Michael Paul Snyder (Michael P Snyder, Michael Snyder)

ORCID

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 98

Top Venues

Nature communications

Nature

Nature medicine

Nature cell biology

Stanford University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Stanford University Jan 1o 2009

United States

Chairman and Professor :: Genetics

Publications

Sanjay Jain, Liming Pei, Jeffrey M Spraggins, Michael Angelo, James P Carson, Nils Gehlenborg, Fiona Ginty, Joana P Gonçalves, James S Hagood, John W Hickey, Neil L Kelleher, Louise C Laurent, Shin Lin, Yiing Lin, Huiping Liu, Alexandra Naba, Ernesto S Nakayasu, Wei-Jun Qian, Andrea J Radtke, Paul Robson, Brent R Stockwell, Raf Van de Plas, Ioannis S Vlachos, Mowei Zhou, null null, Katy Börner, Michael Paul Snyder
Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP). Nature cell biology (2023)
Yashvardhan Jain, Leah L Godwin, Yingnan Ju, Naveksha Sood, Ellen M Quardokus, Andreas Bueckle, Teri Longacre, Aaron Horning, Yiing Lin, Edward D Esplin, John W Hickey, Michael Paul Snyder, Nathan Heath Patterson, Jeffrey M Spraggins, Katy Börner
Segmentation of human functional tissue units in support of a Human Reference Atlas. Communications biology 6 (1) (2023)
Katharina Papsdorf, Jason Wayne Miklas, Amir Hosseini, Matias Cabruja, Christopher S Morrow, Marzia Savini, Yong Yu, Carlos Giovanni Silva-García, Nicole R Haseley, Luke Meraz Murphy, Pallas Yao, Elisa de Launoit, Scott J Dixon, Michael Paul Snyder, Meng C Wang, William B Mair, Anne Brunet
Lipid droplets and peroxisomes are co-regulated to drive lifespan extension in response to mono-unsaturated fatty acids. Nature cell biology (2023)
Tim M G MacKenzie, Rocío Cisneros, Rajan D Maynard, Michael Paul Snyder
Reverse-ChIP Techniques for Identifying Locus-Specific Proteomes: A Key Tool in Unlocking the Cancer Regulome. Cells 12 (14) (2023)
Shuxiao Chen, Bokai Zhu, Sijia Huang, John W Hickey, Kevin Z Lin, Michael Paul Snyder, William J Greenleaf, Garry P Nolan, Nancy R Zhang, Zongming Ma
Integration of spatial and single-cell data across modalities with weakly linked features. Nature biotechnology (2023)
Katharina Papsdorf, Jason Wayne Miklas, Amir Hosseini, Matias Cabruja, Christopher S Morrow, Marzia Savini, Yong Yu, Carlos Giovanni Silva-García, Nicole R Haseley, Luke Meraz Murphy, Pallas Yao, Elisa de Launoit, Scott J Dixon, Michael Paul Snyder, Meng C Wang, William B Mair, Anne Brunet
Lipid droplets and peroxisomes are co-regulated to drive lifespan extension in response to mono-unsaturated fatty acids. Nature cell biology 25 (5) (2023)
Gregory R Smith, Bingqing Zhao, Malene E Lindholm, Archana Natarajan Raja, Mark R Viggars, Hanna Pincas, Nicole R Gay, Yifei Sun, Yongchao Ge, Venugopalan D Nair, James A Sanford, Mary Anne S Amper, Mital Vasoya, Kevin S Smith, Stephen Montgomery, Elena Zaslavsky, Sue C Bodine, Karyn A Esser, Martin J Walsh, Michael Paul Snyder, Stuart C Sealfon, null null
Multiomic identification of key transcriptional regulatory programs during endurance exercise training. bioRxiv : the preprint server for biology (2023)
Xiaotao Shen, Ryan Kellogg, Daniel J Panyard, Nasim Bararpour, Kevin Erazo Castillo, Brittany Lee-McMullen, Alireza Delfarah, Jessalyn Ubellacker, Sara Ahadi, Yael Rosenberg-Hasson, Ariel B Ganz, Kévin Contrepois, Basil Michael, Ian Simms, Chuchu Wang, Daniel Hornburg, Michael Paul Snyder
Multi-omics microsampling for the profiling of lifestyle-associated changes in health. Nature biomedical engineering (2023)
Ashkan Dehghani Zahedani, Arvind Veluvali, Tracey McLaughlin, Nima Aghaeepour, Amir Hosseinian, Saransh Agarwal, Jingyi Ruan, Shital Tripathi, Mark Woodward, Noosheen Hashemi, Michael Paul Snyder
Digital health application integrating wearable data and behavioral patterns improves metabolic health. NPJ digital medicine 6 (1) (2023)
Katharina Papsdorf, Jason Wayne Miklas, Amir Hosseini, Matias Cabruja, Christopher S Morrow, Marzia Savini, Yong Yu, Carlos Giovanni Silva-García, Nicole R Haseley, Luke Meraz Murphy, Pallas Yao, Elisa de Launoit, Scott J Dixon, Michael Paul Snyder, Meng C Wang, William B Mair, Anne Brunet
Lipid droplets and peroxisomes are co-regulated to drive lifespan extension in response to mono-unsaturated fatty acids. Nature cell biology 25 (5) (2023)
Jacquelyn Roger, Feng Xie, Jean Costello, Alice Tang, Jay Liu, Tomiko T Oskotsky, Sarah R Woldemariam, Idit Kosti, Brian Le, Michael Paul Snyder, Dara Torgerson, Gary Shaw, David Stevenson, Aleksandar Rajkovic, M Glymour, Nima Aghaeepour, Hakan Cakmak, Ruth Lathi, Marina Sirota
Leveraging electronic health records to identify risk factors for recurrent pregnancy loss across two medical centers: a case-control study. Research square (2023)
Gregory R Smith, Bingqing Zhao, Malene E Lindholm, Archana Natarajan Raja, Mark R Viggars, Hanna Pincas, Nicole R Gay, Yifei Sun, Yongchao Ge, Venugopalan D Nair, James A Sanford, Mary Anne S Amper, Mital Vasoya, Kevin S Smith, Stephen Montgomery, Elena Zaslavsky, Sue C Bodine, Karyn A Esser, Martin J Walsh, Michael Paul Snyder, Stuart C Sealfon, null null
Multiomic identification of key transcriptional regulatory programs during endurance exercise training. bioRxiv : the preprint server for biology (2023)
John W Hickey, Winston R Becker, Stephanie A Nevins, Aaron Horning, Almudena Espin Perez, Chenchen Zhu, Bokai Zhu, Bei Wei, Roxanne Chiu, Derek C Chen, Daniel L Cotter, Edward D Esplin, Annika K Weimer, Chiara Caraccio, Vishal Venkataraaman, Christian M Schürch, Sarah Black, Maria Brbic, Kaidi Cao, Shuxiao Chen, Weiruo Zhang, Emma Monte, Nancy R Zhang, Zongming Ma, Jure Leskovec, Zhengyan Zhang, Shin Lin, Teri Longacre, Sylvia K Plevritis, Yiing Lin, Garry P Nolan, William J Greenleaf, Michael Paul Snyder
Organization of the human intestine at single-cell resolution. Nature 619 (7970) (2023)
Ellen M Quardokus, Diane C Saunders, Elizabeth McDonough, John W Hickey, Christopher Werlein, Christine Surrette, Presha Rajbhandari, Anna Martinez Casals, Hua Tian, Lisa Lowery, Elizabeth K Neumann, Frida Björklund, Taruna V Neelakantan, Joshua Croteau, Anne E Wiblin, Jeremy Fisher, April J Livengood, Karen G Dowell, Jonathan C Silverstein, Jeffrey M Spraggins, Gloria S Pryhuber, Gail Deutsch, Fiona Ginty, Garry P Nolan, Simon Melov, Danny D Jonigk, Michael A Caldwell, Ioannis S Vlachos, Werner Muller, Nils Gehlenborg, Brent R Stockwell, Emma Lundberg, Michael Paul Snyder, Ronald N Germain, Jeannie M Camarillo, Neil L Kelleher, Katy Börner, Andrea J Radtke
Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging. Nature methods (2023)
Matthias Zilbauer, Kylie Renee James, Mandeep Kaur, Sebastian Pott, Zhixin Li, Albert Burger, Jay R Thiagarajah, Joseph Burclaff, Frode L Jahnsen, Francesca Perrone, Alexander D Ross, Gianluca Matteoli, Nathalie Stakenborg, Tomohisa Sujino, Andreas E Moor, Raquel Bartolomé Casado, Espen S Bækkevold, Ran Zhou, Bingqing Xie, Ken S Lau, Shahida Din, Scott T Magness, Qiuming Yao, Semir Beyaz, Mark J Arends, Alexandre Denadai-Souza, Lori A Coburn, Jellert T Gaublomme, Richard A Baldock, Irene Papatheodorou, José Ordovas-Montañes, Guy E Boeckxstaens, Anna Hupalowska, Sarah A Teichmann, Aviv Regev, Ramnik J Xavier, Alison Simmons, Michael Paul Snyder, Keith T Wilson, null null, null null
A Roadmap for the Human Gut Cell Atlas. Nature reviews. Gastroenterology & hepatology (2023)
Katharina Papsdorf, Jason Wayne Miklas, Amir Hosseini, Matias Cabruja, Christopher S Morrow, Marzia Savini, Yong Yu, Carlos Giovanni Silva-García, Nicole R Haseley, Luke Meraz Murphy, Pallas Yao, Elisa de Launoit, Scott J Dixon, Michael Paul Snyder, Meng C Wang, William B Mair, Anne Brunet
Lipid droplets and peroxisomes are co-regulated to drive lifespan extension in response to mono-unsaturated fatty acids. Nature cell biology 25 (5) (2023)
Gregory R Smith, Bingqing Zhao, Malene E Lindholm, Archana Natarajan Raja, Mark R Viggars, Hanna Pincas, Nicole R Gay, Yifei Sun, Yongchao Ge, Venugopalan D Nair, James A Sanford, Mary Anne S Amper, Mital Vasoya, Kevin S Smith, Stephen Montgomery, Elena Zaslavsky, Sue C Bodine, Karyn A Esser, Martin J Walsh, Michael Paul Snyder, Stuart C Sealfon, null null
Multiomic identification of key transcriptional regulatory programs during endurance exercise training. bioRxiv : the preprint server for biology (2023)
Xiaotao Shen, Ryan Kellogg, Daniel J Panyard, Nasim Bararpour, Kevin Erazo Castillo, Brittany Lee-McMullen, Alireza Delfarah, Jessalyn Ubellacker, Sara Ahadi, Yael Rosenberg-Hasson, Ariel B Ganz, Kévin Contrepois, Basil Michael, Ian Simms, Chuchu Wang, Daniel Hornburg, Michael Paul Snyder
Multi-omics microsampling for the profiling of lifestyle-associated changes in health. Nature biomedical engineering (2023)
Fairlie Reese, Brian A Williams, Gabriela Balderrama-Gutierrez, Dana Wyman, Muhammed Hasan Çelik, Elisabeth Rebboah, Narges Rezaie, Diane Trout, Milad Razavi-Mohseni, Yunzhe Jiang, Beatrice Borsari, Samuel J Morabito, Heidi Yahan Liang, Cassandra J McGill, Sorena Rahmanian, Jasmine Sakr, Shan Jiang, Weihua Zeng, Klebea Carvalho, Annika K Weimer, Louise A Dionne, Ariel McShane, Karan Bedi, Shaimae I Elhajjajy, Sean Upchurch, Jennifer Jou, Ingrid Youngworth, Aditi K Narayanan, Paul Sud, Otto Jolanki, Benjamin C Hitz, Meenakshi S Kagda, Michael Paul Snyder, Benjamin C Hitz, Jill E Moore, Nishigandha Phalke, David A Bennett, Laura G Reinholdt, Mats Ljungman, Michael A Beer, Mark B Gerstein, Lior Pachter, Roderic Guigo, Barbara J Wold, Ali Mortazavi
The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity. bioRxiv : the preprint server for biology (2023)
Daniel Hornburg, Si Wu, Mahdi Moqri, Xin Zhou, Kevin Contrepois, Nasim Bararpour, Gavin M Traber, Baolong Su, Ahmed A Metwally, Monica Avina, Wenyu Zhou, Jessalyn M Ubellacker, Tejaswini Mishra, Sophia Miryam Schüssler-Fiorenza Rose, Paula B Kavathas, Kevin J Williams, Michael Paul Snyder
Dynamic lipidome alterations associated with human health, disease and ageing. Nature metabolism (2023)
Sarasa Isobe, Ramesh V Nair, Helen Y Kang, Lingli Wang, Jan-Renier Moonen, Tsutomu Shinohara, Aiqin Cao, Shalina Taylor, Shoichiro Otsuki, David P Marciano, Rebecca L Harper, Mir Shoebulla Adil, Chongyang Zhang, Mauro Lago-Docampo, Jakob Körbelin, Jesse M Engreitz, Michael Paul Snyder, Marlene Rabinovitch
Reduced FOXF1 links unrepaired DNA damage to pulmonary arterial hypertension. Nature communications 14 (1) (2023)
Manuel Faria, Stella Tan Pei Zin, Roman Chestnov, Anne Marie Novak, Shahar Lev-Ari, Michael Paul Snyder
Mental Health for All: The Case for Investing in Digital Mental Health to Improve Global Outcomes, Access, and Innovation in Low-Resource Settings. Journal of clinical medicine 12 (21) (2023)
Katharina Papsdorf, Jason Wayne Miklas, Amir Hosseini, Matias Cabruja, Christopher S Morrow, Marzia Savini, Yong Yu, Carlos Giovanni Silva-García, Nicole R Haseley, Luke Meraz Murphy, Pallas Yao, Elisa de Launoit, Scott J Dixon, Michael Paul Snyder, Meng C Wang, William B Mair, Anne Brunet
Author Correction: Lipid droplets and peroxisomes are co-regulated to drive lifespan extension in response to mono-unsaturated fatty acids. Nature cell biology (2023)
Mahdi Moqri, Michael Paul Snyder
Organ-specific aging and the risk of chronic diseases. Nature medicine (2023)
Camilo A Espinosa, Waqasuddin Khan, Rasheda Khanam, Sayan Das, Javairia Khalid, Jesmin Pervin, Margaret P Kasaro, Kevin Contrepois, Alan L Chang, Thanaphong Phongpreecha, Basil Michael, Mathew Ellenberger, Usma Mehmood, Aneeta Hotwani, Ambreen Nizar, Furqan Kabir, Ronald J Wong, Martin Becker, Eloise Berson, Anthony Culos, Davide De Francesco, Samson Mataraso, Neal G Ravindra, Melan Thuraiappah, Maria Xenochristou, Ina Annelies Stelzer, Ivana Marié, Arup Dutta, Rubhana Raqib, Salahuddin Ahmed, Sayedur Rahman, A S M Tarik Hasan, Said M Ali, Mohamed H Juma, Monjur Rahman, Shaki Aktar, Saikat Deb, Joan T Price, Paul H Wise, Virginia D Winn, Maurice L Druzin, Ronald S Gibbs, Gary L Darmstadt, Jeffrey C Murray, Jeffrey S A Stringer, Brice L Gaudilliere, Michael Paul Snyder, Martin S Angst, Anisur Rahman, Abdullah H Baqui, Fyezah Jehan, Muhammad Imran Nisar, Bellington Vwalika, Sunil Sazawal, Gary M Shaw, David K Stevenson, Nima Aghaeepour
Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries. Science advances 9 (21) (2023)
Rachel Marty Pyke, Dattatreya Mellacheruvu, Steven Dea, Charles W Abbott, Lee McDaniel, Devayani P Bhave, Simo V Zhang, Eric Levy, Gabor Bartha, John West, Michael Paul Snyder, Richard O Chen, Sean Michael Boyle
A machine learning algorithm with subclonal sensitivity reveals widespread pan-cancer human leukocyte antigen loss of heterozygosity. Nature communications 13 (1) (2022)
Maria Brbic, Kaidi Cao, John W Hickey, Yuqi Tan, Michael Paul Snyder, Garry P Nolan, Jure Leskovec
Annotation of spatially resolved single-cell data with STELLAR. Nature methods 19 (11) (2022)
Graham S Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R Hoerner, Shannon M White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M Brannon, Daniel A Sumano, Raushun A Kirtikar, Alicia A Erwin, Thomas J Metzner, Ryan K C Yuen, Alice C Fan, John T Leppert, Michael A Eberle, Mark B Gerstein, Michael Paul Snyder
Recurrent repeat expansions in human cancer genomes. Nature 613 (7942) (2022)
Graham S Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R Hoerner, Shannon M White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M Brannon, Daniel A Sumano, Raushun A Kirtikar, Alicia A Erwin, Thomas J Metzner, Ryan K C Yuen, Alice C Fan, John T Leppert, Michael A Eberle, Mark B Gerstein, Michael Paul Snyder
Recurrent repeat expansions in human cancer genomes. Nature 613 (7942) (2022)
Winston R Becker, Stephanie A Nevins, Derek C Chen, Roxanne Chiu, Aaron M Horning, Tuhin K Guha, Rozelle Laquindanum, Meredith Mills, Hassan Chaib, Uri Ladabaum, Teri Longacre, Jeanne Shen, Edward D Esplin, Anshul Kundaje, James M Ford, Christina Curtis, Michael Paul Snyder, William J Greenleaf
Single-cell analyses define a continuum of cell state and composition changes in the malignant transformation of polyps to colorectal cancer. Nature genetics 54 (7) (2022)
Kevin Van Bortle, David P Marciano, Qing Liu, Tristan Chou, Andrew M Lipchik, Sanjay Gollapudi, Benjamin S Geller, Emma Monte, Rohinton T Kamakaka, Michael Paul Snyder
A cancer-associated RNA polymerase III identity drives robust transcription and expression of snaR-A noncoding RNA. Nature communications 13 (1) (2022)
Peng Gao, Xiaotao Shen, Xinyue Zhang, Chao Jiang, Sai Zhang, Xin Zhou, Sophia Miryam Schüssler-Fiorenza Rose, Michael Paul Snyder
Precision environmental health monitoring by longitudinal exposome and multi-omics profiling. Genome research 32 (6) (2022)
Md Mobashir Hasan Shandhi, Peter Jaeho Cho, Ali R Roghanizad, Karnika Singh, Will Wang, Oana M Enache, Amanda Stern, Rami Sbahi, Bilge Tatar, Sean Fiscus, Qi Xuan Khoo, Yvonne Kuo, Xiao Lu, Joseph Hsieh, Alena Kalodzitsa, Amir Bahmani, Arash Alavi, Utsab Ray, Michael Paul Snyder, Geoffrey S Ginsburg, Dana K Pasquale, Christopher W Woods, Ryan J Shaw, Jessilyn P Dunn
A method for intelligent allocation of diagnostic testing by leveraging data from commercial wearable devices: a case study on COVID-19. NPJ digital medicine 5 (1) (2022)
Graham S Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R Hoerner, Shannon M White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M Brannon, Daniel A Sumano, Raushun A Kirtikar, Alicia A Erwin, Thomas J Metzner, Ryan K C Yuen, Alice C Fan, John T Leppert, Michael A Eberle, Mark B Gerstein, Michael Paul Snyder
Recurrent repeat expansions in human cancer genomes. Nature 613 (7942) (2022)
Xiaotao Shen, Hong Yan, Chuchu Wang, Peng Gao, Caroline H Johnson, Michael Paul Snyder
TidyMass an object-oriented reproducible analysis framework for LC-MS data. Nature communications 13 (1) (2022)
Jessilyn P Dunn, Mobashir Hasan Shandhi, Peter Cho, Ali Roghanizad, Karnika Singh, Will Wang, Oana Enache, Amanda Stern, Rami Sbahi, Bilge Tatar, Sean Fiscus, Qi Xuan Khoo, Yvonne Kuo, Xiao Lu, Joseph Hsieh, Alena Kalodzitsa, Amir Bahmani, Arash Alavi, Utsab Ray, Michael Paul Snyder, Geoffrey S Ginsburg, Dana K Pasquale, Christopher Woods, Ryan Shaw
A Method for Intelligent Allocation of Diagnostic Testing by Leveraging Data from Commercial Wearable Devices: A Case Study on COVID-19. Research square (2022)
Hannah N De Jong, Frederick E Dewey, Pablo Cordero, Rachelle A Victorio, Anna Kirillova, Yong Huang, Roshni Madhvani, Kinya Seo, Feng Lan, Mark Orcholski, W Robert Liu, Ayca Erbilgin, Matthew T Wheeler, Rui Chen, Stephen Pan, Young M Kim, Krishna Bommakanti, Cherisse A Marcou, J Martijn Bos, Francois Haddad, Michael J Ackerman, Ramachandran S Vasan, Calum A MacRae, Joseph C Wu, Vinicio A de Jesus Perez, Michael Paul Snyder, Victoria N Parikh, Euan A Ashley
Wnt Signaling Interactor WTIP (Wilms Tumor Interacting Protein) Underlies Novel Mechanism for Cardiac Hypertrophy. Circulation. Genomic and precision medicine 15 (4) (2022)
Graham S Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R Hoerner, Shannon M White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M Brannon, Daniel A Sumano, Raushun A Kirtikar, Alicia A Erwin, Thomas J Metzner, Ryan K C Yuen, Alice C Fan, John T Leppert, Michael A Eberle, Mark B Gerstein, Michael Paul Snyder
Recurrent repeat expansions in human cancer genomes. Nature (2022)
Ning Deng, Yue Zhang, Zhihai Ma, Richard Lin, Tzu-Hao Cheng, Hua Tang, Michael Paul Snyder, Stanley N Cohen
DSIF modulates RNA polymerase II occupancy according to template G + C content. NAR genomics and bioinformatics 4 (3) (2022)
Baoxu Pang, Jan H van Weerd, Feija L Hamoen, Michael Paul Snyder
Identification of non-coding silencer elements and their regulation of gene expression. Nature reviews. Molecular cell biology (2022)
Veronica L Li, Yang He, Kevin Contrepois, Hailan Liu, Joon T Kim, Amanda L Wiggenhorn, Julia T Tanzo, Alan Sheng-Hwa Tung, Xuchao Lyu, Peter-James H Zushin, Robert S Jansen, Basil Michael, Kang Yong Loh, Andrew C Yang, Christian S Carl, Christian T Voldstedlund, Wei Wei, Stephanie M Terrell, Benjamin C Moeller, Rick M Arthur, Gareth A Wallis, Koen van de Wetering, Andreas Stahl, Bente Kiens, Erik Arne Richter, Steven M Banik, Michael Paul Snyder, Yong Xu, Jonathan Z Long
An exercise-inducible metabolite that suppresses feeding and obesity. Nature 606 (7915) (2022)
Ekanath Srihari Rangan, Rahul Krishnan Pathinarupothi, Kanwaljeet J S Anand, Michael Paul Snyder
Performance effectiveness of vital parameter combinations for early warning of sepsis-an exhaustive study using machine learning. JAMIA open 5 (4) (2022)
Denis Schapiro, Clarence Yapp, Artem Sokolov, Sheila M Reynolds, Yu-An Chen, Damir Sudar, Yubin Xie, Jeremy L Muhlich, Raquel Arias-Camison, Sarah Arena, Adam J Taylor, Milen Nikolov, Madison Tyler, Jia-Ren Lin, Erik A Burlingame, null null, Young Hwan Chang, Samouil L Farhi, Vesteinn Thorsson, Nithya Venkatamohan, Julia L Drewes, Dana Pe'er, David A Gutman, Markus D Herrmann, Nils Gehlenborg, Peter Bankhead, Joseph T Roland, John M Herndon, Michael Paul Snyder, R Michael Angelo, Garry Nolan, Jason R Swedlow, Nikolaus Schultz, Daniel T Merrick, Sarah A Mazzili, Ethan Cerami, Scott J Rodig, Sandro Santagata, Peter K Sorger
MITI minimum information guidelines for highly multiplexed tissue images. Nature methods 19 (3) (2022)
Isaac Perea-Gil, Timon Seeger, Arne A N Bruyneel, Vittavat Termglinchan, Emma Monte, Esther W Lim, Nirmal Vadgama, Takaaki Furihata, Alexandra A Gavidia, Jennifer Arthur Ataam, Nike Bharucha, Noel Martinez-Amador, Mohamed Ameen, Pooja Nair, Ricardo Serrano, Balpreet Kaur, Dries A M Feyen, Sebastian Diecke, Michael Paul Snyder, Christian M Metallo, Mark Mercola, Ioannis Karakikes
Serine biosynthesis as a novel therapeutic target for dilated cardiomyopathy. European heart journal 43 (36) (2022)
Graham S Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R Hoerner, Shannon M White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M Brannon, Daniel A Sumano, Raushun A Kirtikar, Alicia A Erwin, Thomas J Metzner, Ryan K C Yuen, Alice C Fan, John T Leppert, Michael A Eberle, Mark B Gerstein, Michael Paul Snyder
Recurrent repeat expansions in human cancer genomes. Nature (2022)
Graham S Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R Hoerner, Shannon M White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M Brannon, Daniel A Sumano, Raushun A Kirtikar, Alicia A Erwin, Thomas J Metzner, Ryan K C Yuen, Alice C Fan, John T Leppert, Michael A Eberle, Mark B Gerstein, Michael Paul Snyder
Recurrent repeat expansions in human cancer genomes. Nature 613 (7942) (2022)
Daniel J Panyard, Bing Yu, Michael Paul Snyder
The metabolomics of human aging: Advances, challenges, and opportunities. Science advances 8 (42) (2022)
Lisa S Chow, Robert E Gerszten, Joan M Taylor, Bente Klarlund Pedersen, Henriette van Praag, Scott W Trappe, Mark A Febbraio, Zorina S Galis, Yunling Gao, Jacob M Haus, Ian R Lanza, Carl J Lavie, Chih-Hao Lee, Alejandro Lucia, Cedric Moro, Ambarish Pandey, Jeremy M Robbins, Kristin I Stanford, Alice E Thackray, Saul A Villeda, Matthew J Watt, Ashley Xia, Juleen R Zierath, Bennett P Greenwood, Michael Paul Snyder
Reply to 'Lactate as a major myokine and exerkine'. Nature reviews. Endocrinology 18 (11) (2022)
Dafni A Glinos, Garrett Garborcauskas, Paul J Hoffman, Nava Ehsan, Lihua Jiang, Alper Gokden, Xiaoguang Dai, François Aguet, Kathleen L Brown, Kiran Garimella, Tera Bowers, Maura Costello, Kristin Ardlie, Ruiqi Jian, Nathan R Tucker, Patrick T Ellinor, Eoghan D Harrington, Hua Tang, Michael Paul Snyder, Sissel Juul, Pejman Mohammadi, Daniel G MacArthur, Tuuli Lappalainen, Beryl B Cummings
Transcriptome variation in human tissues revealed by long-read sequencing. Nature 608 (7922) (2022)
Ahmed A Metwally, Tom Zhang, Si Wu, Ryan Kellogg, Wenyu Zhou, Kevin Contrepois, Hua Tang, Michael Paul Snyder
Robust identification of temporal biomarkers in longitudinal omics studies. Bioinformatics (Oxford, England) 38 (15) (2022)
Zhiyun Yu, Xin Zhou, Ziyi Liu, Victor Pastrana-Gomez, Yu Liu, Minzhe Guo, Lei Tian, Timothy J Nelson, Nian Wang, Seema Mital, David Chitayat, Joseph C Wu, Marlene Rabinovitch, Sean M Wu, Michael Paul Snyder, Yifei Miao, Mingxia Gu
KMT2D-NOTCH Mediates Coronary Abnormalities in Hypoplastic Left Heart Syndrome. Circulation research 131 (3) (2022)
Xiaotao Shen, Chuchu Wang, Michael Paul Snyder
massDatabase: utilities for the operation of the public compound and pathway database. Bioinformatics (Oxford, England) 38 (19) (2022)
Yuanwen Jiang, Artem A Trotsyuk, Simiao Niu, Dominic Henn, Kellen Chen, Chien-Chung Shih, Madelyn R Larson, Alana M Mermin-Bunnell, Smiti Mittal, Jian-Cheng Lai, Aref Saberi, Ethan Beard, Serena Jing, Donglai Zhong, Sydney R Steele, Kefan Sun, Tanish Jain, Eric Zhao, Christopher R Neimeth, Willian G Viana, Jing Tang, Dharshan Sivaraj, Jagannath Padmanabhan, Melanie Rodrigues, David P Perrault, Arhana Chattopadhyay, Zeshaan N Maan, Melissa C Leeolou, Clark A Bonham, Sun Hyung Kwon, Hudson C Kussie, Katharina S Fischer, Gurupranav Gurusankar, Kui Liang, Kailiang Zhang, Ronjon Nag, Michael Paul Snyder, Michael Januszyk, Geoffrey C Gurtner, Zhenan Bao
Wireless, closed-loop, smart bandage with integrated sensors and stimulators for advanced wound care and accelerated healing. Nature biotechnology (2022)
Graham S Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R Hoerner, Shannon M White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M Brannon, Daniel A Sumano, Raushun A Kirtikar, Alicia A Erwin, Thomas J Metzner, Ryan K C Yuen, Alice C Fan, John T Leppert, Michael A Eberle, Mark B Gerstein, Michael Paul Snyder
Recurrent repeat expansions in human cancer genomes. Nature 613 (7942) (2022)
Charles W Abbott, Sean M Boyle, Rachel Marty Pyke, Lee D McDaniel, Eric Levy, Fábio C P Navarro, Dattatreya Mellacheruvu, Simo V Zhang, Mengyao Tan, Rose Santiago, Zeid M Rusan, Pamela Milani, Gabor Bartha, Jason Harris, Rena McClory, Michael Paul Snyder, Sekwon Jang, Richard Chen
Prediction of Immunotherapy Response in Melanoma through Combined Modeling of Neoantigen Burden and Immune-Related Resistance Mechanisms. Clinical cancer research : an official journal of the American Association for Cancer Research 27 (15) (2022)
Graham S Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R Hoerner, Shannon M White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M Brannon, Daniel A Sumano, Raushun A Kirtikar, Alicia A Erwin, Thomas J Metzner, Ryan K C Yuen, Alice C Fan, John T Leppert, Michael A Eberle, Mark B Gerstein, Michael Paul Snyder
Recurrent repeat expansions in human cancer genomes. Nature 613 (7942) (2022)
Jan Renier Moonen, James Chappell, Minyi Shi, Tsutomu Shinohara, Dan Li, Maxwell R Mumbach, Fan Zhang, Ramesh V Nair, Joseph Nasser, Daniel H Mai, Shalina Taylor, Lingli Wang, Ross J Metzger, Howard Y Chang, Jesse M Engreitz, Michael Paul Snyder, Marlene Rabinovitch
KLF4 recruits SWI/SNF to increase chromatin accessibility and reprogram the endothelial enhancer landscape under laminar shear stress. Nature communications 13 (1) (2022)
Akshay Sanghi, Joshua J Gruber, Ahmed A Metwally, Lihua Jiang, Warren Reynolds, John B Sunwoo, Lisa Orloff, Howard Y Chang, Maya Kasowski, Michael Paul Snyder
Chromatin accessibility associates with protein-RNA correlation in human cancer. Nature communications 12 (1) (2021)
Michael Wainberg, Roarke A Kamber, Akshay Balsubramani, Robin M Meyers, Nicholas A Sinnott-Armstrong, Daniel Hornburg, Lihua Jiang, Joanne Chan, Ruiqi Jian, Mingxin Gu, Anna Shcherbina, Michael M Dubreuil, Kaitlyn Spees, Wouter Meuleman, Michael Paul Snyder, Michael C Bassik, Anshul Kundaje
A genome-wide atlas of co-essential modules assigns function to uncharacterized genes. Nature genetics 53 (5) (2021)
Edith Heard, Alexander D Johnson, Jan O Korbel, Charles Lee, Michael Paul Snyder, David Sturgill
The X chromosome from telomere to telomere: key achievements and future opportunities. Faculty reviews 10 (2021)
Ashkan Dehghani Zahedani, Solmaz Shariat Torbaghan, Salar Rahili, Kirill Karlin, Darrin Scilley, Riya Thakkar, Maziyar Saberi, Noosheen Hashemi, Dalia Perelman, Nima Aghaeepour, Tracey McLaughlin, Michael Paul Snyder
Improvement in Glucose Regulation Using a Digital Tracker and Continuous Glucose Monitoring in Healthy Adults and Those with Type 2 Diabetes. Diabetes therapy : research, treatment and education of diabetes and related disorders 12 (7) (2021)
Amir Bahmani, Arash Alavi, Thore Buergel, Sushil Upadhyayula, Qiwen Wang, Srinath Krishna Ananthakrishnan, Amir Alavi, Diego Celis, Dan Gillespie, Gregory Young, Ziye Xing, Minh Hoang Huynh Nguyen, Audrey Haque, Ankit Mathur, Josh Payne, Ghazal Mazaheri, Jason Kenichi Li, Pramod Kotipalli, Lisa Liao, Rajat Bhasin, Kexin Cha, Benjamin Rolnik, Alessandra Celli, Orit Dagan-Rosenfeld, Emily Higgs, Wenyu Zhou, Camille Lauren Berry, Katherine Grace Van Winkle, Kevin Contrepois, Utsab Ray, Keith Bettinger, Somalee Datta, Xiao Li, Michael Paul Snyder
A scalable, secure, and interoperable platform for deep data-driven health management. Nature communications 12 (1) (2021)
Saleh Alseekh, Asaph Aharoni, Yariv Brotman, Kevin Contrepois, John Charles D'Auria, Jan Ewald, Jennifer C Ewald, Paul D Fraser, Patrick Giavalisco, Robert D Hall, Matthias Heinemann, Hannes Link, Jie Luo, Steffen Neumann, Jens B Nielsen, Leonardo Perez de Souza, Takashi Hashimoto, Uwe Sauer, Frank C Schroeder, Stefan Schuster, Gary E Siuzdak, Aleksandra Skirycz, Lloyd W Sumner, Michael Paul Snyder, Huiru Tang, Takayuki Tohge, Yulan Wang, Weiwei Wen, Si Wu, Guo-Wang Xu, Nicola Zamboni, Alisdair Robert Fernie
Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nature methods 18 (7) (2021)
Ina Annelies Stelzer, Mohammad S Ghaemi, Xiaoyuan Han, Kazuo Ando, Julien J Hédou, Dorien Feyaerts, Laura S Peterson, Kristen K Rumer, Eileen S Tsai, Edward A Ganio, Dyani K Gaudillière, Amy S Tsai, Benjamin Choisy, Lea P Gaigne, Franck Verdonk, Danielle Jacobsen, Sonia Gavasso, Gavin M Traber, Mathew Ellenberger, Natalie Stanley, Martin Becker, Anthony Culos, Ramin Fallahzadeh, Ronald J Wong, Gary L Darmstadt, Maurice L Druzin, Virginia D Winn, Ronald S Gibbs, Xuefeng B Ling, Karl Sylvester, Brendan Carvalho, Michael Paul Snyder, Gary M Shaw, David K Stevenson, Kevin Contrepois, Martin S Angst, Nima Aghaeepour, Brice L Gaudilliere
Integrated trajectories of the maternal metabolome, proteome, and immunome predict labor onset. Science translational medicine 13 (592) (2021)
Yang Yang, Xiao Li, Zhihai Ma, Chunlin Wang, Qunying Yang, Miranda Byrne-Steele, Rongjian Hong, Qing Min, Gao Zhou, Yong Cheng, Guang Qin, Justin V Youngyunpipatkul, James Badger Wing, Shimon Sakaguchi, Christian Toonstra, Lai-Xi Wang, Jose G Vilches-Moure, Denong Wang, Michael Paul Snyder, Ji-Yang Wang, Jian Han, Leonore A Herzenberg
CTLA-4 expression by B-1a B cells is essential for immune tolerance. Nature communications 12 (1) (2021)
Arash Alavi, Gireesh K Bogu, Meng Wang, Ekanath Srihari Rangan, Andrew W Brooks, Qiwen Wang, Emily Higgs, Alessandra Celli, Tejaswini Mishra, Ahmed A Metwally, Kexin Cha, Peter Knowles, Amir A Alavi, Rajat Bhasin, Shrinivas Panchamukhi, Diego Celis, Tagore Aditya, Alexander Honkala, Benjamin Rolnik, Erika M Hunting, Orit Dagan-Rosenfeld, Arshdeep Chauhan, Jessi W Li, Caroline Bejikian, Vandhana Krishnan, Lettie McGuire, Xiao Li, Amir Bahmani, Michael Paul Snyder
Real-time alerting system for COVID-19 and other stress events using wearable data. Nature medicine (2021)
Julia Arand, H Rosaria Chiang, David Martin, Michael Paul Snyder, Julien Sage, Renee A Reijo Pera, Mark Wossidlo
Tet enzymes are essential for early embryogenesis and completion of embryonic genome activation. EMBO reports (2021)
Jessilyn P Dunn, Łukasz Kidziński, Ryan Runge, Daniel Witt, Jennifer L Hicks, Sophia Miryam Schüssler-Fiorenza Rose, Xiao Li, Amir Bahmani, Scott L Delp, Trevor J Hastie, Michael Paul Snyder
Wearable sensors enable personalized predictions of clinical laboratory measurements. Nature medicine 27 (6) (2021)
Nicholas Cauwenberghs, Mary M Prunicki, František Sabovčik, Dalia Perelman, Kévin Contrepois, Xiao Li, Michael Paul Snyder, Kari Christine Nadeau, Tatiana Kuznetsova, Francois Haddad, Christopher D Gardner
Temporal changes in soluble angiotensin-converting enzyme 2 associated with metabolic health, body composition, and proteome dynamics during a weight loss diet intervention: a randomized trial with implications for the COVID-19 pandemic. The American journal of clinical nutrition 114 (5) (2021)
Ahmed A Metwally, Pranav Mehta, Brian S Johnson, Anvith Nagarjuna, Michael Paul Snyder
COVID-19-Induced New-Onset Diabetes: Trends and Technologies. Diabetes 70 (12) (2021)
John W Hickey, Elizabeth K Neumann, Andrea J Radtke, Jeannie M Camarillo, Rebecca T Beuschel, Alexandre Albanese, Elizabeth McDonough, Julia Hatler, Anne E Wiblin, Jeremy Fisher, Joshua Croteau, Eliza C Small, Anup Sood, Richard M Caprioli, R Michael Angelo, Garry P Nolan, Kwanghun Chung, Stephen M Hewitt, Ronald N Germain, Jeffrey M Spraggins, Emma Lundberg, Michael Paul Snyder, Neil L Kelleher, Sinem K Saka
Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging. Nature methods (2021)
Daniel S Kim, Viviana I Risca, David L Reynolds, James Chappell, Adam J Rubin, Namyoung Jung, Laura K H Donohue, Vanessa Lopez-Pajares, Arwa Kathiria, Minyi Shi, Zhixin Zhao, Harsh Deep, Mahfuza Sharmin, Deepti Rao, Shin Lin, Howard Y Chang, Michael Paul Snyder, William J Greenleaf, Anshul Kundaje, Paul A Khavari
The dynamic, combinatorial cis-regulatory lexicon of epidermal differentiation. Nature genetics 53 (11) (2021)
Amir Bahmani, Kyle Ferriter, Vandhana Krishnan, Arash Alavi, Amir Alavi, Philip S Tsao, Michael Paul Snyder, Cuiping Pan
Swarm: A federated cloud framework for large-scale variant analysis. PLoS computational biology 17 (5) (2021)
Alessandra Breschi, Dalia Perelman, Michael Paul Snyder
Response to Hulman and colleagues regarding "Glucotypes reveal new patterns of glucose dysregulation". PLoS biology 19 (3) (2021)
Dóra Tombácz, Gábor Torma, Gábor Gulyás, Norbert Moldovan, Michael Paul Snyder, Zsolt Boldogkői
Meta-analytic approach for transcriptome profiling of herpes simplex virus type 1. Scientific data 7 (1) (2020)
M Reza Sailani, Ahmed A Metwally, Wenyu Zhou, Sophia Miryam Schüssler-Fiorenza Rose, Sara Ahadi, Kevin Contrepois, Tejaswini Mishra, Martin Jinye Zhang, Łukasz Kidziński, Theodore J Chu, Michael Paul Snyder
Deep longitudinal multiomics profiling reveals two biological seasonal patterns in California. Nature communications 11 (1) (2020)
M Reza Sailani, Fereshteh Jahanbani, Charles W Abbott, Hayan Lee, Amin Zia, Shannon Rego, Juliane Winkelmann, Franziska Hopfner, Tahir N Khan, Nicholas Katsanis, Stefanie H Müller, Daniela Berg, Katherine M Lyman, Christian Mychajliw, Günther Deuschl, Jonathan A Bernstein, Gregor Kuhlenbäumer, Michael Paul Snyder
Candidate variants in TUB are associated with familial tremor. PLoS genetics 16 (9) (2020)
Subash Adhikari, Edouard C Nice, Eric W Deutsch, Lydie Lane, Gilbert S Omenn, Stephen R Pennington, Young-Ki Paik, Christopher M Overall, Fernando J Corrales, Ileana M Cristea, Jennifer E Van Eyk, Mathias Uhlen, Cecilia Lindskog, Daniel W Chan, Amos Bairoch, James C Waddington, Joshua L Justice, Joshua LaBaer, Henry Rodriguez, Fuchu He, Markus Kostrzewa, Peipei Ping, Rebekah L Gundry, Peter Stewart, Sanjeeva Srivastava, Sudhir Srivastava, Fabio C S Nogueira, Gilberto B Domont, Yves Vandenbrouck, Maggie P Y Lam, Sara Wennersten, Juan Antonio Vizcaino, Marc R Wilkins, Jochen M Schwenk, Emma Lundberg, Nuno Bandeira, Gyorgy Marko-Varga, Susan T Weintraub, Charles Pineau, Ulrike Kusebauch, Robert L Moritz, Seong Beom Ahn, Magnus Palmblad, Michael Paul Snyder, Ruedi Aebersold, Mark S Baker
A high-stringency blueprint of the human proteome. Nature communications 11 (1) (2020)
null null, Michael Paul Snyder, Thomas R Gingeras, Jill E Moore, Zhiping Weng, Mark B Gerstein, Bing Ren, Ross Cameron Hardison, John A Stamatoyannopoulos, Brenton R Graveley, Elise A Feingold, Michael J Pazin, Michael Pagan, Daniel A Gilchrist, Benjamin C Hitz, J Michael Cherry, Bradley E Bernstein, Eric M Mendenhall, Daniel R Zerbino, Adam Frankish, Paul Flicek, Richard M Myers
Perspectives on ENCODE. Nature 583 (7818) (2020)
Baoxu Pang, Michael Paul Snyder
Systematic identification of silencers in human cells. Nature genetics 52 (3) (2020)
Wei Cao, Hayan Lee, Wei Wu, Aubhishek Zaman, Sean McCorkle, Ming Yan, Justin Chen, Qinghe Xing, Nicholas A Sinnott-Armstrong, Hongen Xu, M Reza Sailani, Wenxue Tang, Yuanbo Cui, Jia Liu, Hongyan Guan, Pengju Lv, Xiaoyan Sun, Lei Sun, Pengli Han, Yanan Lou, Jing Chang, Jinwu Wang, Yuchi Gao, Jiancheng Guo, Gundolf Schenk, Alan Hunter Shain, Fred G Biddle, Eric Collisson, Michael Paul Snyder, Trever G Bivona
Multi-faceted epigenetic dysregulation of gene expression promotes esophageal squamous cell carcinoma. Nature communications 11 (1) (2020)
Jing Zhang, Donghoon Lee, Vineet Dhiman, Peng Jiang, Jie Xu, Patrick McGillivray, Hongbo Yang, Jason Liu, William Meyerson, Declan Clarke, Mengting Gu, Shantao Li, Shaoke Lou, Jinrui Xu, Lucas Lochovsky, Matthew Ung, Lijia Ma, Shan Yu, Qin Cao, Arif O Harmanci, Koon-Kiu Yan, Anurag Sethi, Gamze Gürsoy, Michael Rutenberg Schoenberg, Joel Rozowsky, Jonathan Warrell, Prashant Emani, Yucheng T Yang, Timur Galeev, Xiangmeng Kong, Shuang Liu, Xiaotong Li, Jayanth Krishnan, Yanlin Feng, Juan Carlos Rivera-Mulia, Jessica Adrian, James R Broach, Michael Bolt, Jennifer Moran, Dominic Fitzgerald, Vishnu Dileep, Tingting Liu, Shenglin Mei, Takayo Sasaki, Claudia Trevilla-Garcia, Su Wang, Yanli Wang, Chongzhi Zang, Daifeng Wang, Robert J Klein, Michael Paul Snyder, David M Gilbert, Kevin Y Yip, Chao Cheng, Feng Yue, X Shirley Liu, Kevin P White, Mark B Gerstein
An integrative ENCODE resource for cancer genomics. Nature communications 11 (1) (2020)
Ousmane H Cissé, Liang Ma, Chao Jiang, Michael Paul Snyder, Joseph A Kovacs
Humans Are Selectively Exposed to Pneumocystis jirovecii. mBio 11 (2) (2020)
null null, Jill E Moore, Michael J Purcaro, Henry E Pratt, Charles B Epstein, Noam Shoresh, Jessika Adrian, Trupti Kawli, Carrie A Davis, Alexander Dobin, Rajinder Kaul, Jessica Halow, Eric L Van Nostrand, Peter Freese, David U Gorkin, Yin Shen, Yupeng He, Mark Mackiewicz, Florencia Pauli-Behn, Brian A Williams, Ali Mortazavi, Cheryl A Keller, Xiao-Ou Zhang, Shaimae I Elhajjajy, Jack Huey, Diane E Dickel, Valentina Snetkova, Xintao Wei, Xiaofeng Wang, Juan Carlos Rivera-Mulia, Joel Rozowsky, Jing Zhang, Surya B Chhetri, Jialing Zhang, Alec Victorsen, Kevin P White, Axel Visel, Gene W Yeo, Christopher B Burge, Eric Lécuyer, David M Gilbert, Job Dekker, John L Rinn, Eric M Mendenhall, Joseph R Ecker, Manolis Kellis, Robert J Klein, William S Noble, Anshul Kundaje, Roderic Guigó, Peggy J Farnham, J Michael Cherry, Richard M Myers, Bing Ren, Brenton R Graveley, Mark B Gerstein, Len A Pennacchio, Michael Paul Snyder, Bradley E Bernstein, Barbara Wold, Ross Cameron Hardison, Thomas R Gingeras, John A Stamatoyannopoulos, Nishigandha Phalke
Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature 583 (7818) (2020)
Sara Ahadi, Wenyu Zhou, Sophia Miryam Schüssler-Fiorenza Rose, M Reza Sailani, Kevin Contrepois, Monika Avina, Melanie Ashland, Anne Brunet, Michael Paul Snyder
Personal aging markers and ageotypes revealed by deep longitudinal profiling. Nature medicine 26 (1) (2020)
Fabian Grubert, Rohith Srivas, Damek V Spacek, Maya Kasowski, Mariana Ruiz-Velasco, Nasa Sinnott-Armstrong, Peyton Greenside, Anil Narasimha, Qing Liu, Benjamin Geller, Akshay Sanghi, Michael Kulik, Silin Sa, Marlene Rabinovitch, Anshul Kundaje, Stephen Dalton, Judith Barbara Zaugg, Michael Paul Snyder
Landscape of cohesin-mediated chromatin loops in the human genome. Nature 583 (7818) (2020)
Armando Reyes-Palomares, Mingxia Gu, Fabian Grubert, Ivan Berest, Silin Sa, Maya Kasowski, Christian Arnold, Mao Shuai, Rohith Srivas, Simon Miao, Dan Li, Michael Paul Snyder, Marlene Rabinovitch, Judith Barbara Zaugg
Remodeling of active endothelial enhancers is associated with aberrant gene-regulatory networks in pulmonary arterial hypertension. Nature communications 11 (1) (2020)
Andrew C Yang, Marc Y Stevens, Michelle B Chen, Davis P Lee, Daniel Stähli, David Gate, Kevin Contrepois, Winnie Chen, Tal Iram, Lichao Zhang, Ryan T Vest, Aisling Chaney, Benoit Lehallier, Niclas E Olsson, Haley du Bois, Ryan Hsieh, Haley C Cropper, Daniela Berdnik, Lulin Li, Elizabeth Y Wang, Gavin M Traber, Carolyn R Bertozzi, Jian Luo, Michael Paul Snyder, Joshua E Elias, Stephen R Quake, Michelle L James, Tony Wyss-Coray
Physiological blood-brain transport is impaired with age by a shift in transcytosis. Nature 583 (7816) (2020)
Tejaswini Mishra, Meng Wang, Ahmed A Metwally, Gireesh K Bogu, Andrew W Brooks, Amir Bahmani, Arash Alavi, Alessandra Celli, Emily Higgs, Orit Dagan-Rosenfeld, Bethany Fay, Susan Kirkpatrick, Ryan Kellogg, Michelle Gibson, Tao Wang, Erika M Hunting, Petra Mamic, Ariel B Ganz, Benjamin Rolnik, Xiao Li, Michael Paul Snyder
Pre-symptomatic detection of COVID-19 from smartwatch data. Nature biomedical engineering 4 (12) (2020)
Sophia Miryam Schüssler-Fiorenza Rose, Kevin Contrepois, Kegan J Moneghetti, Wenyu Zhou, Tejaswini Mishra, Samson Mataraso, Orit Dagan-Rosenfeld, Ariel B Ganz, Jessilyn Dunn, Daniel Hornburg, Shannon Rego, Dalia Perelman, Sara Ahadi, M Reza Sailani, Yanjiao Zhou, Shana R Leopold, Jieming Chen, Melanie Ashland, Jeffrey W Christle, Monika Avina, Patricia Limcaoco, Camilo Ruiz, Marilyn Tan, Atul Janardhan Butte, George M Weinstock, Theodore F Robles, Erica Sodergren, Tracey L McLaughlin, Francois Haddad, Michael Paul Snyder
A longitudinal big data approach for precision health. Nature medicine 25 (5) (2019)
Volodymyr Kuleshov, Jialin Ding, Christopher Vo, Braden Hancock, Alexander Ratner, Yang I Li, Christopher Ré, Serafim Batzoglou, Michael Paul Snyder
A machine-compiled database of genome-wide association studies. Nature communications 10 (1) (2019)
Dóra Tombácz, Zoltán Maróti, Kalmár Tibor, Miklós Palkovits, Michael Paul Snyder, Zsolt Boldogkői
Whole-exome sequencing data of suicide victims who had suffered from major depressive disorder. Scientific data 6 (2019)
Xiyan Li, Xin Wang, Michael Paul Snyder
Metformin Affects Heme Function as a Possible Mechanism of Action. G3 (Bethesda, Md.) 9 (2) (2019)
Josh Tycko, Michael Wainberg, Georgi K Marinov, Oana Ursu, Gaelen T Hess, Braeden K Ego, null Aradhana, Amy Li, Alisa Truong, Alexandro E Trevino, Kaitlyn Spees, David Yao, Irene M Kaplow, Peyton G Greenside, David W Morgens, Douglas H Phanstiel, Michael Paul Snyder, Lacramioara Bintu, William J Greenleaf, Anshul Kundaje, Michael C Bassik
Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements. Nature communications 10 (1) (2019)
M Reza Sailani, Jens Frey Halling, Henrik Devitt Møller, Hayan Lee, Peter Plomgaard, Henriette Pilegaard, Michael Paul Snyder, Birgitte Regenberg
Lifelong physical activity is associated with promoter hypomethylation of genes involved in metabolism, myogenesis, contractile properties and oxidative stress resistance in aged human skeletal muscle. Scientific reports 9 (1) (2019)
Rui Chen, Lin Xia, Kailing Tu, Meixue Duan, Kimberly Kukurba, Jennifer Li-Pook-Than, Dan Xie, Michael Paul Snyder
Longitudinal personal DNA methylome dynamics in a human with a chronic condition. Nature medicine 24 (12) (2018)
Zsolt Boldogkői, Attila Szűcs, Zsolt Balázs, Donald Sharon, Michael Paul Snyder, Dóra Tombácz
Transcriptomic study of Herpes simplex virus type-1 using full-length sequencing techniques. Scientific data 5 (2018)
Kevin Contrepois, Salah Mahmoudi, Baljit K Ubhi, Katharina Papsdorf, Daniel Hornburg, Anne Brunet, Michael Paul Snyder
Cross-Platform Comparison of Untargeted and Targeted Lipidomics Approaches on Aging Mouse Plasma. Scientific reports 8 (1) (2018)

Michael Paul Snyder.css-eqlu8i{font-size:small;padding-left:4px;} (Michael P Snyder, Michael Snyder)

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Michael Paul Snyder (Michael P Snyder, Michael Snyder)