Karel Svoboda

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 23

Top Topics

Spinal Cord Injury

Fluorescent Probe

Nitric Oxide Synthase

Top Venues

Nature communications

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Oren Amsalem, Hidehiko K Inagaki, Jianing Yu, Karel Svoboda, Ran Darshan
Sub-threshold neuronal activity and the dynamical regime of cerebral cortex. Nature communications 15 (1) (2024)
Yan Zhang, Márton Rózsa, Yajie Liang, Daniel Bushey, Ziqiang Wei, Jihong Zheng, Daniel Reep, Gerard Joey Broussard, Arthur Tsang, Getahun Tsegaye, Sujatha Narayan, Christopher J Obara, Jing-Xuan Lim, Ronak Patel, Rongwei Zhang, Misha B Ahrens, Glenn C Turner, Samuel S-H Wang, Wyatt L Korff, Eric R Schreiter, Karel Svoboda, Jeremy P Hasseman, Ilya Kolb, Loren L Looger
Fast and sensitive GCaMP calcium indicators for imaging neural populations. Nature (2023)
Yan Zhang, Márton Rózsa, Yajie Liang, Daniel Bushey, Ziqiang Wei, Jihong Zheng, Daniel Reep, Gerard Joey Broussard, Arthur Tsang, Getahun Tsegaye, Sujatha Narayan, Christopher J Obara, Jing-Xuan Lim, Ronak Patel, Rongwei Zhang, Misha B Ahrens, Glenn C Turner, Samuel S-H Wang, Wyatt L Korff, Eric R Schreiter, Karel Svoboda, Jeremy P Hasseman, Ilya Kolb, Loren L Looger
Fast and sensitive GCaMP calcium indicators for imaging neural populations. Nature (2023)
Christopher M Kim, Arseny Finkelstein, Carson C Chow, Karel Svoboda, Ran Darshan
Distributing task-related neural activity across a cortical network through task-independent connections. Nature communications 14 (1) (2023)
John K Mich, Smrithi Sunil, Nelson J Johansen, Refugio A Martinez, Mckaila Leytze, Bryan B Gore, Joseph T Mahoney, Yoav Ben-Simon, Yemeserach Bishaw, Krissy Brouner, Jazmin Campos, Ryan A Canfield, Tamara Casper, Nick Dee, Tom Egdorf, Amanda Gary, Shane Gibson, Jeff Goldy, Erin L Groce, Daniel Hirschstein, Luke V Loftus, Nicholas A Lusk, Jocelin Malone, Naomi X Martin, Deja Monet, Victoria Omstead, Ximena Opitz-Araya, Aaron Oster, Christina Alice Pom, Lydia Potekhina, Melissa Reding, Christine Rimorin, Augustin Ruiz, Adriana Sedeño Cortés, Nadiya V Shapovalova, Michael J Taormina, Naz Taskin, Michael Tieu, Nasmil Valera Cuevas, Natalie Weed, Sharon W Way, Zizhen Yao, Delissa A McMillen, Michael Kunst, Medea McGraw, Bargavi Thyagarajan, Jack Waters, Trygve E Bakken, Shenqin Yao, Kimberly A Smith, Karel Svoboda, Kaspar Podgorski, Yoshiko Kojima, Gregory D Horwitz, Hongkui Zeng, Tanya L Daigle, Ed S Lein, Bosiljka Tasic, Jonathan T Ting, Boaz P Levi
Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species. bioRxiv : the preprint server for biology (2023)
Christopher M Kim, Arseny Finkelstein, Carson C Chow, Karel Svoboda, Ran Darshan
Distributing task-related neural activity across a cortical network through task-independent connections. Nature communications 14 (1) (2023)
Adam K Glaser, Jayaram Chandrashekar, Joshua Vasquez, Cameron Arshadi, Naveen Ouellette, Xiaoyun Jiang, Judith Baka, Gabor Kovacs, Micah Woodard, Sharmishtaa Seshamani, Kevin Cao, Nathan Clack, Andrew Recknagel, Anna Grim, Pooja Balaram, Emily Turschak, Alan Liddell, John Rohde, Ayana Hellevik, Kevin Takasaki, Lindsey A Erion Barner, Molly Logsdon, Chris Chronopoulos, Saskia E J de Vries, Jonathan T Ting, Steve I Perlmutter, Brian E Kalmbach, Nikolai C Dembrow, R Clay Reid, David Feng, Karel Svoboda
Expansion-assisted selective plane illumination microscopy for nanoscale imaging of centimeter-scale tissues. bioRxiv : the preprint server for biology (2023)
Christopher M Kim, Arseny Finkelstein, Carson C Chow, Karel Svoboda, Ran Darshan
Distributing task-related neural activity across a cortical network through task-independent connections. Nature communications 14 (1) (2023)
Ian Covert, Rohan Gala, Tim Wang, Karel Svoboda, Uygar Sümbül, Su-In Lee
Predictive and robust gene selection for spatial transcriptomics. Nature communications 14 (1) (2023)
Christopher M Kim, Arseny Finkelstein, Carson C Chow, Karel Svoboda, Ran Darshan
Distributing task-related neural activity across a cortical network through task-independent connections. Nature communications 14 (1) (2023)
Adam K Glaser, Kevin W Bishop, Lindsey A Barner, Etsuo A Susaki, Shimpei I Kubota, Gan Gao, Robert B Serafin, Pooja Balaram, Emily Turschak, Philip R Nicovich, Hoyin Lai, Luciano A G Lucas, Yating Yi, Eva K Nichols, Hongyi Huang, Nicholas P Reder, Jasmine J Wilson, Ramya Sivakumar, Elya Shamskhou, Caleb R Stoltzfus, Xing Wei, Andrew K Hempton, Marko Pende, Prayag Murawala, Hans-Ulrich Dodt, Takato Imaizumi, Jay Shendure, Brian J Beliveau, Michael Y Gerner, Li Xin, Hu Zhao, Lawrence D True, R Clay Reid, Jayaram Chandrashekar, Hiroki R Ueda, Karel Svoboda, Jonathan T C Liu
A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues. Nature methods 19 (5) (2022)
Kayvon Daie, Karel Svoboda, Shaul Druckmann
Targeted photostimulation uncovers circuit motifs supporting short-term memory. Nature neuroscience 24 (2) (2021)
Arseny Finkelstein, Lorenzo Fontolan, Michael N Economo, Nuo Li, Sandro Romani, Karel Svoboda
Attractor dynamics gate cortical information flow during decision-making. Nature neuroscience 24 (6) (2021)
Nicholas A Steinmetz, Çağatay Aydin, Anna Lebedeva, Michael Okun, Marius Pachitariu, Marius Bauza, Maxime Beau, Jai Bhagat, Claudia Böhm, Martijn Broux, Susu Chen, Jennifer Colonell, Richard J Gardner, Bill Karsh, Fabian Kloosterman, Dimitar Kostadinov, Carolina Mora-Lopez, John O'Callaghan, Junchol Park, Jan Putzeys, Britton Sauerbrei, Rik J J van Daal, Abraham Z Vollan, Shiwei Wang, Marleen Welkenhuysen, Zhiwen Ye, Joshua Tate Dudman, Barundeb Dutta, Adam W Hantman, Kenneth D Harris, Albert K Lee, Edvard I Moser, John O'Keefe, Alfonso Renart, Karel Svoboda, Michael Häusser, Sebastian Haesler, Tatsuo K Sato, Timothy D Harris
Neuropixels 2.0: A miniaturized high-density probe for stable, long-term brain recordings. Science (New York, N.Y.) 372 (6539) (2021)
Liu D Liu, Susu Chen, Han Hou, Steven J West, Mayo Faulkner, null null, Michael N Economo, Nuo Li, Karel Svoboda
Accurate Localization of Linear Probe Electrode Arrays across Multiple Brains. eNeuro 8 (6) (2021)
Rongwen Lu, Yajie Liang, Guanghan Meng, Pengcheng Zhou, Karel Svoboda, Liam Paninski, Na Ji
Rapid mesoscale volumetric imaging of neural activity with synaptic resolution. Nature methods 17 (3) (2020)
Abbas Kazemipour, Ondrej Novak, Daniel Flickinger, Jonathan S Marvin, Ahmed S Abdelfattah, Jonathan King, Philip M Borden, Jeong Jun Kim, Sarah H Al-Abdullatif, Parker E Deal, Evan W Miller, Eric R Schreiter, Shaul Druckmann, Karel Svoboda, Loren L Looger, Kaspar Podgorski
Kilohertz frame-rate two-photon tomography. Nature methods 16 (8) (2019)
Aaron Kerlin, Boaz Mohar, Daniel Flickinger, Bryan J MacLennan, Matthew B Dean, Courtney Davis, Nelson Spruston, Karel Svoboda
Functional clustering of dendritic activity during decision-making. eLife 8 (2019)
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel, John J Macklin, Yang Chen, Arthur Konnerth, Vivek Jayaraman, Loren L Looger, Eric R Schreiter, Karel Svoboda, Douglas S Kim
High-performance calcium sensors for imaging activity in neuronal populations and microcompartments. Nature methods 16 (7) (2019)
Nuo Li, Susu Chen, Zengcai V Guo, Han Chen, Yan Huo, Hidehiko K Inagaki, Guang Chen, Courtney Davis, David Hansel, Caiying Guo, Karel Svoboda
Spatiotemporal constraints on optogenetic inactivation in cortical circuits. eLife 8 (2019)
Ahmed S Abdelfattah, Takashi Kawashima, Amrita Singh, Ondrej Novak, Hui Liu, Yichun Shuai, Yi-Chieh Huang, Luke Campagnola, Stephanie C Seeman, Jianing Yu, Jihong Zheng, Jonathan B Grimm, Ronak Patel, Johannes Friedrich, Brett D Mensh, Liam Paninski, John J Macklin, Gabe J Murphy, Kaspar Podgorski, Bei-Jung Lin, Tsai-Wen Chen, Glenn C Turner, Zhe J Liu, Minoru Koyama, Karel Svoboda, Misha B Ahrens, Luke D Lavis, Eric R Schreiter
Bright and photostable chemigenetic indicators for extended in vivo voltage imaging. Science (New York, N.Y.) 365 (6454) (2019)
Nicholas James Sofroniew, Daniel Flickinger, Jonathan King, Karel Svoboda
A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging. eLife 5 (2016)
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita, Ronak Patel, John J Macklin, Cornelia I Bargmann, Misha B Ahrens, Eric R Schreiter, Vivek Jayaraman, Loren L Looger, Karel Svoboda, Douglas S Kim
Sensitive red protein calcium indicators for imaging neural activity. eLife 5 (2016)