Jiayuan Miao

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 14

Top Topics

Human Serum Albumin

Molecular Dynamics

Top Venues

The journal of physical chemistry. B

Chemical science

Nature communications

Journal of chemical information and modeling

This page only lists publications with an associated author ORCID identifier.

Publications

Jiayuan Miao, Arghya Pratim Ghosh, Minh Ngoc Ho, Chengxi Li, Xuejian Huang, Bradley L Pentelute, James D Baleja, Yu-Shan Lin
Assessing the Performance of Peptide Force Fields for Modeling the Solution Structural Ensembles of Cyclic Peptides. The journal of physical chemistry. B 128 (22) (2024)
Jiayuan Miao, Arghya Pratim Ghosh, Minh Ngoc Ho, Chengxi Li, Xuejian Huang, Bradley L Pentelute, James D Baleja, Yu-Shan Lin
Assessing the Performance of Peptide Force Fields for Modeling the Solution Structural Ensembles of Cyclic Peptides. The journal of physical chemistry. B 128 (22) (2024)
Jiayuan Miao, Arghya Pratim Ghosh, Minh Ngoc Ho, Chengxi Li, Xuejian Huang, Bradley L Pentelute, James D Baleja, Yu-Shan Lin
Assessing the Performance of Peptide Force Fields for Modeling the Solution Structural Ensembles of Cyclic Peptides. The journal of physical chemistry. B 128 (22) (2024)
Jiayuan Miao, Arghya Pratim Ghosh, Minh Ngoc Ho, Chengxi Li, Xuejian Huang, Bradley L Pentelute, James D Baleja, Yu-Shan Lin
Assessing the Performance of Peptide Force Fields for Modeling the Solution Structural Ensembles of Cyclic Peptides. The journal of physical chemistry. B (2024)
Jiayuan Miao, Arghya Pratim Ghosh, Minh Ngoc Ho, Chengxi Li, Xuejian Huang, Bradley L Pentelute, James D Baleja, Yu-Shan Lin
Assessing the Performance of Peptide Force Fields for Modeling the Solution Structural Ensembles of Cyclic Peptides. The journal of physical chemistry. B 128 (22) (2024)
Francini Fonseca Lopez, Jiayuan Miao, Jovan Damjanovic, Luca Bischof, Michael B Braun, Yingjie Ling, Marcus D Hartmann, Yu-Shan Lin, Joshua A Kritzer
Computational Prediction of Cyclic Peptide Structural Ensembles and Application to the Design of Keap1 Binders. Journal of chemical information and modeling (2023)
Jeffrey Y-K Wong, Arunika I Ekanayake, Serhii Kharchenko, Steven E Kirberger, Ryan Qiu, Payam Kelich, Susmita Sarkar, Jianqian Li, Kleinberg X Fernandez, Edgar R Alvizo-Paez, Jiayuan Miao, Shiva Kalhor-Monfared, J Dwyer John, Hongsuk Kang, Hwanho Choi, John M Nuss, John C Vederas, Yu-Shan Lin, Matthew Scott Macauley, Lela Vukovic, William C K Pomerantz, Ratmir Derda
Genetically encoded discovery of perfluoroaryl macrocycles that bind to albumin and exhibit extended circulation in vivo. Nature communications 14 (1) (2023)
Jeffrey Y-K Wong, Arunika I Ekanayake, Serhii Kharchenko, Steven E Kirberger, Ryan Qiu, Payam Kelich, Susmita Sarkar, Jiaqian Li, Kleinberg X Fernandez, Edgar R Alvizo-Paez, Jiayuan Miao, Shiva Kalhor-Monfared, J Dwyer John, Hongsuk Kang, Hwanho Choi, John M Nuss, John C Vederas, Yu-Shan Lin, Matthew Scott Macauley, Lela Vukovic, William C K Pomerantz, Ratmir Derda
Author Correction: Genetically encoded discovery of perfluoroaryl macrocycles that bind to albumin and exhibit extended circulation in vivo. Nature communications 14 (1) (2023)
Tiffani Hui, Marc L Descoteaux, Jiayuan Miao, Yu-Shan Lin
Training Neural Network Models Using Molecular Dynamics Simulation Results to Efficiently Predict Cyclic Hexapeptide Structural Ensembles. Journal of chemical theory and computation (2023)
Jennifer C Mortensen, Jovan Damjanovic, Jiayuan Miao, Tiffani Hui, Yu-Shan Lin
A backbone-dependent rotamer library with high (ϕ, ψ) coverage using metadynamics simulations. Protein science : a publication of the Protein Society 31 (12) (2022)
Jiayuan Miao, Marc L Descoteaux, Yu-Shan Lin
Structure prediction of cyclic peptides by molecular dynamics + machine learning. Chemical science 12 (44) (2021)
Kamlesh M Makwana, Matthew P Sarnowski, Jiayuan Miao, Yu-Shan Lin, Juan R Del Valle
N-Amination Converts Amyloidogenic Tau Peptides into Soluble Antagonists of Cellular Seeding. ACS chemical neuroscience 12 (20) (2021)
Jennifer R Pace, Bryan J Lampkin, Charles Abakah, Adam Moyer, Jiayuan Miao, Kirsten Deprey, Robert A Cerulli, Yu-Shan Lin, James D Baleja, David Baker, Joshua A Kritzer
Stapled β-Hairpins Featuring 4-Mercaptoproline. Journal of the American Chemical Society 143 (37) (2021)
Jeffrey Y-K Wong, Raja Mukherjee, Jiayuan Miao, Olena Bilyk, Vivian Triana, Mark Miskolzie, Antoine Henninot, John J Dwyer, Serhii Kharchenko, Anna Iampolska, Dmitriy M Volochnyuk, Yu-Shan Lin, Lynne-Marie Postovit, Ratmir Derda
Genetically-encoded discovery of proteolytically stable bicyclic inhibitors for morphogen NODAL. Chemical science 12 (28) (2021)