Kun Zhang (K Zhang)

ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 40

Top Venues

Nature communications

Nature

Nature biotechnology

Nature protocols

This page only lists publications with an associated author ORCID identifier.

Publications

Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Kian Kalhor, Chien-Ju Chen, Ho Suk Lee, Matthew Cai, Mahsa Nafisi, Richard Que, Carter R Palmer, Yixu Yuan, Yida Zhang, Xuwen Li, Jinghui Song, Amanda Knoten, Blue B Lake, Joseph P Gaut, C Dirk Keene, Ed S Lein, Peter V Kharchenko, Jerold Chun, Sanjay Jain, Jian-Bing Fan, Kun Zhang
Mapping human tissues with highly multiplexed RNA in situ hybridization. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
V K Ninh, D M Calcagno, J D Yu, B Zhang, N Taghdiri, R Sehgal, Joshua M Mesfin, C J Chen, Kian Kalhor, A Toomu, J M Duran, E Adler, J Hu, Kun Zhang, Karen L Christman, Z Fu, B Bintu, Kevin R King
Spatially clustered type I interferon responses at injury borderzones. Nature (2024)
Kian Kalhor, Chien-Ju Chen, Ho Suk Lee, Matthew Cai, Mahsa Nafisi, Richard Que, Carter R Palmer, Yixu Yuan, Yida Zhang, Xuwen Li, Jinghui Song, Amanda Knoten, Blue B Lake, Joseph P Gaut, C Dirk Keene, Ed S Lein, Peter V Kharchenko, Jerold Chun, Sanjay Jain, Jian-Bing Fan, Kun Zhang
Mapping human tissues with highly multiplexed RNA in situ hybridization. Nature communications 15 (1) (2024)
Kian Kalhor, Chien-Ju Chen, Ho Suk Lee, Matthew Cai, Mahsa Nafisi, Richard Que, Carter R Palmer, Yixu Yuan, Yida Zhang, Xuwen Li, Jinghui Song, Amanda Knoten, Blue B Lake, Joseph P Gaut, C Dirk Keene, Ed S Lein, Peter V Kharchenko, Jerold Chun, Sanjay Jain, Jian-Bing Fan, Kun Zhang
Mapping human tissues with highly multiplexed RNA in situ hybridization. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
V K Ninh, D M Calcagno, J D Yu, B Zhang, N Taghdiri, R Sehgal, Joshua M Mesfin, C J Chen, Kian Kalhor, A Toomu, J M Duran, E Adler, J Hu, Kun Zhang, Karen L Christman, Z Fu, B Bintu, Kevin R King
Spatially clustered type I interferon responses at injury borderzones. Nature (2024)
Shankar Subramaniam, Metin Akay, Mark A Anastasio, Vasudev Bailey, David A Boas, Ashutosh Chilkoti, Jennifer R Cochran, Vicki L Colvin, Tejal A Desai, James S Duncan, Frederick H Epstein, Stephanie I Fraley, Cecilia Maria Giachelli, Kathryn Jane Grande-Allen, Jordan J Green, Xiang-Dong Edward Guo, Isaac B Hilton, Jay D Humphrey, Chris R Johnson, George Em Karniadakis, Michael R King, Robert F Kirsch, Sanjay Kumar, Cato T Laurencin, Song Li, Richard L Lieber, Nigel H Lovell, Prashant Mali, Stephanie A Pasquesi, David F Meaney, Brenda M Ogle, Bernhard O Palsson, Nicholas A Peppas, Eric J Perreault, Richard D Rabbitt, Lori A Setton, Lonnie D Shea, Sanjeev G Shroff, Kirk Shung, Andreas Savas Tolias, Marjolein C H van der Meulen, Shyni Varghese, Gordana Vunjak-Novakovic, John A White, Raimond L Winslow, Jianyi Jay Zhang, Kun Zhang, Charles Zukoski
Grand Challenges at the Interface of Engineering and Medicine. IEEE open journal of engineering in medicine and biology 5 (2024)
Kian Kalhor, Chien-Ju Chen, Ho Suk Lee, Matthew Cai, Mahsa Nafisi, Richard Que, Carter R Palmer, Yixu Yuan, Yida Zhang, Xuwen Li, Jinghui Song, Amanda Knoten, Blue B Lake, Joseph P Gaut, C Dirk Keene, Ed S Lein, Peter V Kharchenko, Jerold Chun, Sanjay Jain, Jian-Bing Fan, Kun Zhang
Mapping human tissues with highly multiplexed RNA in situ hybridization. Nature communications 15 (1) (2024)
Kian Kalhor, Chien-Ju Chen, Ho Suk Lee, Matthew Cai, Mahsa Nafisi, Richard Que, Carter R Palmer, Yixu Yuan, Yida Zhang, Xuwen Li, Jinghui Song, Amanda Knoten, Blue B Lake, Joseph P Gaut, C Dirk Keene, Ed S Lein, Peter V Kharchenko, Jerold Chun, Sanjay Jain, Jian-Bing Fan, Kun Zhang
Mapping human tissues with highly multiplexed RNA in situ hybridization. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Kian Kalhor, Chien-Ju Chen, Ho Suk Lee, Matthew Cai, Mahsa Nafisi, Richard Que, Carter R Palmer, Yixu Yuan, Yida Zhang, Xuwen Li, Jinghui Song, Amanda Knoten, Blue B Lake, Joseph P Gaut, C Dirk Keene, Ed S Lein, Peter V Kharchenko, Jerold Chun, Sanjay Jain, Jian-Bing Fan, Kun Zhang
Mapping human tissues with highly multiplexed RNA in situ hybridization. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Debora L Gisch, Michelle Pherson, Blue B Lake, Jeannine Basta, Mark S Keller, Ricardo Melo Ferreira, Shreeram Akilesh, Reetika Ghag, Charles Lu, Ying-Hua Cheng, Kimberly S Collins, Samir V Parikh, Brad H Rovin, Lynn Robbins, Lisa Stout, Kimberly Y Conklin, Dinh Diep, Bo Zhang, Amanda Knoten, Daria Barwinska, Mahla Asghari, Angela R Sabo, Michael J Ferkowicz, Timothy A Sutton, Katherine J Kelly, Ian H De Boer, Sylvia E Rosas, Krzysztof Kiryluk, Jeffrey B Hodgin, Fadhl Alakwaa, Seth Winfree, Nichole Jefferson, Aydın Türkmen, Joseph P Gaut, Nils Gehlenborg, Carrie L Phillips, Tarek M El-Achkar, Pierre C Dagher, Takashi Hato, Kun Zhang, Jonathan Himmelfarb, Matthias Kretzler, Shamim Mollah, null null, Sanjay Jain, Michael Rauchman, Michael T Eadon
The chromatin landscape of healthy and injured cell types in the human kidney. Nature communications 15 (1) (2024)
Victor Hugo Canela, William S Bowen, Ricardo Melo Ferreira, Farooq Syed, James E Lingeman, Angela R Sabo, Daria Barwinska, Seth Winfree, Blue B Lake, Ying-Hua Cheng, Joseph P Gaut, Michael Ferkowicz, Kaice A LaFavers, Kun Zhang, Fredric L Coe, Elaine Worcester, null null, Sanjay Jain, Michael T Eadon, James C Williams, Tarek M El-Achkar
A spatially anchored transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease. Nature communications 14 (1) (2023)
Blue B Lake, Rajasree Menon, Seth Winfree, Qiwen Hu, Ricardo Melo Ferreira, Kian Kalhor, Daria Barwinska, Edgar A Otto, Michael Ferkowicz, Dinh Diep, Nongluk Plongthongkum, Amanda Knoten, Sarah Urata, Laura H Mariani, Abhijit S Naik, Sean Eddy, Bo Zhang, Yan Wu, Diane Salamon, James C Williams, Xin Wang, Karol S Balderrama, Paul J Hoover, Evan Murray, Jamie L Marshall, Teia Noel, Anitha Vijayan, Austin Hartman, Fei Chen, Sushrut S Waikar, Sylvia E Rosas, Francis Perry Wilson, Susan T Crowley, Krzysztof Kiryluk, John R Sedor, Robert D Toto, Chirag R Parikh, Eric H Kim, Rahul Satija, Anna Greka, Evan Z Macosko, Peter V Kharchenko, Joseph P Gaut, Jeffrey B Hodgin, null null, Michael T Eadon, Pierre C Dagher, Tarek M El-Achkar, Kun Zhang, Matthias Kretzler, Sanjay Jain
An atlas of healthy and injured cell states and niches in the human kidney. Nature 619 (7970) (2023)
Kian Kalhor, Chien-Ju Chen, Ho Suk Lee, Matthew Cai, Mahsa Nafisi, Richard Que, Carter Palmer, Yixu Yuan, Yida Zhang, Jinghui Song, Amanda Knoten, Blue B Lake, Joseph P Gaut, Dirk Keene, Ed Lein, Peter V Kharchenko, Jerold Chun, Sanjay Jain, Jian-Bing Fan, Kun Zhang
Mapping Human Tissues with Highly Multiplexed RNA in situ Hybridization. bioRxiv : the preprint server for biology (2023)
Carolina Makowski, Dennis van der Meer, Weixiu Dong, Hao Wang, Yan Wu, Jingjing Zou, Cin Liu, Sara Brin Rosenthal, Donald J Hagler, Chun-Chieh Fan, William S Kremen, Ole Andreas Andreassen, Terry L Jernigan, Anders M Dale, Kun Zhang, Peter M Visscher, Jian Yang, Chi-Hua Chen
Discovery of genomic loci of the human cerebral cortex using genetically informed brain atlases. Science (New York, N.Y.) 375 (6580) (2022)
Jens Hansen, Rachel Sealfon, Rajasree Menon, Michael T Eadon, Blue B Lake, Becky Steck, Kavya Anjani, Samir Parikh, Tara K Sigdel, Guanshi Zhang, Dušan Veličković, Daria Barwinska, Theodore Alexandrov, Dejan Dobi, Priyanka Rashmi, Edgar A Otto, Miguel Rivera, Michael P Rose, Christopher R Anderton, John P Shapiro, Annapurna Pamreddy, Seth Winfree, Yuguang Xiong, Yongqun Oliver He, Ian H de Boer, Jeffrey B Hodgin, Laura Barisoni, Abhijit S Naik, Kumar Sharma, Minnie M Sarwal, Kun Zhang, Jonathan Himmelfarb, Brad H Rovin, Tarek M El-Achkar, Zoltan G Laszik, John Cijiang He, Pierre C Dagher, M Todd Valerius, Sanjay Jain, Lisa M Satlin, Olga G Troyanskaya, Matthias Kretzler, Ravi Iyengar, Evren U Azeloglu, null null
A reference tissue atlas for the human kidney. Science advances 8 (23) (2022)
Trygve E Bakken, Nikolas L Jorstad, Qiwen Hu, Blue B Lake, Wei Tian, Brian E Kalmbach, Megan Crow, Rebecca D Hodge, Fenna M Krienen, Staci A Sorensen, Jeroen Eggermont, Zizhen Yao, Brian D Aevermann, Andrew I Aldridge, Anna Bartlett, Darren Bertagnolli, Tamara Casper, Rosa G Castanon, Kirsten Crichton, Tanya L Daigle, Rachel Dalley, Nick Dee, Nikolai C Dembrow, Dinh Diep, Song-Lin Ding, Weixiu Dong, Rongxin Fang, Stephan Fischer, Melissa Goldman, Jeff Goldy, Lucas T Gray, Brian R Herb, Xiaomeng Hou, Jayaram Kancherla, Matthew Kroll, Kanan Lathia, Baldur van Lew, Yang Eric Li, Christine S Liu, Hanqing Liu, Jacinta D Lucero, Anup A Mahurkar, Delissa McMillen, Jeremy A Miller, Marmar Moussa, Joseph R Nery, Philip R Nicovich, Sheng-Yong Niu, Joshua Orvis, Julia K Osteen, Scott Owen, Carter R Palmer, Trangthanh H Pham, Nongluk Plongthongkum, Olivier Poirion, Nora M Reed, Christine Rimorin, Angeline Rivkin, William J Romanow, Adriana E Sedeño-Cortés, Kimberly Siletti, Saroja Somasundaram, Josef Sulc, Michael Tieu, Amy Torkelson, Herman Tung, Xinxin Wang, Fangming Xie, Anna Marie Yanny, Renee Zhang, Seth A Ament, M Margarita Behrens, Hector Corrada Bravo, Jerold Chun, Alexander Dobin, Jesse Gillis, Ronna Hertzano, Patrick R Hof, Thomas Höllt, Gregory D Horwitz, C Dirk Keene, Peter V Kharchenko, Andrew L Ko, Boudewijn P F Lelieveldt, Chongyuan Luo, Eran A Mukamel, António Pinto-Duarte, Sebastian Preissl, Aviv Regev, Bing Ren, Richard H Scheuermann, Kimberly A Smith, William J Spain, Owen R White, Christof Koch, Michael J Hawrylycz, Bosiljka Tasic, Evan Z Macosko, Steven A McCarroll, Jonathan T Ting, Hongkui Zeng, Kun Zhang, Guoping Feng, Joseph R Ecker, Sten Linnarsson, Ed S Lein
Comparative cellular analysis of motor cortex in human, marmoset and mouse. Nature 598 (7879) (2021)
Nongluk Plongthongkum, Dinh Diep, Song Chen, Blue B Lake, Kun Zhang
Scalable dual-omics profiling with single-nucleus chromatin accessibility and mRNA expression sequencing 2 (SNARE-seq2). Nature protocols 16 (11) (2021)
Brian M Reilly, Tiffany N Tanaka, Dinh Diep, Huwate Yeerna, Pablo Tamayo, Kun Zhang, Rafael Bejar
DNA methylation identifies genetically and prognostically distinct subtypes of myelodysplastic syndromes. Blood advances 3 (19) (2020)
Yan Wu, Kun Zhang
Tools for the analysis of high-dimensional single-cell RNA sequencing data. Nature reviews. Nephrology 16 (7) (2020)
Xingdong Chen, Jeffrey Gole, Athurva Gore, Qiye He, Ming Lu, Jun Min, Ziyu Yuan, Xiaorong Yang, Yanfeng Jiang, Tiejun Zhang, Chen Suo, Xiaojie Li, Lei Cheng, Zhenhua Zhang, Hongyu Niu, Zhe Li, Zhen Xie, Han Shi, Xiang Zhang, Min Fan, Xiaofeng Wang, Yajun Yang, Justin Dang, Catie McConnell, Juan Zhang, Jiucun Wang, Shunzhang Yu, Weimin Ye, Yuan Gao, Kun Zhang, Rui Liu, Li Jin
Non-invasive early detection of cancer four years before conventional diagnosis using a blood test. Nature communications 11 (1) (2020)
Brian M Reilly, Timothy Luger, Soo Park, Chan-Wang Jerry Lio, Edahí González-Avalos, Emily C Wheeler, Minjung Lee, Laura Williamson, Tiffany Tanaka, Dinh Diep, Kun Zhang, Yun Huang, Anjana Rao, Rafael Bejar
5-Azacytidine Transiently Restores Dysregulated Erythroid Differentiation Gene Expression in TET2-Deficient Erythroleukemia Cells. Molecular cancer research : MCR 19 (3) (2020)
Blue B Lake, Song Chen, Masato Hoshi, Nongluk Plongthongkum, Diane Salamon, Amanda Knoten, Anitha Vijayan, Ramakrishna Venkatesh, Eric H Kim, Derek Gao, Joseph Gaut, Kun Zhang, Sanjay Jain
A single-nucleus RNA-sequencing pipeline to decipher the molecular anatomy and pathophysiology of human kidneys. Nature communications 10 (1) (2019)
Keiichiro Suzuki, Mako Yamamoto, Reyna Hernandez-Benitez, Zhe Li, Christopher Wei, Rupa Devi Soligalla, Emi Aizawa, Fumiyuki Hatanaka, Masakazu Kurita, Pradeep Reddy, Alejandro Ocampo, Tomoaki Hishida, Masahiro Sakurai, Amy N Nemeth, Estrella Nuñez Delicado, Josep M Campistol, Pierre Magistretti, Pedro Guillen, Concepcion Rodriguez Esteban, Jianhui Gong, Yilin Yuan, Ying Gu, Guang-Hui Liu, Carlos López-Otín, Jun Wu, Kun Zhang, Juan Carlos Izpisua Belmonte
Precise in vivo genome editing via single homology arm donor mediated intron-targeting gene integration for genetic disease correction. Cell research 29 (10) (2019)
Dinh Diep, Kun Zhang
Reply to 'DNA methylation haplotypes as cancer markers'. Nature genetics 50 (8) (2019)
Song Chen, Blue B Lake, Kun Zhang
High-throughput sequencing of the transcriptome and chromatin accessibility in the same cell. Nature biotechnology 37 (12) (2019)
Kun Zhang
Stratifying tissue heterogeneity with scalable single-cell assays. Nature methods 14 (3) (2018)
Sebastian Preissl, Rongxin Fang, Hui Huang, Yuan Zhao, Ramya Raviram, David U Gorkin, Yanxiao Zhang, Brandon C Sos, Veena Afzal, Diane E Dickel, Samantha Kuan, Axel Visel, Len A Pennacchio, Kun Zhang, Bing Ren
Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation. Nature neuroscience 21 (3) (2018)
Blue B Lake, Simone Codeluppi, Yun C Yung, Derek Gao, Jerold Chun, Peter V Kharchenko, Sten Linnarsson, Kun Zhang
A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA. Scientific reports 7 (1) (2017)
Blue B Lake, Song Chen, Brandon C Sos, Jean Fan, Gwendolyn E Kaeser, Yun C Yung, Thu E Duong, Derek Gao, Jerold Chun, Peter V Kharchenko, Kun Zhang
Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain. Nature biotechnology 36 (1) (2017)
Jean Fan, Neeraj Salathia, Rui Liu, Gwendolyn E Kaeser, Yun C Yung, Joseph L Herman, Fiona Kaper, Jian-Bing Fan, Kun Zhang, Jerold Chun, Peter V Kharchenko
Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis. Nature methods 13 (3) (2016)
Je Hyuk Lee, Evan R Daugharthy, Jonathan Scheiman, Reza Kalhor, Thomas C Ferrante, Richard Terry, Brian M Turczyk, Joyce L Yang, Ho Suk Lee, John Aach, Kun Zhang, George M Church
Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues. Nature protocols 10 (3) (2015)

Kun Zhang.css-eqlu8i{font-size:small;padding-left:4px;} (K Zhang)

Publication Activity (10 Years)

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Kun Zhang (K Zhang)