Jean-Marc Schwartz

Scopus Author ID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 33

Top Topics

Machine Learning

Dna Methylation

Sentinel Lymph Node

Top Venues

NPJ systems biology and applications

Nature communications

BMC bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Yusuke Tokuhara, Tatsuya Akutsu, Jean-Marc Schwartz, Jose C Nacher
A practically efficient algorithm for identifying critical control proteins in directed probabilistic biological networks. NPJ systems biology and applications 10 (1) (2024)
Wataru Someya, Tatsuya Akutsu, Jean-Marc Schwartz, Jose C Nacher
Measuring criticality in control of complex biological networks. NPJ systems biology and applications 10 (1) (2024)
Wataru Someya, Tatsuya Akutsu, Jean-Marc Schwartz, Jose C Nacher
Measuring criticality in control of complex biological networks. NPJ systems biology and applications 10 (1) (2024)
Soukaina Timouma, Laura Natalia Balarezo-Cisneros, Jean-Marc Schwartz, Daniela Delneri
Development of a genome-scale metabolic model for the lager hybrid yeast S. pastorianus to understand the evolution of metabolic pathways in industrial settings. mSystems 9 (6) (2024)
Soukaina Timouma, Laura Natalia Balarezo-Cisneros, Jean-Marc Schwartz, Daniela Delneri
Development of a genome-scale metabolic model for the lager hybrid yeast S. pastorianus to understand the evolution of metabolic pathways in industrial settings. mSystems (2024)
Soukaina Timouma, Laura Natalia Balarezo-Cisneros, Jean-Marc Schwartz, Daniela Delneri
Development of a genome-scale metabolic model for the lager hybrid yeast S. pastorianus to understand the evolution of metabolic pathways in industrial settings. mSystems 9 (6) (2024)
Kate E Meeson, Jean-Marc Schwartz
Constraint-based modelling predicts metabolic signatures of low and high-grade serous ovarian cancer. NPJ systems biology and applications 10 (1) (2024)
Soukaina Timouma, Laura Natalia Balarezo-Cisneros, Jean-Marc Schwartz, Daniela Delneri
Development of a genome-scale metabolic model for the lager hybrid yeast S. pastorianus to understand the evolution of metabolic pathways in industrial settings. mSystems 9 (6) (2024)
Kate E Meeson, Jean-Marc Schwartz
Constraint-based modelling predicts metabolic signatures of low and high-grade serous ovarian cancer. NPJ systems biology and applications 10 (1) (2024)
Wataru Someya, Tatsuya Akutsu, Jean-Marc Schwartz, Jose C Nacher
Measuring criticality in control of complex biological networks. NPJ systems biology and applications 10 (1) (2024)
Yusuke Tokuhara, Tatsuya Akutsu, Jean-Marc Schwartz, Jose C Nacher
A practically efficient algorithm for identifying critical control proteins in directed probabilistic biological networks. NPJ systems biology and applications 10 (1) (2024)
Yusuke Tokuhara, Tatsuya Akutsu, Jean-Marc Schwartz, Jose C Nacher
A practically efficient algorithm for identifying critical control proteins in directed probabilistic biological networks. NPJ systems biology and applications 10 (1) (2024)
Soukaina Timouma, Laura Natalia Balarezo-Cisneros, Jean-Marc Schwartz, Daniela Delneri
Development of a genome-scale metabolic model for the lager hybrid yeast S. pastorianus to understand the evolution of metabolic pathways in industrial settings. mSystems 9 (6) (2024)
Olga Valenzuela, Francisco M Ortuño, Alfredo Benso, Jean-Marc Schwartz, Alexandre G De Brevern, Ignacio Rojas
Special Issue: New Advances in Bioinformatics and Biomedical Engineering Using Machine Learning Techniques, IWBBIO-2022. Genes 14 (8) (2023)
Ömer F Bay, Kelly S Hayes, Jean-Marc Schwartz, Richard K Grencis, Ian S Roberts
A genome-scale metabolic model of parasitic whipworm. Nature communications 14 (1) (2023)
Liliane Mpabanzi, Jessica Wainwright, Bas Boonen, Hans van Eijk, Dipok Dhar, Esther Karssemeijer, Cees H C Dejong, Rajiv Jalan, Jean-Marc Schwartz, Steven W M Olde Damink, Zita Soons
Fluxomics reveals cellular and molecular basis of increased renal ammoniagenesis. NPJ systems biology and applications 8 (1) (2022)
Joëlle Tchicaya-Bouanga, Yu-Jen Hung, Jean-Marc Schwartz, Diane Ji Yun Yoon, Emilie Chotard, Clarice Marty, Guillaume Anthony Odri, Gonzague de Pinieux, Martine Cohen Solal, Dominique Modrowski
A calpain-6/YAP axis in sarcoma stem cells that drives the outgrowth of tumors and metastases. Cell death & disease 13 (9) (2022)
Liliane Mpabanzi, Jessica Wainwright, Bas Boonen, Hans van Eijk, Dipok Dhar, Esther Karssemeijer, Cees H C Dejong, Rajiv Jalan, Jean-Marc Schwartz, Steven W M Olde Damink, Zita Soons
Fluxomics reveals cellular and molecular basis of increased renal ammoniagenesis. NPJ systems biology and applications 8 (1) (2022)
Liliane Mpabanzi, Jessica Wainwright, Bas Boonen, Hans van Eijk, Dipok Dhar, Esther Karssemeijer, Cees H C Dejong, Rajiv Jalan, Jean-Marc Schwartz, Steven W M Olde Damink, Zita Soons
Fluxomics reveals cellular and molecular basis of increased renal ammoniagenesis. NPJ systems biology and applications 8 (1) (2022)
Joanne Watson, Harriet R Ferguson, Rosie M Brady, Jennifer Ferguson, Paul Fullwood, Hanyi Mo, Katherine H Bexley, David Knight, Gareth Howell, Jean-Marc Schwartz, Michael P Smith, Chiara Francavilla
Spatially resolved phosphoproteomics reveals fibroblast growth factor receptor recycling-driven regulation of autophagy and survival. Nature communications 13 (1) (2022)
Liliane Mpabanzi, Jessica Wainwright, Bas Boonen, Hans van Eijk, Dipok Dhar, Esther Karssemeijer, Cees H C Dejong, Rajiv Jalan, Jean-Marc Schwartz, Steven W M Olde Damink, Zita Soons
Fluxomics reveals cellular and molecular basis of increased renal ammoniagenesis. NPJ systems biology and applications 8 (1) (2022)
Liliane Mpabanzi, Jessica Wainwright, Bas Boonen, Hans van Eijk, Dipok Dhar, Esther Karssemeijer, Cees H C Dejong, Rajiv Jalan, Jean-Marc Schwartz, Steven W M Olde Damink, Zita Soons
Fluxomics reveals cellular and molecular basis of increased renal ammoniagenesis. NPJ systems biology and applications 8 (1) (2022)
Joanne Watson, Michael Smith, Chiara Francavilla, Jean-Marc Schwartz
SubcellulaRVis: a web-based tool to simplify and visualise subcellular compartment enrichment. Nucleic acids research (2022)
Helena A Herrmann, Pablo Ignacio Calzadilla, Jean-Marc Schwartz, Giles Nicholas Johnson
Cytosolic fumarase acts as a metabolic fail-safe for both high and low temperature acclimation of Arabidopsis thaliana. Journal of experimental botany 73 (7) (2022)
Soukaina Timouma, Laura Natalia Balarezo-Cisneros, Javier Pinto, Roberto De La Cerda, Ursula Bond, Jean-Marc Schwartz, Daniela Delneri
Transcriptional Profile of the Industrial Hybrid Saccharomyces pastorianus Reveals Temperature-Dependent Allele Expression Bias and Preferential Orthologous Protein Assemblies. Molecular biology and evolution 38 (12) (2022)
Joseph H R Hetmanski, Matthew C Jones, Fatima Chunara, Jean-Marc Schwartz, Patrick T Caswell
Combinatorial mathematical modelling approaches to interrogate rear retraction dynamics in 3D cell migration. PLoS computational biology 17 (3) (2021)
Helena A Herrmann, Beth C Dyson, Matthew A E Miller, Jean-Marc Schwartz, Giles Nicholas Johnson
Metabolic flux from the chloroplast provides signals controlling photosynthetic acclimation to cold in Arabidopsis thaliana. Plant, cell & environment 44 (1) (2020)
Soukaina Timouma, Jean-Marc Schwartz, Daniela Delneri
HybridMine: A Pipeline for Allele Inheritance and Gene Copy Number Prediction in Hybrid Genomes and Its Application to Industrial Yeasts. Microorganisms 8 (10) (2020)
Vandana Ravindran, Jose C Nacher, Tatsuya Akutsu, Masayuki Ishitsuka, Adrian Osadcenco, V Sunitha, Ganesh Bagler, Jean-Marc Schwartz, David L Robertson
Network controllability analysis of intracellular signalling reveals viruses are actively controlling molecular systems. Scientific reports 9 (1) (2019)
Helena A Herrmann, Beth C Dyson, Lucy Vass, Giles Nicholas Johnson, Jean-Marc Schwartz
Flux sampling is a powerful tool to study metabolism under changing environmental conditions. NPJ systems biology and applications 5 (2019)
Jean-Marc Schwartz, Hiroaki Otokuni, Tatsuya Akutsu, Jose C Nacher
Probabilistic controllability approach to metabolic fluxes in normal and cancer tissues. Nature communications 10 (1) (2019)
Katarzyna Anna Piróg, Ella P Dennis, Claire L Hartley, Robert M Jackson, Jamie Soul, Jean-Marc Schwartz, John F Bateman, Raymond P Boot-Handford, Michael D Briggs
XBP1 signalling is essential for alleviating mutant protein aggregation in ER-stress related skeletal disease. PLoS genetics 15 (7) (2019)
Ruth Alexandra Stoney, Jean-Marc Schwartz, David L Robertson, Goran Nenadic
Using set theory to reduce redundancy in pathway sets. BMC bioinformatics 19 (1) (2018)