Ke Xu

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 88

Top Venues

Journal of the American Chemical Society

Nano letters

bioRxiv : the preprint server for biology

Proceedings of the National Academy of Sciences of the United States of America

University of California Berkeley

California Institute of Technology (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California Berkeley Jul 01 2013

United States

Assistant Professor and Chevron Chair in Chemistry :: Department of Chemistry

Harvard University Oct 01 2009 - Jul 15 2013

United States

Postdoc :: Chemistry and Chemical Biology

Education History

California Institute of Technology Sep 10 2004 - Jun 13 2009

United States

PHD :: Chemistry

Tsinghua University Sep 01 2000 - Jul 01 2004

China

BSC :: Chemistry

Publications

Alexander A Choi, Ke Xu
Single-Molecule Diffusivity Quantification Unveils Ubiquitous Net Charge-Driven Protein-Protein Interaction. Journal of the American Chemical Society 146 (15) (2024)
Megan A Steves, Ke Xu
Mapping super-resolution image quality. Light, science & applications 13 (1) (2024)
Bret A Unger, Chun Ying Wu, Alexander A Choi, Changdong He, Ke Xu
Hypersensitivity of the vimentin cytoskeleton to net-charge states and Coulomb repulsion. bioRxiv : the preprint server for biology (2024)
Hee-Jeong Cha, Changdong He, Dominic J Glover, Ke Xu, Douglas S Clark
STORM Super-Resolution Visualization of Self-Assembled γPFD Chaperone Ultrastructures in Methanocaldococcus jannaschii . Nano letters 24 (20) (2024)
Alexander A Choi, Ke Xu
Single-Molecule Diffusivity Quantification Unveils Ubiquitous Net Charge-Driven Protein-Protein Interaction. Journal of the American Chemical Society (2024)
Kevin M Rose, Tyler Jepson, Sankalp Shukla, Alex Maya-Romero, Martin Edward Kampmann, Ke Xu, James H Hurley
Tau fibrils induce nanoscale membrane damage and nucleate cytosolic tau at lysosomes. Proceedings of the National Academy of Sciences of the United States of America 121 (22) (2024)
Kevin M Rose, Tyler Jepson, Sankalp Shukla, Alex Maya-Romero, Martin Edward Kampmann, Ke Xu, James H Hurley
Tau fibrils induce nanoscale membrane damage and nucleate cytosolic tau at lysosomes. Proceedings of the National Academy of Sciences of the United States of America 121 (22) (2024)
Alexander A Choi, Ke Xu
Single-Molecule Diffusivity Quantification Unveils Ubiquitous Net Charge-Driven Protein-Protein Interaction. Journal of the American Chemical Society (2024)
Chenglong Xia, David Colognori, Xueyang Jiang, Ke Xu, Jennifer A Doudna
Single-molecule live-cell RNA imaging with CRISPR-Csm. bioRxiv : the preprint server for biology (2024)
Hee-Jeong Cha, Changdong He, Dominic J Glover, Ke Xu, Douglas S Clark
STORM Super-Resolution Visualization of Self-Assembled γPFD Chaperone Ultrastructures in Methanocaldococcus jannaschii . Nano letters (2024)
Megan A Steves, Ke Xu
Mapping super-resolution image quality. Light, science & applications 13 (1) (2024)
Bret A Unger, Chun Ying Wu, Alexander A Choi, Changdong He, Ke Xu
Hypersensitivity of the vimentin cytoskeleton to net-charge states and Coulomb repulsion. bioRxiv : the preprint server for biology (2024)
Hee-Jeong Cha, Changdong He, Dominic J Glover, Ke Xu, Douglas S Clark
STORM Super-Resolution Visualization of Self-Assembled γPFD Chaperone Ultrastructures in Methanocaldococcus jannaschii . Nano letters 24 (20) (2024)
Megan A Steves, Ke Xu
Mapping super-resolution image quality. Light, science & applications 13 (1) (2024)
Alexander A Choi, Ke Xu
Single-Molecule Diffusivity Quantification Unveils Ubiquitous Net Charge-Driven Protein-Protein Interaction. Journal of the American Chemical Society 146 (15) (2024)
Chenglong Xia, David Colognori, Xueyang Jiang, Ke Xu, Jennifer A Doudna
Single-molecule live-cell RNA imaging with CRISPR-Csm. bioRxiv : the preprint server for biology (2024)
Alexander A Choi, Ke Xu
Single-Molecule Diffusivity Quantification Unveils Ubiquitous Net Charge-Driven Protein-Protein Interaction. Journal of the American Chemical Society 146 (15) (2024)
Hee-Jeong Cha, Changdong He, Dominic J Glover, Ke Xu, Douglas S Clark
STORM Super-Resolution Visualization of Self-Assembled γPFD Chaperone Ultrastructures in Methanocaldococcus jannaschii . Nano letters 24 (20) (2024)
Alexander A Choi, Coral Y Zhou, Ayana Tabo, Rebecca Heald, Ke Xu
Single-molecule diffusivity quantification in Xenopus egg extracts elucidates physicochemical properties of the cytoplasm. bioRxiv : the preprint server for biology (2024)
Kevin M Rose, Tyler Jepson, Sankalp Shukla, Alex Maya-Romero, Martin Edward Kampmann, Ke Xu, James H Hurley
Tau fibrils induce nanoscale membrane damage and nucleate cytosolic tau at lysosomes. Proceedings of the National Academy of Sciences of the United States of America 121 (22) (2024)
Kevin M Rose, Tyler Jepson, Sankalp Shukla, Alex Maya-Romero, Martin Edward Kampmann, Ke Xu, James H Hurley
Tau fibrils induce nanoscale membrane damage and nucleate cytosolic tau at lysosomes. Proceedings of the National Academy of Sciences of the United States of America 121 (22) (2024)
Kevin M Rose, Tyler Jepson, Sankalp Shukla, Alex Maya-Romero, Martin Edward Kampmann, Ke Xu, James H Hurley
Tau fibrils induce nanoscale membrane damage and nucleate cytosolic tau at lysosomes. Proceedings of the National Academy of Sciences of the United States of America 121 (22) (2024)
Alexander A Choi, Ke Xu
Single-Molecule Diffusivity Quantification Unveils Ubiquitous Net Charge-Driven Protein-Protein Interaction. Journal of the American Chemical Society 146 (15) (2024)
Kevin M Rose, Tyler Jepson, Sankalp Shukla, Alex Maya-Romero, Martin Edward Kampmann, Ke Xu, James H Hurley
Tau fibrils induce nanoscale membrane damage and nucleate cytosolic tau at lysosomes. Proceedings of the National Academy of Sciences of the United States of America 121 (22) (2024)
Alexander A Choi, Limin Xiang, Wan Li, Ke Xu
Single-molecule displacement mapping indicates unhindered intracellular diffusion of small (<~1 kDa) solutes. bioRxiv : the preprint server for biology (2023)
Limin Xiang, Rui Yan, Kun Chen, Wan Li, Ke Xu
Single-Molecule Displacement Mapping Unveils Sign-Asymmetric Protein Charge Effects on Intraorganellar Diffusion. Nano letters 23 (5) (2023)
Ha H Park, Bowen Wang, Suhong Moon, Tyler Jepson, Ke Xu
Machine-learning-powered extraction of molecular diffusivity from single-molecule images for super-resolution mapping. Communications biology 6 (1) (2023)
Ha H Park, Alexander A Choi, Ke Xu
Size-Dependent Suppression of Molecular Diffusivity in Expandable Hydrogels: A Single-Molecule Study. The journal of physical chemistry. B (2023)
Limin Xiang, Rui Yan, Kun Chen, Wan Li, Ke Xu
Single-molecule displacement mapping unveils sign-asymmetric protein charge effects on intraorganellar diffusion. bioRxiv : the preprint server for biology (2023)
Kevin Rose, Tyler Jepson, Sankalp Shukla, Alex Maya-Romero, Martin Edward Kampmann, Ke Xu, James H Hurley
Tau fibrils induce nanoscale membrane damage and nucleate cytosolic tau at lysosomes. bioRxiv : the preprint server for biology (2023)
Changdong He, Chun Ying Wu, Wan Li, Ke Xu
Multidimensional Super-Resolution Microscopy Unveils Nanoscale Surface Aggregates in the Aging of FUS Condensates. Journal of the American Chemical Society (2023)
Rongfeng Yuan, Trevor D Roberts, Rafaela M Brinn, Alexander A Choi, Ha H Park, Chang Yan, Justin C Ondry, Siamak Khorasani, David J Masiello, Ke Xu, Armand Paul Alivisatos, Naomi S Ginsberg
A composite electrodynamic mechanism to reconcile spatiotemporally resolved exciton transport in quantum dot superlattices. Science advances 9 (42) (2023)
Limin Xiang, Rui Yan, Kun Chen, Wan Li, Ke Xu
Single-Molecule Displacement Mapping Unveils Sign-Asymmetric Protein Charge Effects on Intraorganellar Diffusion. Nano letters 23 (5) (2023)
Changdong He, Chun Ying Wu, Wan Li, Ke Xu
Multidimensional super-resolution microscopy unveils nanoscale surface aggregates in the aging of FUS condensates. bioRxiv : the preprint server for biology (2023)
Limin Xiang, Rui Yan, Kun Chen, Wan Li, Ke Xu
Single-molecule displacement mapping unveils sign-asymmetric protein charge effects on intraorganellar diffusion. bioRxiv : the preprint server for biology (2023)
Alexander A Choi, Limin Xiang, Wan Li, Ke Xu
Single-Molecule Displacement Mapping Indicates Unhindered Intracellular Diffusion of Small (≲1 kDa) Solutes. Journal of the American Chemical Society (2023)
Limin Xiang, Rui Yan, Kun Chen, Wan Li, Ke Xu
Single-Molecule Displacement Mapping Unveils Sign-Asymmetric Protein Charge Effects on Intraorganellar Diffusion. Nano letters 23 (5) (2023)
Limin Xiang, Rui Yan, Kun Chen, Wan Li, Ke Xu
Single-Molecule Displacement Mapping Unveils Sign-Asymmetric Protein Charge Effects on Intraorganellar Diffusion. Nano letters (2023)
Ha H Park, Bowen Wang, Suhong Moon, Tyler Jepson, Ke Xu
Machine-learning-powered extraction of molecular diffusivity from single-molecule images for super-resolution mapping. Communications biology 6 (1) (2023)
Ha H Park, Bowen Wang, Suhong Moon, Tyler Jepson, Ke Xu
Machine-learning-powered extraction of molecular diffusivity from single-molecule images for super-resolution mapping. Communications biology 6 (1) (2023)
Limin Xiang, Rui Yan, Kun Chen, Wan Li, Ke Xu
Single-molecule displacement mapping unveils sign-asymmetric protein charge effects on intraorganellar diffusion. bioRxiv : the preprint server for biology (2023)
Limin Xiang, Rui Yan, Kun Chen, Wan Li, Ke Xu
Single-Molecule Displacement Mapping Unveils Sign-Asymmetric Protein Charge Effects on Intraorganellar Diffusion. Nano letters (2023)
Wojciech Mikołaj Śmigiel, Luca Mantovanelli, Dmitrii S Linnik, Michiel Punter, Jakob M Silberberg, Limin Xiang, Ke Xu, Bert Poolman
Protein diffusion in Escherichia coli cytoplasm scales with the mass of the complexes and is location dependent. Science advances 8 (32) (2022)
Bowen Wang, Michael Xiong, Josephine Susanto, Xue Li, Wai-Yee Leung, Ke Xu
Transforming Rhodamine Dyes for (d)STORM Super-Resolution Microscopy via 1,3-Disubstituted Imidazolium Substitution. Angewandte Chemie (International ed. in English) 61 (9) (2022)
Ilya O Aparin, Rui Yan, Rémi Pelletier, Alexander A Choi, Dmytro I Danylchuk, Ke Xu, Andrey S Klymchenko
Fluorogenic Dimers as Bright Switchable Probes for Enhanced Super-Resolution Imaging of Cell Membranes. Journal of the American Chemical Society 144 (39) (2022)
Kun Chen, Wan Li, Ke Xu
Super-multiplexing excitation spectral microscopy with multiple fluorescence bands. Biomedical optics express 13 (11) (2022)
Bowen Wang, Zhiheng Zhao, Michael Xiong, Rui Yan, Ke Xu
The endoplasmic reticulum adopts two distinct tubule forms. Proceedings of the National Academy of Sciences of the United States of America 119 (18) (2022)
Kun Chen, Wan Li, Ke Xu
Super-multiplexing excitation spectral microscopy with multiple fluorescence bands. Biomedical optics express 13 (11) (2022)
Yunqi Li, Bowen Wang, Wan Li, Ke Xu
Dynamic, Spontaneous Blistering of Substrate-Supported Graphene in Acidic Solutions. ACS nano 16 (4) (2022)
Meiyan Jin, Cyna R Shirazinejad, Bowen Wang, Amy Yan, Johannes Schöneberg, Srigokul Upadhyayula, Ke Xu, David G Drubin
Branched actin networks are organized for asymmetric force production during clathrin-mediated endocytosis in mammalian cells. Nature communications 13 (1) (2022)
Zachary L Newman, Dariya Bakshinskaya, Ryan Schultz, Samuel J Kenny, Seonah Moon, Krishan Aghi, Cherise Stanley, Nadia Marnani, Rachel Li, Julia Bleier, Ke Xu, Ehud Y Isacoff
Determinants of synapse diversity revealed by super-resolution quantal transmission and active zone imaging. Nature communications 13 (1) (2022)
Alexander A Choi, Ha H Park, Kun Chen, Rui Yan, Wan Li, Ke Xu
Displacement Statistics of Unhindered Single Molecules Show no Enhanced Diffusion in Enzymatic Reactions. Journal of the American Chemical Society 144 (11) (2022)
Ruilin Tian, Anthony Abarientos, Jason Hong, Sayed Hadi Hashemi, Rui Yan, Nina Dräger, Kun Leng, Mike A Nalls, Andrew B Singleton, Ke Xu, Faraz Faghri, Martin Edward Kampmann
Genome-wide CRISPRi/a screens in human neurons link lysosomal failure to ferroptosis. Nature neuroscience 24 (7) (2021)
Wan Li, Yunqi Li, Ke Xu
Facile, Electrochemical Chlorination of Graphene from an Aqueous NaCl Solution. Nano letters 21 (2) (2021)
Limin Xiang, Kun Chen, Ke Xu
Single Molecules Are Your Quanta: A Bottom-Up Approach toward Multidimensional Super-resolution Microscopy. ACS nano (2021)
Kun Chen, Rui Yan, Limin Xiang, Ke Xu
Excitation spectral microscopy for highly multiplexed fluorescence imaging and quantitative biosensing. Light, science & applications 10 (1) (2021)
Shulin Li, Rui Yan, Jialu Xu, Shiqun Zhao, Xinyu Ma, Qiming Sun, Min Zhang, Ying Li, Jun-Jie Gogo Liu, Liangyi Chen, Sai Li, Ke Xu, Liang Ge
A new type of ERGIC-ERES membrane contact mediated by TMED9 and SEC12 is required for autophagosome biogenesis. Cell research (2021)
Seonah Moon, Wan Li, Meghan Hauser, Ke Xu
Graphene-Enabled, Spatially Controlled Electroporation of Adherent Cells for Live-Cell Super-resolution Microscopy. ACS nano 14 (5) (2020)
Kayla J Wolf, Poojan Shukla, Kelsey Springer, Stacey Lee, Jason D Coombes, Caleb J Choy, Samuel J Kenny, Ke Xu, Sanjay Kumar
A mode of cell adhesion and migration facilitated by CD44-dependent microtentacles. Proceedings of the National Academy of Sciences of the United States of America 117 (21) (2020)
Xiaoyan Guo, Giovanni Aviles, Yi Liu, Ruilin Tian, Bret A Unger, Yu-Hsiu Tony Lin, Arun P Wiita, Ke Xu, M Almira Correia, Martin Edward Kampmann
Mitochondrial stress is relayed to the cytosol by an OMA1-DELE1-HRI pathway. Nature 579 (7799) (2020)
Rui Yan, Kun Chen, Ke Xu
Probing Nanoscale Diffusional Heterogeneities in Cellular Membranes through Multidimensional Single-Molecule and Super-Resolution Microscopy. Journal of the American Chemical Society 142 (44) (2020)
Limin Xiang, Kun Chen, Rui Yan, Wan Li, Ke Xu
Single-molecule displacement mapping unveils nanoscale heterogeneities in intracellular diffusivity. Nature methods 17 (5) (2020)
Trevor D Roberts, Rongfeng Yuan, Limin Xiang, Milan Delor, Ravi Pokhrel, Ke Yang, Emad Aqad, Tomas Marangoni, Peter Trefonas, Ke Xu, Naomi S Ginsberg
Direct Correlation of Single-Particle Motion to Amorphous Microstructural Components of Semicrystalline Poly(ethylene oxide) Electrolytic Films. The journal of physical chemistry letters 11 (12) (2020)
Wan Li, Michal Wojcik, Ke Xu
Optical Microscopy Unveils Rapid, Reversible Electrochemical Oxidation and Reduction of Graphene. Nano letters 19 (2) (2019)
Yunqi Li, Wan Li, Michal Wojcik, Bowen Wang, Liang-Chun Lin, Markus B Raschke, Ke Xu
Light-Assisted Diazonium Functionalization of Graphene and Spatial Heterogeneities in Reactivity. The journal of physical chemistry letters 10 (17) (2019)
Wan Li, Yunqi Li, Ke Xu
Azidated Graphene: Direct Azidation from Monolayers, Click Chemistry, and Bulk Production from Graphite. Nano letters 20 (1) (2019)
Leiting Pan, Ping Zhang, Fen Hu, Rui Yan, Manni He, Wan Li, Jingjun Xu, Ke Xu
Hypotonic Stress Induces Fast, Reversible Degradation of the Vimentin Cytoskeleton via Intracellular Calcium Release. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 6 (18) (2019)
Dmytro I Danylchuk, Seonah Moon, Ke Xu, Andrey S Klymchenko
Switchable Solvatochromic Probes for Live-Cell Super-resolution Imaging of Plasma Membrane Organization. Angewandte Chemie (International ed. in English) 58 (42) (2019)
Jeongmin Kim, Michal Wojcik, Yuan Wang, Seonah Moon, Emilia A Zin, Nadia Marnani, Zachary L Newman, John G Flannery, Ke Xu, Xiang Zhang
Oblique-plane single-molecule localization microscopy for tissues and small intact animals. Nature methods 16 (9) (2019)
Taehwan Kim, Seonah Moon, Ke Xu
Information-rich localization microscopy through machine learning. Nature communications 10 (1) (2019)
Yidi Sun, Johannes Schöneberg, Xuyan Chen, Tommy Jiang, Charlotte Kaplan, Ke Xu, Thomas D Pollard, David G Drubin
Direct comparison of clathrin-mediated endocytosis in budding and fission yeast reveals conserved and evolvable features. eLife 8 (2019)
Dharati Joshi, Meghan Hauser, Gregory Veber, Alexandra Berl, Ke Xu, Felix R Fischer
Super-Resolution Imaging of Clickable Graphene Nanoribbons Decorated with Fluorescent Dyes. Journal of the American Chemical Society 140 (30) (2018)
Limin Xiang, Michal Wojcik, Samuel J Kenny, Rui Yan, Seonah Moon, Wan Li, Ke Xu
Optical characterization of surface adlayers and their compositional demixing at the nanoscale. Nature communications 9 (1) (2018)
Lin Yuan, Samuel J Kenny, Juliet Hemmati, Ke Xu, Randy Schekman
TANGO1 and SEC12 are copackaged with procollagen I to facilitate the generation of large COPII carriers. Proceedings of the National Academy of Sciences of the United States of America 115 (52) (2018)
Rui Yan, Seonah Moon, Samuel J Kenny, Ke Xu
Spectrally Resolved and Functional Super-resolution Microscopy via Ultrahigh-Throughput Single-Molecule Spectroscopy. Accounts of chemical research 51 (3) (2018)
Vahid Serpooshan, Sara Sheibani, Pooja Pushparaj, Michal Wojcik, Albert Y Jang, Michelle R Santoso, Joyce H Jang, Haina Huang, Reihaneh Safavi-Sohi, Niloofar Haghjoo, Hossein Nejadnik, Haniyeh Aghaverdi, Hojatollah Vali, Joseph Matthew Kinsella, John Presley, Ke Xu, Phillip Chung-Ming Yang, Morteza Mahmoudi
Effect of Cell Sex on Uptake of Nanoparticles: The Overlooked Factor at the Nanobio Interface. ACS nano 12 (3) (2018)
Tiam Heydari, Maziar Heidari, Omid Mashinchian, Michal Wojcik, Ke Xu, Matthew John Dalby, Morteza Mahmoudi, Mohammad Reza Ejtehadi
Development of a Virtual Cell Model to Predict Cell Response to Substrate Topography. ACS nano 11 (9) (2017)
Simone Köhler, Michal Wojcik, Ke Xu, Abby F Dernburg
Superresolution microscopy reveals the three-dimensional organization of meiotic chromosome axes in intact Caenorhabditis elegans tissue. Proceedings of the National Academy of Sciences of the United States of America 114 (24) (2017)
Doory Kim, Zhengyang Zhang, Ke Xu
Spectrally Resolved Super-Resolution Microscopy Unveils Multipath Reaction Pathways of Single Spiropyran Molecules. Journal of the American Chemical Society 139 (28) (2017)
Amita Gorur, Lin Yuan, Samuel J Kenny, Satoshi Baba, Ke Xu, Randy Schekman
COPII-coated membranes function as transport carriers of intracellular procollagen I. The Journal of cell biology 216 (6) (2017)
Meghan Hauser, Michal Wojcik, Doory Kim, Morteza Mahmoudi, Wan Li, Ke Xu
Correlative Super-Resolution Microscopy: New Dimensions and New Opportunities. Chemical reviews 117 (11) (2017)
Seonah Moon, Rui Yan, Samuel J Kenny, Yennie Shyu, Limin Xiang, Wan Li, Ke Xu
Spectrally Resolved, Functional Super-Resolution Microscopy Reveals Nanoscale Compositional Heterogeneity in Live-Cell Membranes. Journal of the American Chemical Society 139 (32) (2017)
Christina L Hueschen, Samuel J Kenny, Ke Xu, Sophie Dumont
NuMA recruits dynein activity to microtubule minus-ends at mitosis. eLife 6 (2017)
Liang Ge, Min Zhang, Samuel J Kenny, Dawei Liu, Miharu Maeda, Kota Saito, Anandita Mathur, Ke Xu, Randy Schekman
Remodeling of ER-exit sites initiates a membrane supply pathway for autophagosome biogenesis. EMBO reports 18 (9) (2017)
Michal Wojcik, Yunqi Li, Wan Li, Ke Xu
Spatially Resolved in Situ Reaction Dynamics of Graphene via Optical Microscopy. Journal of the American Chemical Society 139 (16) (2017)
Min Zhang, Samuel J Kenny, Liang Ge, Ke Xu, Randy Schekman
Translocation of interleukin-1β into a vesicle intermediate in autophagy-mediated secretion. eLife 4 (2015)
Zhengyang Zhang, Samuel J Kenny, Margaret Hauser, Wan Li, Ke Xu
Ultrahigh-throughput single-molecule spectroscopy and spectrally resolved super-resolution microscopy. Nature methods 12 (10) (2015)
Michal Wojcik, Margaret Hauser, Wan Li, Seonah Moon, Ke Xu
Graphene-enabled electron microscopy and correlated super-resolution microscopy of wet cells. Nature communications 6 (2015)

Ke Xu.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Ke Xu