Joshua K Michener

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 23

Top Topics

Escherichia Coli

Mass Spectrometry

Density Functional Theory

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Nature communications

Applied and environmental microbiology

This page only lists publications with an associated author ORCID identifier.

Publications

Fletcher Metz, Abigail M Olsen, Fachuang Lu, Kevin S Myers, Marco N Allemann, Joshua K Michener, Daniel R Noguera, Timothy J Donohue
Catabolism of β-5 linked aromatics by Novosphingobium aromaticivorans . mBio 15 (8) (2024)
Fletcher Metz, Abigail M Olsen, Fachuang Lu, Kevin S Myers, Marco N Allemann, Joshua K Michener, Daniel R Noguera, Timothy J Donohue
Catabolism of β-5 linked aromatics by Novosphingobium aromaticivorans . mBio 15 (8) (2024)
Fletcher Metz, Abigail M Olsen, Fachuang Lu, Kevin S Myers, Marco N Allemann, Joshua K Michener, Daniel R Noguera, Timothy J Donohue
Catabolism of β-5 linked aromatics by Novosphingobium aromaticivorans . mBio 15 (8) (2024)
Fletcher Metz, Abigail M Olsen, Fachuang Lu, Kevin S Myers, Marco N Allemann, Joshua K Michener, Daniel R Noguera, Timothy J Donohue
Catabolism of β-5 linked aromatics by Novosphingobium aromaticivorans . mBio (2024)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Eugene Kuatsjah, Michael Zahn, Xiangyang Chen, Ryo Kato, Daniel J Hinchen, Mikhail O Konev, Rui Katahira, Christian M Orr, Armin Wagner, Yike Zou, Stefan J Haugen, Kelsey J Ramirez, Joshua K Michener, Andrew R Pickford, Naofumi Kamimura, Eiji Masai, K N Houk, John E McGeehan, Gregg T Beckham
Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Eugene Kuatsjah, Michael Zahn, Xiangyang Chen, Ryo Kato, Daniel J Hinchen, Mikhail O Konev, Rui Katahira, Christian M Orr, Armin Wagner, Yike Zou, Stefan J Haugen, Kelsey J Ramirez, Joshua K Michener, Andrew R Pickford, Naofumi Kamimura, Eiji Masai, K N Houk, John E McGeehan, Gregg T Beckham
Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Eugene Kuatsjah, Michael Zahn, Xiangyang Chen, Ryo Kato, Daniel J Hinchen, Mikhail O Konev, Rui Katahira, Christian M Orr, Armin Wagner, Yike Zou, Stefan J Haugen, Kelsey J Ramirez, Joshua K Michener, Andrew R Pickford, Naofumi Kamimura, Eiji Masai, K N Houk, John E McGeehan, Gregg T Beckham
Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Eugene Kuatsjah, Michael Zahn, Xiangyang Chen, Ryo Kato, Daniel J Hinchen, Mikhail O Konev, Rui Katahira, Christian M Orr, Armin Wagner, Yike Zou, Stefan J Haugen, Kelsey J Ramirez, Joshua K Michener, Andrew R Pickford, Naofumi Kamimura, Eiji Masai, K N Houk, John E McGeehan, Gregg T Beckham
Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Eugene Kuatsjah, Michael Zahn, Xiangyang Chen, Ryo Kato, Daniel J Hinchen, Mikhail O Konev, Rui Katahira, Christian M Orr, Armin Wagner, Yike Zou, Stefan J Haugen, Kelsey J Ramirez, Joshua K Michener, Andrew R Pickford, Naofumi Kamimura, Eiji Masai, K N Houk, John E McGeehan, Gregg T Beckham
Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Eugene Kuatsjah, Michael Zahn, Xiangyang Chen, Ryo Kato, Daniel J Hinchen, Mikhail O Konev, Rui Katahira, Christian M Orr, Armin Wagner, Yike Zou, Stefan J Haugen, Kelsey J Ramirez, Joshua K Michener, Andrew R Pickford, Naofumi Kamimura, Eiji Masai, K N Houk, John E McGeehan, Gregg T Beckham
Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
John F Cahill, Vlimos Kertesz, Patricia Saint-Vincent, Hannah Valentino, Erin Drufva, Nikki A Thiele, Joshua K Michener
High-Throughput Characterization and Optimization of Polyamide Hydrolase Activity Using Open Port Sampling Interface Mass Spectrometry. Journal of the American Society for Mass Spectrometry (2023)
Aivett Bilbao, Nathalie Munoz Munoz, Joonhoon Kim, Daniel J Orton, Yuqian Gao, Kunal Poorey, Kyle R Pomraning, Karl Weitz, Meagan Burnet, Carrie D Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D Smith, Joshua K Michener, John M Gladden, Erin S Baker, Christopher J Petzold, Young-Mo Kim, Alex Apffel, John M Gladden, Kristin E Burnum-Johnson
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements. Nature communications 14 (1) (2023)
Jessica A M Moore, Paul E Abraham, Joshua K Michener, Wellington Muchero, Melissa A Cregger
Ecosystem consequences of introducing plant growth promoting rhizobacteria to managed systems and potential legacy effects. The New phytologist 234 (6) (2022)
Delyana P Vasileva, Jared C Streich, Leah H Burdick, Dawn M Klingeman, Hari B Chhetri, Christa M Brelsford, J Christopher Ellis, Dan M Close, Daniel A Jacobson, Joshua K Michener
Protoplast fusion in Bacillus species produces frequent, unbiased, genome-wide homologous recombination. Nucleic acids research 50 (11) (2022)
E Anne Hatmaker, Gerald N Presley, Olivia N Cannon, Joshua K Michener, Adam M Guss, James G Elkins
Complete Genome Sequences of Four Natural Pseudomonas Isolates That Catabolize a Wide Range of Aromatic Compounds Relevant to Lignin Valorization. Microbiology resource announcements 9 (49) (2020)
Dan M Close, Connor J Cooper, Xingyou Wang, Payal Chirania, Madhulika Gupta, John R Ossyra, Richard J Giannone, Nancy Engle, Timothy J Tschaplinski, Jeremy C Smith, Lizbeth Hedstrom, Jerry M Parks, Joshua K Michener
Horizontal transfer of a pathway for coumarate catabolism unexpectedly inhibits purine nucleotide biosynthesis. Molecular microbiology 112 (6) (2019)
Larry J Millet, Jessica M Vélez, Joshua K Michener
Genetic Selection for Small Molecule Production in Competitive Microfluidic Droplets. ACS synthetic biology 8 (8) (2019)
Jacob H Cecil, David C Garcia, Richard J Giannone, Joshua K Michener
Rapid, Parallel Identification of Catabolism Pathways of Lignin-Derived Aromatic Compounds in Novosphingobium aromaticivorans. Applied and environmental microbiology 84 (22) (2018)
Sonya M Clarkson, Richard J Giannone, Donna M Kridelbaugh, James G Elkins, Adam M Guss, Joshua K Michener
Construction and Optimization of a Heterologous Pathway for Protocatechuate Catabolism in Escherichia coli Enables Bioconversion of Model Aromatic Compounds. Applied and environmental microbiology 83 (18) (2017)