Laura Barisoni

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 14

Top Topics

Convolutional Neural Network

Chronic Kidney Disease

Bioinformatics Analysis

Top Venues

Journal of the American Society of Nephrology : JASN

NPJ digital medicine

Nature reviews. Nephrology

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Yongqun Oliver He, Laura Barisoni, Avi Z Rosenberg, Peter Nick Robinson, Alexander D Diehl, Yichao Chen, Jimmy P Phuong, Jens Hansen, Bruce W Herr, Katy Börner, Jennifer A Schaub, Nikki Bonevich, Ghida Arnous, Saketh Boddapati, Jie Zheng, Fadhl M Al-Akwaa, Pinaki Sarder, William D Duncan, Chen Liang, M Todd Valerius, Sanjay Jain, Ravi Iyengar, Jonathan Himmelfarb, Matthias Kretzler, null null
Ontology-based modeling, integration, and analysis of heterogeneous clinical, pathological, and molecular kidney data for precision medicine. bioRxiv : the preprint server for biology (2024)
Cédric Walker, Tasneem Talawalla, Robert Toth, Akhil Ambekar, Kien Rea, Oswin Chamian, Fan Fan, Sabina Berezowska, Sven Rottenberg, Anant Madabhushi, Marie Maillard, Laura Barisoni, Hugo Mark Horlings, Andrew Janowczyk
PatchSorter: a high throughput deep learning digital pathology tool for object labeling. NPJ digital medicine 7 (1) (2024)
Yongqun Oliver He, Laura Barisoni, Avi Z Rosenberg, Peter Nick Robinson, Alexander D Diehl, Yichao Chen, Jimmy P Phuong, Jens Hansen, Bruce W Herr, Katy Börner, Jennifer A Schaub, Nikki Bonevich, Ghida Arnous, Saketh Boddapati, Jie Zheng, Fadhl M Al-Akwaa, Pinaki Sarder, William D Duncan, Chen Liang, M Todd Valerius, Sanjay Jain, Ravi Iyengar, Jonathan Himmelfarb, Matthias Kretzler, null null
Ontology-based modeling, integration, and analysis of heterogeneous clinical, pathological, and molecular kidney data for precision medicine. bioRxiv : the preprint server for biology (2024)
Cédric Walker, Tasneem Talawalla, Robert Toth, Akhil Ambekar, Kien Rea, Oswin Chamian, Fan Fan, Sabina Berezowska, Sven Rottenberg, Anant Madabhushi, Marie Maillard, Laura Barisoni, Hugo Mark Horlings, Andrew Janowczyk
PatchSorter: a high throughput deep learning digital pathology tool for object labeling. NPJ digital medicine 7 (1) (2024)
Cédric Walker, Tasneem Talawalla, Robert Toth, Akhil Ambekar, Kien Rea, Oswin Chamian, Fan Fan, Sabina Berezowska, Sven Rottenberg, Anant Madabhushi, Marie Maillard, Laura Barisoni, Hugo Mark Horlings, Andrew Janowczyk
PatchSorter: a high throughput deep learning digital pathology tool for object labeling. NPJ digital medicine 7 (1) (2024)
Muhammad Sohaib Asghar, Aleksandar Denic, Aidan F Mullan, Amr Moustafa, Laura Barisoni, Mariam P Alexander, Mark D Stegall, Joshua Augustine, Bradley C Leibovich, R Houston Thompson, Andrew D Rule
Age-Based versus Young-Adult Thresholds for Nephrosclerosis on Kidney Biopsy and Prognostic Implications for Chronic Kidney Disease. Journal of the American Society of Nephrology : JASN (2023)
Aleksandar Denic, Mrunanjali Gaddam, Amr Moustafa, Aidan F Mullan, Anthony C Luehrs, Vidit Sharma, R Houston Thompson, Maxwell L Smith, Mariam P Alexander, Lilach Orly Lerman, Laura Barisoni, Andrew D Rule
Tubular and Glomerular Size by Cortex Depth as Predictors of Progressive Chronic Kidney Disease after Radical Nephrectomy for Tumor. Journal of the American Society of Nephrology : JASN (2023)
Jarcy Zee, Qian Liu, Abigail R Smith, Jeffrey B Hodgin, Avi Z Rosenberg, Brenda W Gillespie, Lawrence B Holzman, Laura Barisoni, Laura H Mariani, null null, null null
Kidney Biopsy Features Most Predictive of Clinical Outcomes in the Spectrum of Minimal Change Disease and Focal Segmental Glomerulosclerosis. Journal of the American Society of Nephrology : JASN 33 (7) (2022)
Jens Hansen, Rachel Sealfon, Rajasree Menon, Michael T Eadon, Blue B Lake, Becky Steck, Kavya Anjani, Samir Parikh, Tara K Sigdel, Guanshi Zhang, Dušan Veličković, Daria Barwinska, Theodore Alexandrov, Dejan Dobi, Priyanka Rashmi, Edgar A Otto, Miguel Rivera, Michael P Rose, Christopher R Anderton, John P Shapiro, Annapurna Pamreddy, Seth Winfree, Yuguang Xiong, Yongqun Oliver He, Ian H de Boer, Jeffrey B Hodgin, Laura Barisoni, Abhijit S Naik, Kumar Sharma, Minnie M Sarwal, Kun Zhang, Jonathan Himmelfarb, Brad H Rovin, Tarek M El-Achkar, Zoltan G Laszik, John Cijiang He, Pierre C Dagher, M Todd Valerius, Sanjay Jain, Lisa M Satlin, Olga G Troyanskaya, Matthias Kretzler, Ravi Iyengar, Evren U Azeloglu, null null
A reference tissue atlas for the human kidney. Science advances 8 (23) (2022)
Brendon Lutnick, David Manthey, Jan U Becker, Brandon Ginley, Katharina Moos, Jonathan E Zuckerman, Luis Rodrigues, Alexander J Gallan, Laura Barisoni, Charles E Alpers, Xiaoxin X Wang, Komuraiah Myakala, Bryce A Jones, Moshe Levi, Jeffrey B Kopp, Teruhiko Yoshida, Jarcy Zee, Seung Seok Han, Sanjay Jain, Avi Z Rosenberg, Kuang Yu Jen, Pinaki Sarder, null null
A user-friendly tool for cloud-based whole slide image segmentation with examples from renal histopathology. Communications medicine 2 (2022)
Matthew B Wright, Javier Santos, Christian Kemmer, Cyrille Maugeais, Jean-Philippe Carralot, Stephan Roever, Judith Molina, G Michelle Ducasa, Alla Mitrofanova, Alexis Sloan, Anis Ahmad, Christopher Pedigo, Mengyuan Ge, Jeffrey Pressly, Laura Barisoni, Armando Mendez, Jacopo Sgrignani, Andrea Cavalli, Sandra Merscher, Marco Prunotto, Alessia Fornoni
Compounds targeting OSBPL7 increase ABCA1-dependent cholesterol efflux preserving kidney function in two models of kidney disease. Nature communications 12 (1) (2021)
Xiang Li, Richard C Davis, Yuemei Xu, Zehan Wang, Nao Souma, Gina Sotolongo, Jonathan L Bell, Matthew Ellis, David Howell, Xiling Shen, Kyle J Lafata, Laura Barisoni
Deep learning segmentation of glomeruli on kidney donor frozen sections. Journal of medical imaging (Bellingham, Wash.) 8 (6) (2021)
Edison Ong, Lucy Lu Wang, Jennifer A Schaub, John F O'Toole, Becky Steck, Avi Z Rosenberg, Frederick Dowd, Jens Hansen, Laura Barisoni, Sanjay Jain, Ian H de Boer, M Todd Valerius, Sushrut S Waikar, Christopher Park, Dana C Crawford, Theodore Alexandrov, Christopher R Anderton, Christian J Stoeckert, Chunhua Weng, Alexander D Diehl, Christopher J Mungall, Melissa Haendel, Peter Nick Robinson, Jonathan Himmelfarb, Ravi Iyengar, Matthias Kretzler, Sean Mooney, Yongqun Oliver He, null null
Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project. Nature reviews. Nephrology 16 (11) (2020)
Laura Barisoni, Kyle J Lafata, Stephen M Hewitt, Anant Madabhushi, Ulysses G J Balis
Digital pathology and computational image analysis in nephropathology. Nature reviews. Nephrology 16 (11) (2020)