Jian-Feng Mao (Jianfeng Mao)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 37

Top Topics

Gene Expression

Top Venues

Scientific data

Horticulture research

Plant physiology

The New phytologist

This page only lists publications with an associated author ORCID identifier.

Publications

Xue-Chan Tian, Zhao-Yang Chen, Shuai Nie, Tian-Le Shi, Xue-Mei Yan, Yu-Tao Bao, Zhi-Chao Li, Hai-Yao Ma, Kai-Hua Jia, Wei Zhao, Jian-Feng Mao
Plant-LncPipe: a computational pipeline providing significant improvement in plant lncRNA identification. Horticulture research 11 (4) (2024)
Xue-Chan Tian, Zhao-Yang Chen, Shuai Nie, Tian-Le Shi, Xue-Mei Yan, Yu-Tao Bao, Zhi-Chao Li, Hai-Yao Ma, Kai-Hua Jia, Wei Zhao, Jian-Feng Mao
Plant-LncPipe: a computational pipeline providing significant improvement in plant lncRNA identification. Horticulture research 11 (4) (2024)
Tian-Le Shi, Kai-Hua Jia, Yu-Tao Bao, Shuai Nie, Xue-Chan Tian, Xue-Mei Yan, Zhao-Yang Chen, Zhi-Chao Li, Shi-Wei Zhao, Hai-Yao Ma, Ye Zhao, Xiang Li, Ren-Gang Zhang, Jing Guo, Wei Zhao, El-Kassaby Yousry, Niels A Müller, Yves Van de Peer, Xiao-Ru Wang, Nathaniel Robert Street, Ilga M Porth, Xinmin An, Jian-Feng Mao
High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar. Plant physiology 195 (1) (2024)
Tian-Le Shi, Kai-Hua Jia, Yu-Tao Bao, Shuai Nie, Xue-Chan Tian, Xue-Mei Yan, Zhao-Yang Chen, Zhi-Chao Li, Shi-Wei Zhao, Hai-Yao Ma, Ye Zhao, Xiang Li, Ren-Gang Zhang, Jing Guo, Wei Zhao, El-Kassaby Yousry, Niels A Müller, Yves Van de Peer, Xiao-Ru Wang, Nathaniel Robert Street, Ilga M Porth, Xinmin An, Jian-Feng Mao
High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar. Plant physiology (2024)
Tian-Le Shi, Kai-Hua Jia, Yu-Tao Bao, Shuai Nie, Xue-Chan Tian, Xue-Mei Yan, Zhao-Yang Chen, Zhi-Chao Li, Shi-Wei Zhao, Hai-Yao Ma, Ye Zhao, Xiang Li, Ren-Gang Zhang, Jing Guo, Wei Zhao, El-Kassaby Yousry, Niels A Müller, Yves Van de Peer, Xiao-Ru Wang, Nathaniel Robert Street, Ilga M Porth, Xinmin An, Jian-Feng Mao
High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar. Plant physiology 195 (1) (2024)
Xue-Chan Tian, Zhao-Yang Chen, Shuai Nie, Tian-Le Shi, Xue-Mei Yan, Yu-Tao Bao, Zhi-Chao Li, Hai-Yao Ma, Kai-Hua Jia, Wei Zhao, Jian-Feng Mao
Plant-LncPipe: a computational pipeline providing significant improvement in plant lncRNA identification. Horticulture research 11 (4) (2024)
Shi-Wei Zhao, Jing-Fang Guo, Lei Kong, Shuai Nie, Xue-Mei Yan, Tian-Le Shi, Xue-Chan Tian, Hai-Yao Ma, Yu-Tao Bao, Zhi-Chao Li, Zhao-Yang Chen, Ren-Gang Zhang, Yong-Peng Ma, El-Kassaby Yousry, Ilga M Porth, Wei Zhao, Jian-Feng Mao
Haplotype-resolved genome assembly of Coriaria nepalensis a non-legume nitrogen-fixing shrub. Scientific data 10 (1) (2023)
Ruili Li, Jing Xu, Zengxing Qi, Shi-Wei Zhao, Ran Zhao, Yanrui Ge, Ruofan Li, Xiuya Kong, Zhenying Wu, Xi Zhang, Qizouhong He, Yan Zhang, Ping-Li Liu, Lei Zhu, Jian-Feng Mao, Chun-Xiang Fu, George Komis, Paul Grünhofer, Lukas Schreiber, Jinxing Lin
High-resolution genome mapping and functional dissection of chlorogenic acid production in Lonicera maackii. Plant physiology (2023)
Wen-Bo Wang, He Xiang-Feng, Xue-Mei Yan, Bo Ma, Cun-Fu Lu, Jing Wu, Yi Zheng, Wen-He Wang, Xue Wen-Bo, Yousry A El-Kassaby, Ilga Porth, Ping-Sheng Leng, Zeng-Hui Hu, Jian-Feng Mao
Chromosome-scale genome assembly and insights into the metabolome and gene regulation of leaf color transition in an important oak species, Quercus dentata. The New phytologist (2023)
Tianquan Yang, Ren-Gang Zhang, Xiaoling Tian, Gang Yao, Yuanting Shen, Sihai Wang, Jian-Feng Mao, Guangyuan Li, Ai-Zhong Liu, Weibang Sun, Yong-Peng Ma
The chromosome-level genome assembly and genes involved in biosynthesis of nervonic acid of Malania oleifera. Scientific data 10 (1) (2023)
Shi-Wei Zhao, Jing-Fang Guo, Lei Kong, Shuai Nie, Xue-Mei Yan, Tian-Le Shi, Xue-Chan Tian, Hai-Yao Ma, Yu-Tao Bao, Zhi-Chao Li, Zhao-Yang Chen, Ren-Gang Zhang, Yong-Peng Ma, El-Kassaby Yousry, Ilga M Porth, Wei Zhao, Jian-Feng Mao
Haplotype-resolved genome assembly of Coriaria nepalensis a non-legume nitrogen-fixing shrub. Scientific data 10 (1) (2023)
Tianquan Yang, Ren-Gang Zhang, Xiaoling Tian, Gang Yao, Yuanting Shen, Sihai Wang, Jian-Feng Mao, Guangyuan Li, Ai-Zhong Liu, Weibang Sun, Yong-Peng Ma
The chromosome-level genome assembly and genes involved in biosynthesis of nervonic acid of Malania oleifera. Scientific data 10 (1) (2023)
Shi-Wei Zhao, Jing-Fang Guo, Lei Kong, Shuai Nie, Xue-Mei Yan, Tian-Le Shi, Xue-Chan Tian, Hai-Yao Ma, Yu-Tao Bao, Zhi-Chao Li, Zhao-Yang Chen, Ren-Gang Zhang, Yong-Peng Ma, El-Kassaby Yousry, Ilga M Porth, Wei Zhao, Jian-Feng Mao
Haplotype-resolved genome assembly of Coriaria nepalensis a non-legume nitrogen-fixing shrub. Scientific data 10 (1) (2023)
Wen-Bo Wang, Xiang-Feng He, Xue-Mei Yan, Bo Ma, Cun-Fu Lu, Jing Wu, Yi Zheng, Wen-He Wang, Wen-Bo Xue, Yousry A El-Kassaby, Ilga Porth, Ping-Sheng Leng, Zeng-Hui Hu, Jian-Feng Mao
Chromosome-scale genome assembly and insights into the metabolome and gene regulation of leaf color transition in an important oak species, Quercus dentata. The New phytologist (2023)
Shi-Wei Zhao, Jing-Fang Guo, Lei Kong, Shuai Nie, Xue-Mei Yan, Tian-Le Shi, Xue-Chan Tian, Hai-Yao Ma, Yu-Tao Bao, Zhi-Chao Li, Zhao-Yang Chen, Ren-Gang Zhang, Yong-Peng Ma, El-Kassaby Yousry, Ilga M Porth, Wei Zhao, Jian-Feng Mao
Haplotype-resolved genome assembly of Coriaria nepalensis a non-legume nitrogen-fixing shrub. Scientific data 10 (1) (2023)
Shi-Wei Zhao, Jing-Fang Guo, Lei Kong, Shuai Nie, Xue-Mei Yan, Tian-Le Shi, Xue-Chan Tian, Hai-Yao Ma, Yu-Tao Bao, Zhi-Chao Li, Zhao-Yang Chen, Ren-Gang Zhang, Yong-Peng Ma, El-Kassaby Yousry, Ilga M Porth, Wei Zhao, Jian-Feng Mao
Haplotype-resolved genome assembly of Coriaria nepalensis a non-legume nitrogen-fixing shrub. Scientific data 10 (1) (2023)
Tianquan Yang, Ren-Gang Zhang, Xiaoling Tian, Gang Yao, Yuanting Shen, Sihai Wang, Jian-Feng Mao, Guangyuan Li, Ai-Zhong Liu, Weibang Sun, Yong-Peng Ma
The chromosome-level genome assembly and genes involved in biosynthesis of nervonic acid of Malania oleifera. Scientific data 10 (1) (2023)
Ren-Gang Zhang, Chaoxia Lu, Guang-Yuan Li, Jie Lv, Longxin Wang, Zhao-Xuan Wang, Zhe Chen, Dan Liu, Ye Zhao, Tian-Le Shi, Wei Zhang, Zhao-Hui Tang, Jian-Feng Mao, Yong-Peng Ma, Kai-Hua Jia, Wei Zhao
Subgenome-aware analyses suggest a reticulate allopolyploidization origin in three Papaver genomes. Nature communications 14 (1) (2023)
Bo Ma, Jing Wu, Tian-Le Shi, Yun-Yao Yang, Wen-Bo Wang, Yi Zheng, Shu-Chai Su, Yun-Cong Yao, Wen-Bo Xue, Ilga Porth, El-Kassaby Yousry, Ping-Sheng Leng, Zeng-Hui Hu, Jian-Feng Mao
Lilac (Syringa oblata) genome provides insights into its evolution and molecular mechanism of petal color change. Communications biology 5 (1) (2022)
Jie Xu, Hang Luo, Shan-Shan Zhou, Si-Qian Jiao, Kai-Hua Jia, Shuai Nie, Hui Liu, Wei Zhao, Xiao-Ru Wang, Yousry A El-Kassaby, Ilga Porth, Jian-Feng Mao
UV-B and UV-C radiation trigger both common and distinctive signal perceptions and transmissions in Pinus tabuliformis Carr. Tree physiology 42 (8) (2022)
Kai-Hua Jia, Zhao-Xuan Wang, Longxin Wang, Guang-Yuan Li, Wei Zhang, Xiao-Ling Wang, Fang-Ji Xu, Si-Qian Jiao, Shan-Shan Zhou, Hui Liu, Yong-Peng Ma, Guiqi Bi, Wei Zhao, Yousry A El-Kassaby, Ilga Porth, Guowei Li, Ren-Gang Zhang, Jian-Feng Mao
SubPhaser: a robust allopolyploid subgenome phasing method based on subgenome-specific k-mers. The New phytologist 235 (2) (2022)
Shan-Shan Zhou, Xue-Mei Yan, Kai-Fu Zhang, Hui Liu, Jie Xu, Shuai Nie, Kai-Hua Jia, Si-Qian Jiao, Wei Zhao, You-Jie Zhao, Ilga Porth, El-Kassaby Yousry, Tongli Wang, Jian-Feng Mao
A comprehensive annotation dataset of intact LTR retrotransposons of 300 plant genomes. Scientific data 8 (1) (2021)
Xinmin An, Kai Gao, Zhong Chen, Juan Li, Xiong Yang, Xiaoyu Yang, Jing Zhou, Ting Guo, Tianyun Zhao, Sai Huang, Deyu Miao, Wasif Ullah Khan, Pian Rao, Meixia Ye, Bingqi Lei, Weihua Liao, Jia Wang, Lexiang Ji, Ying Li, Bin Guo, Nada Siddig Mustafa, Shanwen Li, Quanzheng Yun, Stephen R Keller, Jian-Feng Mao, Ren-Gang Zhang, Steven H Strauss
High quality haplotype-resolved genome assemblies of Populus tomentosa Carr., a stabilized interspecific hybrid species widespread in Asia. Molecular ecology resources (2021)
Shi-Ping Cheng, Kai-Hua Jia, Hui Liu, Ren-Gang Zhang, Zhi-Chao Li, Shan-Shan Zhou, Tian-Le Shi, Ai-Chu Ma, Cong-Wen Yu, Chan Gao, Guang-Lei Cao, Wei Zhao, Shuai Nie, Jing-Fang Guo, Si-Qian Jiao, Xue-Chan Tian, Xue-Mei Yan, Yu-Tao Bao, Quan-Zheng Yun, Xin-Zhu Wang, Ilga Porth, Yousry A El-Kassaby, Xiao-Ru Wang, Zhen Li, Yves Van de Peer, Jian-Feng Mao
Haplotype-resolved genome assembly and allele-specific gene expression in cultivated ginger. Horticulture research 8 (1) (2021)
Jie Xu, Hang Luo, Shuai Nie, Ren-Gang Zhang, Jian-Feng Mao
The complete mitochondrial and plastid genomes of Rhododendron simsii, an important parent of widely cultivated azaleas. Mitochondrial DNA. Part B, Resources 6 (3) (2021)
Li He, Kai-Hua Jia, Ren-Gang Zhang, Yuan Wang, Tian-Le Shi, Zhi-Chao Li, Si-Wen Zeng, Xin-Jie Cai, Natascha Dorothea Wagner, Elvira Hörandl, Aline Muyle, Ke Yang, Deborah Charlesworth, Jian-Feng Mao
Chromosome-scale assembly of the genome of Salix dunnii reveals a male-heterogametic sex determination system on chromosome 7. Molecular ecology resources 21 (6) (2021)
Jie Xu, Shuai Nie, Chao-Qun Xu, Hui Liu, Kai-Hua Jia, Shan-Shan Zhou, Wei Zhao, Xian-Qing Zhou, Yousry A El-Kassaby, Xiao-Ru Wang, Ilga Porth, Jian-Feng Mao
UV-B-induced molecular mechanisms of stress physiology responses in the major northern Chinese conifer Pinus tabuliformis Carr. Tree physiology 41 (7) (2021)
Kai-Hua Jia, Hui Liu, Ren-Gang Zhang, Jie Xu, Shan-Shan Zhou, Si-Qian Jiao, Xue-Mei Yan, Xue-Chan Tian, Tian-Le Shi, Hang Luo, Zhi-Chao Li, Yu-Tao Bao, Shuai Nie, Jing-Fang Guo, Ilga Porth, Yousry A El-Kassaby, Xiao-Ru Wang, Charles Chen, Yves Van de Peer, Wei Zhao, Jian-Feng Mao
Chromosome-scale assembly and evolution of the tetraploid Salvia splendens (Lamiaceae) genome. Horticulture research 8 (1) (2021)
Wei Zhao, Yan-Qiang Sun, Jin Pan, Alexis R Sullivan, Michael L Arnold, Jian-Feng Mao, Xiao-Ru Wang
Effects of landscapes and range expansion on population structure and local adaptation. The New phytologist 228 (1) (2020)
Qiuyue Ma, Tianlin Sun, Shushun Li, Jing Wen, Lu Zhu, Tongming Yin, Kunyuan Yan, Xiao Xu, Shuxian Li, Jian-Feng Mao, Ya-Nan Wang, Shuangxia Jin, Xing Zhao, Qianzhong Li
The Acer truncatum genome provides insights into nervonic acid biosynthesis. The Plant journal : for cell and molecular biology 104 (3) (2020)
Fu-Sheng Yang, Shuai Nie, Hui Liu, Tian-Le Shi, Xue-Chan Tian, Shan-Shan Zhou, Yu-Tao Bao, Kai-Hua Jia, Jing-Fang Guo, Wei Zhao, Na An, Ren-Gang Zhang, Quan-Zheng Yun, Xin-Zhu Wang, Chanaka Mannapperuma, Ilga Porth, El-Kassaby Yousry, Nathaniel Robert Street, Xiao-Ru Wang, Yves Van de Peer, Jian-Feng Mao
Chromosome-level genome assembly of a parent species of widely cultivated azaleas. Nature communications 11 (1) (2020)
Hang Luo, Jie Xu, Si-Qian Jiao, Ren-Gang Zhang, Jian-Feng Mao
The complete mitochondrial genome of an endangered tree: Malania oleifera. Mitochondrial DNA. Part B, Resources 5 (4) (2020)
Yuqing Jin, Wei Zhao, Shuai Nie, Si-Si Liu, El-Kassaby Yousry, Xiao-Ru Wang, Jian-Feng Mao
Genome-Wide Variant Identification and High-Density Genetic Map Construction Using RADseq for Platycladus orientalis (Cupressaceae). G3 (Bethesda, Md.) 9 (11) (2019)
Si-Qian Jiao, Yan-Qiang Sun, Dong-Xu Zhang, Qiong Gao, Yuqing Jin, Hui Liu, Yongpeng Ma, Yong Yang, Ilga Porth, Jian-Feng Mao
Development of novel EST-SSR markers for Ephedra sinica (Ephedraceae) by transcriptome database mining. Applications in plant sciences 7 (1) (2019)
Xing-Xing Xu, Fang-Yun Cheng, Li-Ping Peng, Yan-Qiang Sun, Xian-Ge Hu, San-Yuan Li, Hong-Li Xian, Kai-Hua Jia, Richard J Abbott, Jian-Feng Mao
Late Pleistocene speciation of three closely related tree peonies endemic to the Qinling-Daba Mountains, a major glacial refugium in Central China. Ecology and evolution 9 (13) (2019)
Kai-Hua Jia, Wei Zhao, Paul Andrew Maier, Xian-Ge Hu, Yuqing Jin, Shan-Shan Zhou, Si-Qian Jiao, Yousry A El-Kassaby, Tongli Wang, Xiao-Ru Wang, Jian-Feng Mao
Landscape genomics predicts climate change-related genetic offset for the widespread Platycladus orientalis (Cupressaceae). Evolutionary applications 13 (4) (2019)
Li-Sha Huang, Yan-Qiang Sun, Yuqing Jin, Qiong Gao, Xian-Ge Hu, Fu-Ling Gao, Xiao-Lei Yang, Ji-Jun Zhu, Yousry A El-Kassaby, Jian-Feng Mao
Development of high transferability cpSSR markers for individual identification and genetic investigation in Cupressaceae species. Ecology and evolution 8 (10) (2018)