Hayes, Robin R Rohwer, Zhichao Zhou, Christopher Daum, Alex Copeland, I-Min A Chen, Natalia N Ivanova, Nikos C Kyrpides, Nigel J Mouncey, Tijana Glavina Del Rio, Igor V Grigoriev, Steven Hofmeyr, Leonid Oliker, Katherine Yelick, Karthik Anantharaman, Katherine D McMahon, Tanja Woyke, Emiley A Eloe-Fadrosh
Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota. Scientific data 11 (1) (2024)
Ananda S Bhattacharjee, Frederik Schulz, Tanja Woyke, Beth N Orcutt, Joaquín Martínez Martínez
Genomics discovery of giant fungal viruses from subsurface oceanic crustal fluids. ISME communications 3 (1) (2023)
Marike Palmer, Jonathan K Covington, En-Min Zhou, Scott C Thomas, Neeli Habib, Cale O Seymour, Dengxun Lai, Juliet Johnston, Ameena Hashimi, Jian-Yu Jiao, Alise R Muok, Lan Liu, Wen-Dong Xian, Xiao-Yang Zhi, Meng-Meng Li, Leslie P Silva, Benjamin P Bowen, Katherine Louie, Ariane Briegel, Jennifer Pett-Ridge, Peter K Weber, Elitza I Tocheva, Tanja Woyke, Trent R Northen, Xavier Mayali, Wen-Jun Li, Brian P Hedlund
Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past. The ISME journal (2023)
Cale O Seymour, Marike Palmer, Eric D Becraft, Ramunas Stepanauskas, Ariel D Friel, Frederik Schulz, Tanja Woyke, Emiley A Eloe-Fadrosh, Dengxun Lai, Jian-Yu Jiao, Zheng-Shuang Hua, Lan Liu, Zheng-Han Lian, Wen-Jun Li, Maria Chuvochina, Brianna K Finley, Benjamin J Koch, Egbert Schwartz, Paul Dijkstra, Duane P Moser, Bruce A Hungate, Brian P Hedlund
Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota. Nature microbiology (2023)
Ananda S Bhattacharjee, Frederik Schulz, Tanja Woyke, Beth N Orcutt, Joaquín Martínez Martínez
Genomics discovery of giant fungal viruses from subsurface oceanic crustal fluids. ISME communications 3 (1) (2023)
Ananda S Bhattacharjee, Frederik Schulz, Tanja Woyke, Beth N Orcutt, Joaquín Martínez Martínez
Genomics discovery of giant fungal viruses from subsurface oceanic crustal fluids. ISME communications 3 (1) (2023)
Tanja Woyke
Cell by cell: population genetics in the wild. Nature reviews. Genetics (2023)
Antonio Pedro Camargo, Lee Call, Simon Roux, Stephen Nayfach, Marcel Huntemann, Krishnaveni Palaniappan, Anna Ratner, Ken Chu, Supratim Mukherjee, T B K Reddy, I-Min A Chen, Natalia N Ivanova, Emiley A Eloe-Fadrosh, Tanja Woyke, David A Baltrus, Salvador Castañeda-Barba, María de Toro, Barbara E Funnell, James P J Hall, Aindrila Mukhopadhyay, Eduardo P C Rocha, Thibault Stalder, Eva M Top, Nikos C Kyrpides
IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata. Nucleic acids research (2023)
Julia Anstett, Alvaro M Plominsky, Edward F DeLong, Alyse Kiesser, Klaus Jürgens, Connor Morgan-Lang, Ramunas Stepanauskas, Frank J Stewart, Osvaldo Ulloa, Tanja Woyke, Rex R Malmstrom, Steven James Hallam
A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters. Scientific data 10 (1) (2023)
Igor Brown, Tanja Woyke, Natalia Ivanova, Nicole Shapiro, Jaime Alcorta, Andrei Chistoserdov, Donald Pan, Svetlana Sarkisova, Susannah G Tringe
High-Quality Draft Genome Sequence of Fischerella thermalis JSC-11, a Siderophilic Cyanobacterium with Bioremediation Potential. Microbiology resource announcements 11 (11) (2022)
Joana Fernandes Couceiro, Tina Keller-Costa, Nikos C Kyrpides, Tanja Woyke, William B Whitman, Rodrigo Costa
Genome Sequencing Suggests Diverse Secondary Metabolism in Coral-Associated Aquimarina megaterium. Microbiology resource announcements 11 (11) (2022)
Hang Yu, Daan R Speth, Stephanie A Connon, Danielle Goudeau, Rex R Malmstrom, Tanja Woyke, Victoria J Orphan
Community Structure and Microbial Associations in Sediment-Free Methanotrophic Enrichment Cultures from a Marine Methane Seep. Applied and environmental microbiology 88 (11) (2022)
Jiarui Sun, Paul N Evans, Emma J Gagen, Benjamin J Woodcroft, Brian P Hedlund, Tanja Woyke, Philip Hugenholtz, Christian Rinke
Correction: Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota. ISME communications 2 (1) (2022)
Grayson L Chadwick, Connor T Skennerton, Rafael Laso-Pérez, Andy O Leu, Daan R Speth, Hang Yu, Connor Morgan-Lang, Roland Hatzenpichler, Danielle Goudeau, Rex R Malmstrom, William J Brazelton, Tanja Woyke, Steven James Hallam, Gene W Tyson, Gunter Wegener, Antje Boetius, Victoria J Orphan
Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea. PLoS biology 20 (1) (2022)
George Colin diCenzo, Lisa Cangioli, Quentin Nicoud, Janis H T Cheng, Matthew J Blow, Nicole Shapiro, Tanja Woyke, Emanuele G Biondi, Benoit Alunni, Alessio Mengoni, Peter Mergaert
DNA Methylation in Ensifer Species during Free-Living Growth and during Nitrogen-Fixing Symbiosis with Medicago spp. mSystems 7 (1) (2022)
Jean-Marie Volland, Silvina Gonzalez-Rizzo, Olivier Gros, Tomáš Tyml, Natalia N Ivanova, Frederik Schulz, Danielle Goudeau, Nathalie H Elisabeth, Nandita Nath, Daniel W Udwary, Rex R Malmstrom, Chantal Guidi-Rontani, Susanne Bolte-Kluge, Karen M Davies, Maïtena R Jean, Jean-Louis Mansot, Nigel J Mouncey, Esther R Angert, Tanja Woyke, Shailesh V Date
A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles. Science (New York, N.Y.) 376 (6600) (2022)
Cristina Howard-Varona, Simon Roux, Benjamin P Bowen, Leslie P Silva, Rebecca K Lau, Sarah M Schwenck, Samuel Schwartz, Tanja Woyke, Trent R Northen, Matthew B Sullivan, Sheri A Floge
Protist impacts on marine cyanovirocell metabolism. ISME communications 2 (1) (2022)
Frederik Schulz, Chantal Abergel, Tanja Woyke
Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature reviews. Microbiology 20 (12) (2022)
Nicholas J Reichart, Robert M Bowers, Tanja Woyke, Roland Hatzenpichler
Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park. Microbiology resource announcements 11 (4) (2022)
Gina Chaput, Jacob Ford, Lani DeDiego, Achala Narayanan, Wing Yin Tam, Meghan Whalen, Marcel Huntemann, Alicia Clum, Alex Spunde, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, I-Min Chen, Dimitrios Stamatis, T B K Reddy, Ronan O'Malley, Chris Daum, Nicole Shapiro, Natalia Ivanova, Nikos C Kyrpides, Tanja Woyke, Tijana Glavina Del Rio, Kristen M DeAngelis
Sodalis ligni Strain 159R Isolated from an Anaerobic Lignin-Degrading Consortium. Microbiology spectrum 10 (3) (2022)
Markus Sutter, Matthew R Melnicki, Frederik Schulz, Tanja Woyke, Cheryl A Kerfeld
A catalog of the diversity and ubiquity of bacterial microcompartments. Nature communications 12 (1) (2021)
Cassandra R Harris, Denise M Akob, Maria Fabisch, Felix Beulig, Tanja Woyke, Nicole Shapiro, Alla Lapidus, Hans-Peter Klenk, Kirsten Küsel
Draft Genome Sequence of Bordetella sp. Strain FB-8, Isolated from a Former Uranium Mining Area in Germany. Microbiology resource announcements 10 (14) (2021)
Robert M Bowers, Stephen Nayfach, Frederik Schulz, Sean P Jungbluth, Ilona A Ruhl, Andriy Sheremet, Janey Lee, Danielle Goudeau, Emiley A Eloe-Fadrosh, Ramunas Stepanauskas, Rex R Malmstrom, Nikos C Kyrpides, Peter F Dunfield, Tanja Woyke
Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution. The ISME journal 16 (5) (2021)
Esther Singer, Elizabeth M Carpenter, Jason Bonnette, Tanja Woyke, Thomas E Juenger
Impact of Harvest on Switchgrass Leaf Microbial Communities. Genes 13 (1) (2021)
Magdalena M Felczak, Robert M Bowers, Tanja Woyke, Michaela A TerAvest
Zymomonas diversity and potential for biofuel production. Biotechnology for biofuels 14 (1) (2021)
Chelsea L Murphy, Andriy Sheremet, Peter F Dunfield, John R Spear, Ramunas Stepanauskas, Tanja Woyke, Mostafa S Elshahed, Noha H Youssef
Genomic Analysis of the Yet-Uncultured Binatota Reveals Broad Methylotrophic, Alkane-Degradation, and Pigment Production Capacities. mBio 12 (3) (2021)
Janina Rahlff, Victoria Turzynski, Sarah P Esser, Indra Monsees, Till L V Bornemann, Perla Abigail Figueroa-Gonzalez, Frederik Schulz, Tanja Woyke, Andreas Klingl, Cristina Moraru, Alexander J Probst
Lytic archaeal viruses infect abundant primary producers in Earth's crust. Nature communications 12 (1) (2021)
Olga A Lastovetsky, Lev D Krasnovsky, Xiaotian Qin, Maria L Gaspar, Andrii P Gryganskyi, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T B K Reddy, Chris Daum, Nicole Shapiro, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Teresa E Pawlowska
Molecular Dialogues between Early Divergent Fungi and Bacteria in an Antagonism versus a Mutualism. mBio 11 (5) (2020)
Stephanie A Eichorst, Daniela Trojan, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T B K Reddy, Chris Daum, Lynne A Goodwin, Nicole Shapiro, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Dagmar Woebken
One Complete and Seven Draft Genome Sequences of Subdivision 1 and 3 Acidobacteria Isolated from Soil. Microbiology resource announcements 9 (5) (2020)
Yui Sato, Juliane Wippler, Cecilia Wentrup, Tanja Woyke, Nicole Dubilier, Manuel Kleiner
High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis. Microbiology resource announcements 9 (31) (2020)
Desiree J Meyers, Brittany A Leigh, Marcel Huntemann, Alicia Clum, Stephan Ritter, Krishnaveni Palaniappan, I-Min Chen, Dimitrios Stamatis, T B K Reddy, Ronan O'Malley, Chris Daum, Nicole Shapiro, Natalia Ivanova, Nikos C Kyrpides, Tanja Woyke, William B Whitman
Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug. Microbiology resource announcements 9 (15) (2020)
Stephen Nayfach, Simon Roux, Rekha Seshadri, Daniel W Udwary, Neha Varghese, Frederik Schulz, Dongying Wu, A David Páez-Espino, I-Min A Chen, Marcel Huntemann, Krishna Palaniappan, Joshua Ladau, Supratim Mukherjee, T B K Reddy, Torben Nielsen, Edward Kirton, José P Faria, Janaka N Edirisinghe, Christopher S Henry, Sean P Jungbluth, Dylan Chivian, Paramvir Dehal, Elisha M Wood-Charlson, Adam P Arkin, Susannah G Tringe, Axel Visel, null null, Tanja Woyke, Nigel J Mouncey, Natalia N Ivanova, Nikos C Kyrpides, Emiley A Eloe-Fadrosh
Publisher Correction: A genomic catalog of Earth's microbiomes. Nature biotechnology (2020)
L V Alteio, Frederik Schulz, R Seshadri, N Varghese, W Rodriguez-Reillo, E Ryan, D Goudeau, Stephanie A Eichorst, R R Malmstrom, R M Bowers, Laura A Katz, J L Blanchard, Tanja Woyke
Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil. mSystems 5 (2) (2020)
Jessica K Jarett, Mária Džunková, Frederik Schulz, Simon Roux, A David Páez-Espino, Emiley A Eloe-Fadrosh, Sean P Jungbluth, Natalia N Ivanova, John R Spear, Stephanie A Carr, Christopher B Trivedi, Frank A Corsetti, Hope A Johnson, Eric Becraft, Nikos C Kyrpides, Ramunas Stepanauskas, Tanja Woyke
Insights into the dynamics between viruses and their hosts in a hot spring microbial mat. The ISME journal 14 (10) (2020)
Alexander J Probst, Felix J Elling, Cindy J Castelle, Qingzeng Zhu, Marcus Elvert, Giovanni Birarda, Hoi-Ying N Holman, Katherine R Lane, Bethany Ladd, M Cathryn Ryan, Tanja Woyke, Kai-Uwe Hinrichs, Jillian F Banfield
Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria. The ISME journal 14 (6) (2020)
Andriy Sheremet, Gareth M Jones, Jessica K Jarett, Robert M Bowers, Isaac Bedard, Cassandra Culham, Emiley A Eloe-Fadrosh, Natalia N Ivanova, Rex R Malmstrom, Stephen E Grasby, Tanja Woyke, Peter F Dunfield
Ecological and genomic analyses of candidate phylum WPS-2 bacteria in an unvegetated soil. Environmental microbiology 22 (8) (2020)
Erin E Nuccio, Evan Starr, Ulas Karaoz, Eoin L Brodie, Jizhong Zhou, Susannah G Tringe, Rex R Malmstrom, Tanja Woyke, Jillian F Banfield, Mary K Firestone, Jennifer Pett-Ridge
Niche differentiation is spatially and temporally regulated in the rhizosphere. The ISME journal 14 (4) (2020)
Stephen Nayfach, Simon Roux, Rekha Seshadri, Daniel W Udwary, Neha Varghese, Frederik Schulz, Dongying Wu, A David Páez-Espino, I-Min A Chen, Marcel Huntemann, Krishna Palaniappan, Joshua Ladau, Supratim Mukherjee, T B K Reddy, Torben Nielsen, Edward Kirton, José P Faria, Janaka N Edirisinghe, Christopher S Henry, Sean P Jungbluth, Dylan Chivian, Paramvir Dehal, Elisha M Wood-Charlson, Adam P Arkin, Susannah G Tringe, Axel Visel, null null, Tanja Woyke, Nigel J Mouncey, Natalia N Ivanova, Nikos C Kyrpides, Emiley A Eloe-Fadrosh
A genomic catalog of Earth's microbiomes. Nature biotechnology 39 (4) (2020)
Frederik Schulz, Julien Andreani, Rania Francis, Hadjer Boudjemaa, Jacques Yaacoub Bou Khalil, Janey Lee, Bernard La Scola, Tanja Woyke
Advantages and Limits of Metagenomic Assembly and Binning of a Giant Virus. mSystems 5 (3) (2020)
Denise M Akob, Michelle Hallenbeck, Felix Beulig, Maria Fabisch, Kirsten Küsel, Jessica L Keffer, Tanja Woyke, Nicole Shapiro, Alla Lapidus, Hans-Peter Klenk, Clara S Chan
Mixotrophic Iron-Oxidizing Thiomonas Isolates from an Acid Mine Drainage-Affected Creek. Applied and environmental microbiology 86 (24) (2020)
Arantxa Peña, Antonio Busquets, Margarita Gomila, Magdalena Mulet, Rosa M Gomila, Elena Garcia-Valdes, T B K Reddy, Marcel Huntemann, Neha Varghese, Natalia Ivanova, I-Min Chen, Markus Göker, Tanja Woyke, Hans-Peter Klenk, Nikos Kyrpides, Jorge Lalucat
High-quality draft genome sequences of Pseudomonas monteilii DSM 14164T, Pseudomonas mosselii DSM 17497T, Pseudomonas plecoglossicida DSM 15088T, Pseudomonas taiwanensis DSM 21245T and Pseudomonas vranovensis DSM 16006T: taxonomic considerations. Access microbiology 1 (10) (2019)
Paula B Matheus Carnevali, Frederik Schulz, Cindy J Castelle, Rose S Kantor, Patrick M Shih, Itai Sharon, Joanne M Santini, Matthew R Olm, Yuki Amano, Brian C Thomas, Karthik Anantharaman, David Burstein, Eric D Becraft, Ramunas Stepanauskas, Tanja Woyke, Jillian F Banfield
Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria. Nature communications 10 (1) (2019)
Devin F R Doud, Robert M Bowers, Frederik Schulz, Markus De Raad, Kai Deng, Angela Tarver, Evan Glasgow, Kirk Vander Meulen, Brian Fox, Sam Deutsch, Yasuo Yoshikuni, Trent R Northen, Brian P Hedlund, Steven W Singer, Natalia N Ivanova, Tanja Woyke
Function-driven single-cell genomics uncovers cellulose-degrading bacteria from the rare biosphere. The ISME journal 14 (3) (2019)
Fauziah F Rochman, Miye Kwon, Roshan Khadka, Ivica Tamas, Azriel Abraham Lopez-Jauregui, Andriy Sheremet, Angela V Smirnova, Rex R Malmstrom, Sukhwan Yoon, Tanja Woyke, Peter F Dunfield, Tobin J Verbeke
Novel copper-containing membrane monooxygenases (CuMMOs) encoded by alkane-utilizing Betaproteobacteria. The ISME journal 14 (3) (2019)
Simon Roux, Mart Krupovic, Rebecca A Daly, Adair L Borges, Stephen Nayfach, Frederik Schulz, Allison Sharrar, Paula B Matheus Carnevali, Jan-Fang Cheng, Natalia N Ivanova, Joseph Bondy-Denomy, Kelly C Wrighton, Tanja Woyke, Axel Visel, Nikos C Kyrpides, Emiley A Eloe-Fadrosh
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes. Nature microbiology 4 (11) (2019)
Paula B Matheus Carnevali, Frederik Schulz, Cindy J Castelle, Rose S Kantor, Patrick M Shih, Itai Sharon, Joanne M Santini, Matthew R Olm, Yuki Amano, Brian C Thomas, Karthik Anantharaman, David Burstein, Eric D Becraft, Ramunas Stepanauskas, Tanja Woyke, Jillian F Banfield
Author Correction: Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria. Nature communications 10 (1) (2019)
Volkan Sevim, Juna Lee, Robert Egan, Alicia Clum, Hope Hundley, Janey Lee, R Craig Everroad, Angela M Detweiler, Brad M Bebout, Jennifer Pett-Ridge, Markus Göker, Alison E Murray, Stephen R Lindemann, Hans-Peter Klenk, Ronan O'Malley, Matthew Zane, Jan-Fang Cheng, Alex Copeland, Christopher Daum, Esther Singer, Tanja Woyke
Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies. Scientific data 6 (1) (2019)
Bojk A Berghuis, Feiqiao Brian Yu, Frederik Schulz, Paul C Blainey, Tanja Woyke, Stephen R Quake
Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens. Proceedings of the National Academy of Sciences of the United States of America 116 (11) (2019)
Simon Roux, Evelien M Adriaenssens, Bas E Dutilh, Eugene V Koonin, Andrew M Kropinski, Mart Krupovic, Jens H Kuhn, Rob Lavigne, J Rodney Brister, Darren P Martin, Clara Amid, Ramy K Aziz, Seth R Bordenstein, Peer Bork, Mya Breitbart, Guy R Cochrane, Rebecca A Daly, Christelle Desnues, Melissa B Duhaime, Joanne B Emerson, François Enault, Jed A Fuhrman, Pascal Hingamp, Philip Hugenholtz, Bonnie L Hurwitz, Natalia N Ivanova, Jessica M Labonté, Kyung-Bum Lee, Rex R Malmstrom, Manuel Martinez-Garcia, Ilene Karsch Mizrachi, Hiroyuki Ogata, A David Páez-Espino, Marie-Agnès Petit, Catherine Putonti, Thomas Rattei, Alejandro Reyes, Francisco Rodriguez-Valera, Karyna Rosario, Lynn Schriml, Frederik Schulz, Grieg F Steward, Matthew B Sullivan, Shinichi Sunagawa, Curtis A Suttle, Ben Temperton, Susannah G Tringe, Rebecca Vega Thurber, Nicole Suzanne Webster, Katrine L Whiteson, Steven W Wilhelm, K Eric Wommack, Tanja Woyke, Kelly C Wrighton, Pelin Yilmaz, Takashi Yoshida, Mark J Young, Natalya Yutin, Lisa Zeigler Allen, Nikos C Kyrpides, Emiley A Eloe-Fadrosh
Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature biotechnology 37 (1) (2018)
Rekha Seshadri, Sinead C Leahy, Graeme T Attwood, Koon Hoong Teh, Suzanne C Lambie, Adrian L Cookson, Emiley A Eloe-Fadrosh, Georgios A Pavlopoulos, Michalis Hadjithomas, Neha J Varghese, A David Páez-Espino, null null, Rechelle Perry, Gemma Henderson, Christopher J Creevey, Nicolas Terrapon, Pascal Lapebie, Elodie Drula, Vincent Lombard, Edward Rubin, Nikos C Kyrpides, Bernard Henrissat, Tanja Woyke, Natalia N Ivanova, William J Kelly
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature biotechnology 36 (4) (2018)
Steven R Ahrendt, C Alisha Quandt, Doina Ciobanu, Alicia Clum, Asaf Salamov, Bill Andreopoulos, Jan-Fang Cheng, Tanja Woyke, Adrian Pelin, Bernard Henrissat, Nicole K Reynolds, Gerald L Benny, Matthew E Smith, Timothy Y James, Igor V Grigoriev
Leveraging single-cell genomics to expand the fungal tree of life. Nature microbiology 3 (12) (2018)
Frederik Schulz, Lauren Alteio, Danielle Goudeau, Elizabeth M Ryan, Feiqiao B Yu, Rex R Malmstrom, Jeffrey Blanchard, Tanja Woyke
Hidden diversity of soil giant viruses. Nature communications 9 (1) (2018)
Alexander J Probst, Bethany Ladd, Jessica K Jarett, David E Geller-McGrath, Christian M K Sieber, Joanne B Emerson, Karthik Anantharaman, Brian C Thomas, Rex R Malmstrom, Michaela Stieglmeier, Andreas Klingl, Tanja Woyke, M Cathryn Ryan, Jillian F Banfield
Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface. Nature microbiology 3 (3) (2018)
Jessica K Jarett, Stephen Nayfach, Mircea Podar, William Inskeep, Natalia N Ivanova, Jacob Munson-McGee, Frederik Schulz, Mark Young, Zackary J Jay, Jacob P Beam, Nikos C Kyrpides, Rex R Malmstrom, Ramunas Stepanauskas, Tanja Woyke
Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis. Microbiome 6 (1) (2018)
Lorena Carro, Imen Nouioui, Vartul Sangal, Jan P Meier-Kolthoff, Martha E Trujillo, Maria Del Carmen Montero-Calasanz, Nevzat Sahin, Darren Lee Smith, Kristi E Kim, Paul Peluso, Shweta Deshpande, Tanja Woyke, Nicole Shapiro, Nikos C Kyrpides, Hans-Peter Klenk, Markus Göker, Michael Goodfellow
Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential. Scientific reports 8 (1) (2018)
Sarah Kopac, Hannah Beatty, Philip Gialopsos, Marcel Huntemann, Alicia Clum, Alexander Spunde, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T B K Reddy, Chris Daum, Vivian Ng, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Jonathan L Klassen
High-Quality Draft Genome Sequences of Eight Bacteria Isolated from Fungus Gardens Grown by Trachymyrmex septentrionalis Ants. Microbiology resource announcements 7 (2) (2018)
Maria G Pachiadaki, Eva Sintes, Kristin Bergauer, Julia M Brown, Nicholas R Record, Brandon K Swan, Mary Elizabeth Mathyer, Steven James Hallam, Purificacion Lopez-Garcia, Yoshihiro Takaki, Takuro Nunoura, Tanja Woyke, Gerhard J Herndl, Ramunas Stepanauskas
Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation. Science (New York, N.Y.) 358 (6366) (2018)
Frederik Schulz, Natalya Yutin, Natalia N Ivanova, Davi R Ortega, Tae Kwon Lee, Julia Vierheilig, Holger Daims, Matthias Horn, Michael Wagner, George J Lu, Nikos C Kyrpides, Eugene V Koonin, Tanja Woyke
Giant viruses with an expanded complement of translation system components. Science (New York, N.Y.) 356 (6333) (2017)
Tanja Woyke, Devin F R Doud, Frederik Schulz
The trajectory of microbial single-cell sequencing. Nature methods 14 (11) (2017)
Alyse K Hawley, Masaru K Nobu, Jody J Wright, W Evan Durno, Connor Morgan-Lang, Brent Sage, Patrick Schwientek, Brandon K Swan, Christian Rinke, Monica Torres-Beltrán, Keith Mewis, Wen-Tso Liu, Ramunas Stepanauskas, Tanja Woyke, Steven James Hallam
Diverse Marinimicrobia bacteria may mediate coupled biogeochemical cycles along eco-thermodynamic gradients. Nature communications 8 (1) (2017)
Feiqiao Brian Yu, Paul C Blainey, Frederik Schulz, Tanja Woyke, Mark A Horowitz, Stephen R Quake
Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples. eLife 6 (2017)
Asaf Levy, Isai Salas Gonzalez, Maximilian Mittelviefhaus, Scott Clingenpeel, Sur Herrera Paredes, Jiamin Miao, Kunru Wang, Giulia Devescovi, Kyra Stillman, Freddy Monteiro, Bryan Rangel Alvarez, Derek S Lundberg, Tse-Yuan Lu, Sarah Lebeis, Zhao Jin, Meredith McDonald, Andrew P Klein, Meghan E Feltcher, Tijana Glavina Rio, Sarah R Grant, Sharon Lafferty Doty, Ruth E Ley, Bingyu Zhao, Vittorio Venturi, Dale A Pelletier, Julia A Vorholt, Susannah G Tringe, Tanja Woyke, Jeffery L Dangl
Genomic features of bacterial adaptation to plants. Nature genetics 50 (1) (2017)

Tanja Woyke.css-eqlu8i{font-size:small;padding-left:4px;} (T Woyke)

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Tanja Woyke (T Woyke)