Luis M Rodriguez-R (L M Rodriguez-R)

ResearcherID Loop profile ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 26

Top Venues

Nature communications

mSystems

Applied and environmental microbiology

The ISME journal

Georgia Institute of Technology (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

Georgia Institute of Technology Aug 02 2011 - Dec 17 2016

United States

PHD :: School of Biological Sciences

Université de Montpellier Aug 02 2010 - Aug 02 2011

France

MSC :: Département Informatique

Universidad de los Andes Jan 01 2009 - Mar 26 2011

Colombia

MSC :: Departamento de Ciencias Biológicas

Universidad Nacional de Colombia Jan 01 2004 - Jul 30 2009

Colombia

BSC :: Departamento de Biología

Publications

Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R, Ana Sofia Ramírez, Stephanus N Venter, Jairo Rocha-Cárdenas, Mercè Llabrés, Rudolf I Amann, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Towards estimating the number of strains that make up a natural bacterial population. Nature communications 15 (1) (2024)
William B Whitman, Maria Chuvochina, Brian P Hedlund, Konstantinos T Konstantinidis, Marike Palmer, Luis M Rodriguez-R, Iain C Sutcliffe, Feng-Ping Wang
Why and how to use the SeqCode. mLife 3 (1) (2024)
Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R, Ana Sofia Ramírez, Stephanus N Venter, Jairo Rocha-Cárdenas, Mercè Llabrés, Rudolf I Amann, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Towards estimating the number of strains that make up a natural bacterial population. Nature communications 15 (1) (2024)
William B Whitman, Maria Chuvochina, Brian P Hedlund, Konstantinos T Konstantinidis, Marike Palmer, Luis M Rodriguez-R, Iain C Sutcliffe, Feng-Ping Wang
Why and how to use the SeqCode. mLife 3 (1) (2024)
Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R, Ana Sofia Ramírez, Stephanus N Venter, Jairo Rocha-Cárdenas, Mercè Llabrés, Rudolf I Amann, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Towards estimating the number of strains that make up a natural bacterial population. Nature communications 15 (1) (2024)
Jianshu Zhao, Jean Pierre Both, Luis M Rodriguez-R, Konstantinos T Konstantinidis
GSearch: ultra-fast and scalable genome search by combining K-mer hashing with hierarchical navigable small world graphs. Nucleic acids research (2024)
Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R, Ana Sofia Ramírez, Stephanus N Venter, Jairo Rocha-Cárdenas, Mercè Llabrés, Rudolf I Amann, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Towards estimating the number of strains that make up a natural bacterial population. Nature communications 15 (1) (2024)
Luis M Rodriguez-R, Roth E Conrad, Tomeu Viver, Dorian J Feistel, Blake G Lindner, Stephanus N Venter, Luis H Orellana, Rudolf Amann, Ramon Rossello-Mora, Konstantinos T Konstantinidis
An ANI gap within bacterial species that advances the definitions of intra-species units. mBio (2023)
Brian P Hedlund, Maria Chuvochina, Philip Hugenholtz, Konstantinos T Konstantinidis, Alison E Murray, Marike Palmer, Donovan H Parks, Alexander J Probst, Anna-Louise Reysenbach, Luis M Rodriguez-R, Ramon Rosselló-Móra, Iain C Sutcliffe, Stephanus N Venter, William B Whitman
SeqCode: a nomenclatural code for prokaryotes described from sequence data. Nature microbiology 7 (10) (2022)
Minjae Kim, Luis M Rodriguez-R, Janet K Hatt, Osman Kayali, Rassul Nalá, Anne L Dunlop, Patricia A Brennan, Elizabeth Corwin, Alicia K Smith, Joe Brown, Konstantinos T Konstantinidis
Higher pathogen load in children from Mozambique vs. USA revealed by comparative fecal microbiome profiling. ISME communications 2 (1) (2022)
Si-Yu Zhang, Brittany Suttner, Luis M Rodriguez-R, Luis H Orellana, Roth E Conrad, Fang Liu, Jessica L Rowell, Hattie E Webb, Amanda J Williams-Newkirk, Andrew Huang, Konstantinos T Konstantinidis
ROCker Models for Reliable Detection and Typing of Short-Read Sequences Carrying β-Lactamase Genes. mSystems 7 (3) (2022)
Carlos Andrés Díaz Rodríguez, Laura Díaz-García, Boyke Bunk, Cathrin Spröer, Katherine Herrera, Natalia Andrea Tarazona, Luis M Rodriguez-R, Jörg Overmann, Diego Javier Jiménez
Novel bacterial taxa in a minimal lignocellulolytic consortium and their potential for lignin and plastics transformation. ISME communications 2 (1) (2022)
Alexandra Meziti, Luis M Rodriguez-R, Janet K Hatt, Angela Peña-Gonzalez, Karen Levy, Konstantinos T Konstantinidis
The Reliability of Metagenome-Assembled Genomes (MAGs) in Representing Natural Populations: Insights from Comparing MAGs against Isolate Genomes Derived from the Same Fecal Sample. Applied and environmental microbiology 87 (6) (2021)
Patrick Heritier-Robbins, Smruthi Karthikeyan, Janet K Hatt, Minjae Kim, Markus Huettel, Joel E Kostka, Konstantinos T Konstantinidis, Luis M Rodriguez-R
Beach sand oil spills select for generalist microbial populations. The ISME journal 15 (11) (2021)
Luis M Rodriguez-R, Chirag Jain, Roth E Conrad, Srinivas Aluru, Konstantinos T Konstantinidis
Reply to: "Re-evaluating the evidence for a universal genetic boundary among microbial species". Nature communications 12 (1) (2021)
Brittany Suttner, Minjae Kim, Eric R Johnston, Luis H Orellana, Carlos A Ruiz-Perez, Luis M Rodriguez-R, Janet K Hatt, Joe Brown, Jorge W Santo Domingo, Konstantinos T Konstantinidis
Transcriptomic and rRNA:rDNA Signatures of Environmental versus Enteric Enterococcus faecalis Isolates under Oligotrophic Freshwater Conditions. Microbiology spectrum 9 (2) (2021)
Brittany Suttner, Eric R Johnston, Luis H Orellana, Luis M Rodriguez-R, Janet K Hatt, Diana Carychao, Michelle Q Carter, Michael B Cooley, Konstantinos T Konstantinidis
Metagenomics as a Public Health Risk Assessment Tool in a Study of Natural Creek Sediments Influenced by Agricultural and Livestock Runoff: Potential and Limitations. Applied and environmental microbiology 86 (6) (2020)
Smruthi Karthikeyan, Luis M Rodriguez-R, Patrick Heritier-Robbins, Janet K Hatt, Markus Huettel, Joel E Kostka, Konstantinos T Konstantinidis
Genome repository of oil systems: An interactive and searchable database that expands the catalogued diversity of crude oil-associated microbes. Environmental microbiology 22 (6) (2020)
Luis M Rodriguez-R, Despina Tsementzi, Chengwei Luo, Konstantinos T Konstantinidis
Iterative subtractive binning of freshwater chronoseries metagenomes identifies over 400 novel species and their ecologic preferences. Environmental microbiology 22 (8) (2020)
Smruthi Karthikeyan, Luis M Rodriguez-R, Patrick Heritier-Robbins, Minjae Kim, Will A Overholt, John C Gaby, Janet K Hatt, Jim C Spain, Ramon Rosselló-Móra, Markus Huettel, Joel E Kostka, Konstantinos T Konstantinidis
"Candidatus Macondimonas diazotrophica", a novel gammaproteobacterial genus dominating crude-oil-contaminated coastal sediments. The ISME journal 13 (8) (2019)
A S Gargis, H P McLaughlin, A B Conley, C Lascols, P A Michel, J E Gee, C K Marston, C B Kolton, Luis M Rodriguez-R, A R Hoffmaster, L M Weigel, David Sue
Analysis of Whole-Genome Sequences for the Prediction of Penicillin Resistance and β-Lactamase Activity in Bacillus anthracis. mSystems 3 (6) (2018)
Luis M Rodriguez-R, Juan C Castro, Nikos C Kyrpides, James R Cole, James M Tiedje, Konstantinos T Konstantinidis
How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity? Applied and environmental microbiology 84 (6) (2018)
Chirag Jain, Luis M Rodriguez-R, Adam M Phillippy, Konstantinos T Konstantinidis, Srinivas Aluru
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries. Nature communications 9 (1) (2018)
Alexandra Meziti, Despina Tsementzi, Luis M Rodriguez-R, Janet K Hatt, Hera Karayanni, Konstantinos Ar Kormas, Konstantinos T Konstantinidis
Quantifying the changes in genetic diversity within sequence-discrete bacterial populations across a spatial and temporal riverine gradient. The ISME journal 13 (3) (2018)
Angela Peña-Gonzalez, Luis M Rodriguez-R, Chung K Marston, Jay E Gee, Christopher A Gulvik, Cari B Kolton, Elke Saile, Michael Frace, Alex R Hoffmaster, Konstantinos T Konstantinidis
Genomic Characterization and Copy Number Variation of Bacillus anthracis Plasmids pXO1 and pXO2 in a Historical Collection of 412 Strains. mSystems 3 (4) (2018)
Luis M Rodriguez-R, Santosh Gunturu, James M Tiedje, James R Cole, Konstantinos T Konstantinidis
Nonpareil 3: Fast Estimation of Metagenomic Coverage and Sequence Diversity. mSystems 3 (3) (2018)

Luis M Rodriguez-R.css-eqlu8i{font-size:small;padding-left:4px;} (L M Rodriguez-R)

Publication Activity (10 Years)

Top Topics

Top Venues

Luis M Rodriguez-R (L M Rodriguez-R)