Jonathan T C Liu (Jonathan Tc Liu)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 24

Top Venues

Nature protocols

Biomedical optics express

Journal of biomedical optics

Journal of biophotonics

This page only lists publications with an associated author ORCID identifier.

Publications

Kevin W Bishop, Lindsey A Erion Barner, Qinghua Han, Elena Baraznenok, Lydia Lan, Chetan Poudel, Gan Gao, Robert B Serafin, Sarah S L Chow, Adam K Glaser, Andrew Janowczyk, David Brenes, Hongyi Huang, Dominie Miyasato, Lawrence D True, Soyoung Kang, Joshua C Vaughan, Jonathan T C Liu
An end-to-end workflow for nondestructive 3D pathology. Nature protocols (2024)
Rui Wang, Sarah S L Chow, Robert B Serafin, Weisi Xie, Qinghua Han, Elena Baraznenok, Lydia Lan, Kevin W Bishop, Jonathan T C Liu
Direct three-dimensional segmentation of prostate glands with nnU-Net. Journal of biomedical optics 29 (3) (2024)
Kevin W Bishop, Lindsey A Erion Barner, Qinghua Han, Elena Baraznenok, Lydia Lan, Chetan Poudel, Gan Gao, Robert B Serafin, Sarah S L Chow, Adam K Glaser, Andrew Janowczyk, David Brenes, Hongyi Huang, Dominie Miyasato, Lawrence D True, Soyoung Kang, Joshua C Vaughan, Jonathan T C Liu
An end-to-end workflow for nondestructive 3D pathology. Nature protocols 19 (4) (2024)
Rui Wang, Sarah S L Chow, Robert B Serafin, Weisi Xie, Qinghua Han, Elena Baraznenok, Lydia Lan, Kevin W Bishop, Jonathan T C Liu
Direct three-dimensional segmentation of prostate glands with nnU-Net. Journal of biomedical optics 29 (3) (2024)
Kevin W Bishop, Lindsey A Erion Barner, Qinghua Han, Elena Baraznenok, Lydia Lan, Chetan Poudel, Gan Gao, Robert B Serafin, Sarah S L Chow, Adam K Glaser, Andrew Janowczyk, David Brenes, Hongyi Huang, Dominie Miyasato, Lawrence D True, Soyoung Kang, Joshua C Vaughan, Jonathan T C Liu
An end-to-end workflow for nondestructive 3D pathology. Nature protocols 19 (4) (2024)
Kevin W Bishop, Lindsey A Erion Barner, Qinghua Han, Elena Baraznenok, Lydia Lan, Chetan Poudel, Gan Gao, Robert B Serafin, Sarah S L Chow, Adam K Glaser, Andrew Janowczyk, David Brenes, Hongyi Huang, Dominie Miyasato, Lawrence D True, Soyoung Kang, Joshua C Vaughan, Jonathan T C Liu
An end-to-end workflow for nondestructive 3D pathology. Nature protocols (2024)
Rui Wang, Sarah S L Chow, Robert B Serafin, Weisi Xie, Qinghua Han, Elena Baraznenok, Lydia Lan, Kevin W Bishop, Jonathan T C Liu
Direct three-dimensional segmentation of prostate glands with nnU-Net. Journal of biomedical optics 29 (3) (2024)
Jonathan T C Liu, Sarah S L Chow, Richard Colling, Michelle R Downes, Xavier Farré, Peter Humphrey, Andrew Janowczyk, Tuomas Mirtti, Clare Verrill, Inti Zlobec, Lawrence D True
Engineering the future of 3D pathology. The journal of pathology. Clinical research (2023)
Kevin W Bishop, Lindsey A Erion Barner, Qinghua Han, Elena Baraznenok, Lydia Lan, Chetan Poudel, Gan Gao, Robert B Serafin, Sarah S L Chow, Adam K Glaser, Andrew Janowczyk, David Brenes, Hongyi Huang, Dominie Miyasato, Lawrence D True, Soyoung Kang, Joshua C Vaughan, Jonathan T C Liu
An end-to-end workflow for non-destructive 3D pathology. bioRxiv : the preprint server for biology (2023)
Kevin W Bishop, Bingwen Hu, Rajat Vyawhare, Zelin Yang, David C Liang, Gan Gao, Elena Baraznenok, Qinghua Han, Lydia Lan, Sarah S L Chow, Nader Sanai, Jonathan T C Liu
Miniature line-scanned dual-axis confocal microscope for versatile clinical use. Biomedical optics express 14 (11) (2023)
Robert B Serafin, Can F Koyuncu, Weisi Xie, Hongyi Huang, Adam K Glaser, Nicholas P Reder, Andrew Janowczyk, Lawrence D True, Anant Madabhushi, Jonathan T C Liu
Nondestructive 3D pathology with analysis of nuclear features for prostate cancer risk assessment. The Journal of pathology (2023)
Jonathan T C Liu, Gemma Bale, Regine Choe, Daniel S Elson, Amy Oldenburg, Lin Tian, Eric R Tkaczyk
Introduction to the Biophotonics Congress 2022 feature issue. Biomedical optics express 14 (1) (2022)
Jonathan T C Liu, Gemma Bale, Regine Choe, Daniel S Elson, Amy Oldenburg, Lin Tian, Eric R Tkaczyk
Introduction to the Biophotonics Congress 2022 feature issue. Biomedical optics express 14 (1) (2022)
Adam K Glaser, Kevin W Bishop, Lindsey A Barner, Etsuo A Susaki, Shimpei I Kubota, Gan Gao, Robert B Serafin, Pooja Balaram, Emily Turschak, Philip R Nicovich, Hoyin Lai, Luciano A G Lucas, Yating Yi, Eva K Nichols, Hongyi Huang, Nicholas P Reder, Jasmine J Wilson, Ramya Sivakumar, Elya Shamskhou, Caleb R Stoltzfus, Xing Wei, Andrew K Hempton, Marko Pende, Prayag Murawala, Hans-Ulrich Dodt, Takato Imaizumi, Jay Shendure, Brian J Beliveau, Michael Y Gerner, Li Xin, Hu Zhao, Lawrence D True, R Clay Reid, Jayaram Chandrashekar, Hiroki R Ueda, Karel Svoboda, Jonathan T C Liu
A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues. Nature methods 19 (5) (2022)
Min Yen Lee, Chenyi Mao, Adam K Glaser, Marcus A Woodworth, Aaron R Halpern, Adilijiang Ali, Jonathan T C Liu, Joshua C Vaughan
Fluorescent labeling of abundant reactive entities (FLARE) for cleared-tissue and super-resolution microscopy. Nature protocols 17 (3) (2022)
Jonathan T C Liu, Adam K Glaser, Kaustav Bera, Lawrence D True, Nicholas P Reder, Kevin W Eliceiri, Anant Madabhushi
Harnessing non-destructive 3D pathology. Nature biomedical engineering 5 (3) (2021)
Weisi Xie, Nicholas P Reder, Can F Koyuncu, Patrick Leo, Sarah Hawley, Hongyi Huang, Chenyi Mao, Nadia Postupna, Soyoung Kang, Robert Serafin, Gan Gao, Qinghua Han, Kevin W Bishop, Lindsey A Barner, Pingfu Fu, Jonathan L Wright, C Dirk Keene, Joshua C Vaughan, Andrew Janowczyk, Adam K Glaser, Anant Madabhushi, Lawrence D True, Jonathan T C Liu
Prostate cancer risk stratification via non-destructive 3D pathology with deep learning-assisted gland analysis. Cancer research (2021)
Kevin W Bishop, Adam K Glaser, Jonathan T C Liu
Performance tradeoffs for single- and dual-objective open-top light-sheet microscope designs: a simulation-based analysis. Biomedical optics express 11 (8) (2020)
Lindsey A Barner, Adam K Glaser, Hongyi Huang, Lawrence D True, Jonathan T C Liu
Multi-resolution open-top light-sheet microscopy to enable efficient 3D pathology workflows. Biomedical optics express 11 (11) (2020)
Chenyi Mao, Min Yen Lee, Jing-Ru Jhan, Aaron R Halpern, Marcus A Woodworth, Adam K Glaser, Tyler J Chozinski, Leonard Shin, Jeffrey W Pippin, Stuart J Shankland, Jonathan T C Liu, Joshua C Vaughan
Feature-rich covalent stains for super-resolution and cleared tissue fluorescence microscopy. Science advances 6 (22) (2020)
Adam K Glaser, Nicholas P Reder, Ye Chen, Chengbo Yin, Linpeng Wei, Soyoung Kang, Lindsey A Barner, Weisi Xie, Erin F McCarty, Chenyi Mao, Aaron R Halpern, Caleb R Stoltzfus, Jonathan S Daniels, Michael Y Gerner, Philip R Nicovich, Joshua C Vaughan, Lawrence D True, Jonathan T C Liu
Multi-immersion open-top light-sheet microscope for high-throughput imaging of cleared tissues. Nature communications 10 (1) (2019)
Adam K Glaser, Ye Chen, Chengbo Yin, Linpeng Wei, Lindsey A Barner, Nicholas P Reder, Jonathan T C Liu
Multidirectional digital scanned light-sheet microscopy enables uniform fluorescence excitation and contrast-enhanced imaging. Scientific reports 8 (1) (2018)
Soyoung Kang, Yu Winston Wang, Xiaochun Xu, Eric Navarro, Kenneth M Tichauer, Jonathan T C Liu
Microscopic investigation of" topically applied nanoparticles for molecular imaging of fresh tissue surfaces. Journal of biophotonics 11 (4) (2018)
Ryan M Davis, Jos L Campbell, Sean Burkitt, Zhen Qiu, Soyoung Kang, Mana Mehraein, Dominie Miyasato, Helen Salinas, Jonathan T C Liu, Cristina Zavaleta
A Raman Imaging Approach Using CD47 Antibody-Labeled SERS Nanoparticles for Identifying Breast Cancer and Its Potential to Guide Surgical Resection. Nanomaterials (Basel, Switzerland) 8 (11) (2018)

Jonathan T C Liu.css-eqlu8i{font-size:small;padding-left:4px;} (Jonathan Tc Liu)

Publication Activity (10 Years)

Top Topics

Top Venues

Jonathan T C Liu (Jonathan Tc Liu)