Takashi Hashimoto (Kazuki Saito)

ResearcherID Loop profile Researcher Name Resolver ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 38

Top Topics

Mass Spectrometry

Network Analysis

Top Venues

Plant physiology

Plants (Basel, Switzerland)

Nature communications

DNA research : an international journal for rapid publication of reports on genes and genomes

This page only lists publications with an associated author ORCID identifier.

Publications

Keting Chen, Liza Esther Alexander, Umnia Mahgoub, Yozo Okazaki, Yasuhiro Higashi, Ann M Perera, Lucas J Showman, Derek Loneman, Tesia S Dennison, Miriam D Lopez, Reid Claussen, Layton Peddicord, Takashi Hashimoto, Nick Lauter, Karin S Dorman, Basil J Nikolau, Marna D Yandeau-Nelson
Dynamic relationships among pathways producing hydrocarbons and fatty acids of maize silk cuticular waxes. Plant physiology (2024)
Keting Chen, Liza Esther Alexander, Umnia Mahgoub, Yozo Okazaki, Yasuhiro Higashi, Ann M Perera, Lucas J Showman, Derek Loneman, Tesia S Dennison, Miriam D Lopez, Reid Claussen, Layton Peddicord, Takashi Hashimoto, Nick Lauter, Karin S Dorman, Basil J Nikolau, Marna D Yandeau-Nelson
Dynamic relationships among pathways producing hydrocarbons and fatty acids of maize silk cuticular waxes. Plant physiology 195 (3) (2024)
Keting Chen, Liza Esther Alexander, Umnia Mahgoub, Yozo Okazaki, Yasuhiro Higashi, Ann M Perera, Lucas J Showman, Derek Loneman, Tesia S Dennison, Miriam D Lopez, Reid Claussen, Layton Peddicord, Takashi Hashimoto, Nick Lauter, Karin S Dorman, Basil J Nikolau, Marna D Yandeau-Nelson
Dynamic relationships among pathways producing hydrocarbons and fatty acids of maize silk cuticular waxes. Plant physiology 195 (3) (2024)
Soichiro Honda, Yumiko Yamazaki, Takumi Mukada, Weiguo Cheng, Masaru Chuba, Yozo Okazaki, Takashi Hashimoto, Akira Oikawa, Hayato Maruyama, Jun Wasaki, Tadao Wagatsuma, Keitaro Tawaraya
Lipidome Profiling of Phosphorus Deficiency-Tolerant Rice Cultivars Reveals Remodeling of Membrane Lipids as a Mechanism of Low P Tolerance. Plants (Basel, Switzerland) 12 (6) (2023)
Naoko Yoshimoto, Takashi Asano, Ayuna Kisanuki, Chihiro Kanno, Machiko Asanuma, Mami Yamazaki, Isao Fujii, Takashi Hashimoto
Correction to: The ability of callus tissues induced from three Allium plants to accumulate health-beneficial natural products, S-alk(en)ylcysteine sulfoxides. Journal of natural medicines (2023)
Tsubasa Shoji, Satoko Sugawara, Tetsuya Mori, Makoto Kobayashi, Miyako Kusano, Takashi Hashimoto
Induced production of specialized steroids by transcriptional reprogramming in Petunia hybrida . PNAS nexus 2 (10) (2023)
Tsubasa Shoji, Takashi Hashimoto, Takashi Hashimoto
Genetic regulation and manipulation of nicotine biosynthesis in tobacco: Strategies to eliminate addictive alkaloids. Journal of experimental botany (2023)
Soichiro Honda, Yumiko Yamazaki, Takumi Mukada, Weiguo Cheng, Masaru Chuba, Yozo Okazaki, Takashi Hashimoto, Akira Oikawa, Hayato Maruyama, Jun Wasaki, Tadao Wagatsuma, Keitaro Tawaraya
Lipidome Profiling of Phosphorus Deficiency-Tolerant Rice Cultivars Reveals Remodeling of Membrane Lipids as a Mechanism of Low P Tolerance. Plants (Basel, Switzerland) 12 (6) (2023)
Soichiro Honda, Yumiko Yamazaki, Takumi Mukada, Weiguo Cheng, Masaru Chuba, Yozo Okazaki, Takashi Hashimoto, Akira Oikawa, Hayato Maruyama, Jun Wasaki, Tadao Wagatsuma, Keitaro Tawaraya
Lipidome Profiling of Phosphorus Deficiency-Tolerant Rice Cultivars Reveals Remodeling of Membrane Lipids as a Mechanism of Low P Tolerance. Plants (Basel, Switzerland) 12 (6) (2023)
Tsubasa Shoji, Takashi Hashimoto
A Jasmonate-Responsive ERF Transcription Factor Regulates Steroidal Glycoalkaloid Biosynthesis Genes in Eggplant. Plants (Basel, Switzerland) 11 (23) (2022)
Naoko Yoshimoto, Takashi Asano, Ayuna Kisanuki, Chihiro Kanno, Machiko Asanuma, Mami Yamazaki, Isao Fujii, Takashi Hashimoto
The ability of callus tissues induced from three Allium plants to accumulate health-beneficial natural products, S-alk(en)ylcysteine sulfoxides. Journal of natural medicines 76 (4) (2022)
Tsubasa Shoji, Koki Moriyama, Nicolas Sierro, Sonia Ouadi, Nikolai V Ivanov, Takashi Hashimoto, Takashi Hashimoto
Natural and induced variations in transcriptional regulator genes result in low-nicotine phenotypes in tobacco. The Plant journal : for cell and molecular biology 111 (6) (2022)
Amit Rai, Hideki Hirakawa, Megha Rai, Yohei Shimizu, Kenta Shirasawa, Shinji Kikuchi, Hikaru Seki, Mami Yamazaki, Atsushi Toyoda, Sachiko N Isobe, Toshiya Muranaka, Takashi Hashimoto
Chromosome-scale genome assembly of Glycyrrhiza uralensis revealed metabolic gene cluster centred specialized metabolites biosynthesis. DNA research : an international journal for rapid publication of reports on genes and genomes 29 (6) (2022)
Tsubasa Shoji, Takashi Hashimoto
A Jasmonate-Responsive ERF Transcription Factor Regulates Steroidal Glycoalkaloid Biosynthesis Genes in Eggplant. Plants (Basel, Switzerland) 11 (23) (2022)
Amit Rai, Hideki Hirakawa, Megha Rai, Yohei Shimizu, Kenta Shirasawa, Shinji Kikuchi, Hikaru Seki, Mami Yamazaki, Atsushi Toyoda, Sachiko N Isobe, Toshiya Muranaka, Takashi Hashimoto
Chromosome-scale genome assembly of Glycyrrhiza uralensis revealed metabolic gene cluster centred specialized metabolites biosynthesis. DNA research : an international journal for rapid publication of reports on genes and genomes 29 (6) (2022)
Tsubasa Shoji, Takashi Hashimoto
A Jasmonate-Responsive ERF Transcription Factor Regulates Steroidal Glycoalkaloid Biosynthesis Genes in Eggplant. Plants (Basel, Switzerland) 11 (23) (2022)
Amit Rai, Hideki Hirakawa, Megha Rai, Yohei Shimizu, Kenta Shirasawa, Shinji Kikuchi, Hikaru Seki, Mami Yamazaki, Atsushi Toyoda, Sachiko N Isobe, Toshiya Muranaka, Takashi Hashimoto
Chromosome-scale genome assembly of Glycyrrhiza uralensis revealed metabolic gene cluster centred specialized metabolites biosynthesis. DNA research : an international journal for rapid publication of reports on genes and genomes 29 (6) (2022)
Miyako Kusano, Kanjana Worarad, Atsushi Fukushima, Ken Kamiya, Yuka Mitani, Yozo Okazaki, Yasuhiro Higashi, Ryo Nakabayashi, Makoto Kobayashi, Tetsuya Mori, Tomoko Nishizawa, Yumiko Takebayashi, Mikiko Kojima, Hitoshi Sakakibara, Takashi Hashimoto, Shuhei Hao, Yoshihito Shinozaki, Yoshihiro Okabe, Junji Kimbara, Tohru Ariizumi, Hiroshi Ezura
Transcriptomic, Hormonomic and Metabolomic Analyses Highlighted the Common Modules Related to Photosynthesis, Sugar Metabolism and Cell Division in Parthenocarpic Tomato Fruits during Early Fruit Set. Cells 11 (9) (2022)
Amit Rai, Hideki Hirakawa, Ryo Nakabayashi, Shinji Kikuchi, Koki Hayashi, Megha Rai, Hiroshi Tsugawa, Taiki Nakaya, Tetsuya Mori, Hideki Nagasaki, Runa Fukushi, Yoko Kusuya, Hiroki Takahashi, Hiroshi Uchiyama, Atsushi Toyoda, Shoko Hikosaka, Eiji Goto, Takashi Hashimoto, Mami Yamazaki
Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis. Nature communications 12 (1) (2021)
Saleh Alseekh, Asaph Aharoni, Yariv Brotman, Kevin Contrepois, John Charles D'Auria, Jan Ewald, Jennifer C Ewald, Paul D Fraser, Patrick Giavalisco, Robert D Hall, Matthias Heinemann, Hannes Link, Jie Luo, Steffen Neumann, Jens B Nielsen, Leonardo Perez de Souza, Takashi Hashimoto, Uwe Sauer, Frank C Schroeder, Stefan Schuster, Gary E Siuzdak, Aleksandra Skirycz, Lloyd W Sumner, Michael Paul Snyder, Huiru Tang, Takayuki Tohge, Yulan Wang, Weiwei Wen, Si Wu, Guo-Wang Xu, Nicola Zamboni, Alisdair Robert Fernie
Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nature methods 18 (7) (2021)
Ryosuke Sugiyama, Rui Li, Ayuko Kuwahara, Ryo Nakabayashi, Naoyuki Sotta, Tetsuya Mori, Takehiro Ito, Naoko Ohkama-Ohtsu, Toru Fujiwara, Takashi Hashimoto, Ryohei Thomas Nakano, Paweł Bednarek, Masami Yokota Hirai
Retrograde sulfur flow from glucosinolates to cysteine in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America 118 (22) (2021)
Ryota Akiyama, Bunta Watanabe, Masaru Nakayasu, Hyoung Jae Lee, Junpei Kato, Naoyuki Umemoto, Toshiya Muranaka, Takashi Hashimoto, Yukihiro Sugimoto, Masaharu Mizutani
The biosynthetic pathway of potato solanidanes diverged from that of spirosolanes due to evolution of a dioxygenase. Nature communications 12 (1) (2021)
Megha Rai, Amit Rai, Tetsuya Mori, Ryo Nakabayashi, Manami Yamamoto, Michimi Nakamura, Hideyuki Suzuki, Takashi Hashimoto, Mami Yamazaki
Gene-Metabolite Network Analysis Revealed Tissue-Specific Accumulation of Therapeutic Metabolites in Mallotus japonicus. International journal of molecular sciences 22 (16) (2021)
Hiroshi Tsugawa, Amit Rai, Takashi Hashimoto, Ryo Nakabayashi
Metabolomics and complementary techniques to investigate the plant phytochemical cosmos. Natural product reports 38 (10) (2021)
Miyako Kusano, Atsushi Fukushima, Mayumi Tabuchi-Kobayashi, Kazuhiro Funayama, Soichi Kojima, Kyonoshin Maruyama, Yoshiharu Y Yamamoto, Tomoko Nishizawa, Makoto Kobayashi, Mayumi Wakazaki, Mayuko Sato, Kiminori Toyooka, Kumiko Osanai-Kondo, Yoshinori Utsumi, Motoaki Seki, Chihaya Fukai, Takashi Hashimoto, Tomoyuki Yamaya
Cytosolic GLUTAMINE SYNTHETASE1;1 Modulates Metabolism and Chloroplast Development in Roots. Plant physiology 182 (4) (2020)
Tedrick Thomas Salim Lew, Rajani Sarojam, In-Cheol Jang, Bong Soo Park, Naweed I Naqvi, Min Hao Wong, Gajendra P Singh, Rajeev J Ram, Oded Shoseyov, Takashi Hashimoto, Nam-Hai Chua, Michael S Strano
Species-independent analytical tools for next-generation agriculture. Nature plants 6 (12) (2020)
Soo Yeon Chung, Hikaru Seki, Yukiko Fujisawa, Yoshikazu Shimoda, Susumu Hiraga, Yuhta Nomura, Takashi Hashimoto, Masao Ishimoto, Toshiya Muranaka
A cellulose synthase-derived enzyme catalyses 3-O-glucuronosylation in saponin biosynthesis. Nature communications 11 (1) (2020)
Liza Esther Alexander, Yozo Okazaki, Michael A Schelling, Aeriel Davis, Xiaobin Zheng, Ludmila Rizhsky, Marna D Yandeau-Nelson, Takashi Hashimoto, Basil J Nikolau
Maize Glossy2 and Glossy2-like Genes Have Overlapping and Distinct Functions in Cuticular Lipid Deposition. Plant physiology 183 (3) (2020)
Hiroshi Tsugawa, Kazutaka Ikeda, Mikiko Takahashi, Aya Satoh, Yoshifumi Mori, Haruki Uchino, Nobuyuki Okahashi, Yutaka Yamada, Ipputa Tada, Paolo Bonini, Yasuhiro Higashi, Yozo Okazaki, Zhiwei Zhou, Zheng-Jiang Zhu, Jeremy Koelmel, Tomáš Čajka, Oliver Fiehn, Takashi Hashimoto, Masanori Arita, Makoto Arita
A lipidome atlas in MS-DIAL 4. Nature biotechnology 38 (10) (2020)
Xin Guan, Yozo Okazaki, Rwisdom Zhang, Takashi Hashimoto, Basil J Nikolau
Dual-Localized Enzymatic Components Constitute the Fatty Acid Synthase Systems in Mitochondria and Plastids. Plant physiology 183 (2) (2020)
Toshiyuki Waki, Ryo Mameda, Takuya Nakano, Sayumi Yamada, Miho Terashita, Keisuke Ito, Natsuki Tenma, Yanbing Li, Naoto Fujino, Kaichi Uno, Satoshi Yamashita, Yuichi Aoki, Konstantin Denessiouk, Yosuke Kawai, Satoko Sugawara, Takashi Hashimoto, Keiko Yonekura-Sakakibara, Yasumasa Morita, Atsushi Hoshino, Seiji Takahashi, Toru Nakayama
A conserved strategy of chalcone isomerase-like protein to rectify promiscuous chalcone synthase specificity. Nature communications 11 (1) (2020)
Ryo Nakabayashi, Tetsuya Mori, Noriko Takeda, Kiminori Toyooka, Hiroshi Sudo, Hiroshi Tsugawa, Takashi Hashimoto
Metabolomics with 15N Labeling for Characterizing Missing Monoterpene Indole Alkaloids in Plants. Analytical chemistry 92 (8) (2020)
Hiroshi Tsugawa, Ryo Nakabayashi, Tetsuya Mori, Yutaka Yamada, Mikiko Takahashi, Amit Rai, Ryosuke Sugiyama, Hiroyuki Yamamoto, Taiki Nakaya, Mami Yamazaki, Rik Kooke, Johanna A Bac-Molenaar, Nihal Oztolan-Erol, Joost J B Keurentjes, Masanori Arita, Takashi Hashimoto
A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms. Nature methods 16 (4) (2019)
Hajime Sato, Masanobu Uchiyama, Takashi Hashimoto, Mami Yamazaki
The Energetic Viability of Δ¹-Piperideine Dimerization in Lysine-derived Alkaloid Biosynthesis. Metabolites 8 (3) (2018)
Yasuhiro Higashi, Yozo Okazaki, Kouji Takano, Fumiyoshi Myouga, Kazuo Shinozaki, Eva Knoch, Atsushi Fukushima, Takashi Hashimoto
HEAT INDUCIBLE LIPASE1 Remodels Chloroplastic Monogalactosyldiacylglycerol by Liberating α-Linolenic Acid in Arabidopsis Leaves under Heat Stress. The Plant cell 30 (8) (2018)
Megha Rai, Amit Rai, Noriaki Kawano, Kayo Yoshimatsu, Hiroki Takahashi, Hideyuki Suzuki, Nobuo Kawahara, Takashi Hashimoto, Mami Yamazaki
De Novo RNA Sequencing and Expression Analysis of Aconitum carmichaelii to Analyze Key Genes Involved in the Biosynthesis of Diterpene Alkaloids. Molecules (Basel, Switzerland) 22 (12) (2017)
Xin Guan, Yozo Okazaki, Andrew Lithio, Ling Li, Xuefeng Zhao, Huanan Jin, Daniel S Nettleton, Takashi Hashimoto, Basil J Nikolau
Discovery and Characterization of the 3-Hydroxyacyl-ACP Dehydratase Component of the Plant Mitochondrial Fatty Acid Synthase System. Plant physiology 173 (4) (2017)
Somnuk Bunsupa, Kousuke Hanada, Akira Maruyama, Kaori Aoyagi, Kana Komatsu, Hideki Ueno, Madoka Yamashita, Ryosuke Sasaki, Akira Oikawa, Takashi Hashimoto, Mami Yamazaki
Molecular Evolution and Functional Characterization of a Bifunctional Decarboxylase Involved in Lycopodium Alkaloid Biosynthesis. Plant physiology 171 (4) (2016)
Josh P Clevenger, Jason Van Houten, Michelle Blackwood, Gustavo Rubén Rodríguez, Yusuke Jikumaru, Yuji Kamiya, Miyako Kusano, Takashi Hashimoto, Sofia Visa, Esther van der Knaap
Network Analyses Reveal Shifts in Transcript Profiles and Metabolites That Accompany the Expression of SUN and an Elongated Tomato Fruit. Plant physiology 168 (3) (2015)