Konstantinos T Konstantinidis (Kostas T Konstantinidis, K T Konstantinidis, Konstantinos Konstantinidis)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 44

Top Topics

Antimicrobial Resistance

Top Venues

Nature communications

The ISME journal

This page only lists publications with an associated author ORCID identifier.

Publications

Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R, Ana Sofia Ramírez, Stephanus N Venter, Jairo Rocha-Cárdenas, Mercè Llabrés, Rudolf I Amann, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Towards estimating the number of strains that make up a natural bacterial population. Nature communications 15 (1) (2024)
William B Whitman, Maria Chuvochina, Brian P Hedlund, Konstantinos T Konstantinidis, Marike Palmer, Luis M Rodriguez-R, Iain C Sutcliffe, Feng-Ping Wang
Why and how to use the SeqCode. mLife 3 (1) (2024)
J L Rolando, Max Kolton, Tianze Song, Y Liu, P Pinamang, R Conrad, J T Morris, Konstantinos T Konstantinidis, Joel E Kostka
Sulfur oxidation and reduction are coupled to nitrogen fixation in the roots of the salt marsh foundation plant Spartina alterniflora. Nature communications 15 (1) (2024)
C Royer, N V Patin, K J Jesser, A Peña-Gonzalez, J K Hatt, Gabriel Trueba, K Levy, Konstantinos T Konstantinidis
Comparison of metagenomic and traditional methods for diagnosis of E. coli enteric infections. mBio (2024)
Guang He, Gao Chen, Yongchao Xie, Cynthia M Swift, Diana Ramirez, Gyuhyon Cha, Konstantinos T Konstantinidis, Mark Radosevich, Frank E Löffler
Sustained bacterial N 2 O reduction at acidic pH. Nature communications 15 (1) (2024)
Guang He, Gao Chen, Yongchao Xie, Cynthia M Swift, Diana Ramirez, Gyuhyon Cha, Konstantinos T Konstantinidis, Mark Radosevich, Frank E Löffler
Sustained bacterial N 2 O reduction at acidic pH. Nature communications 15 (1) (2024)
C Royer, N V Patin, K J Jesser, A Peña-Gonzalez, J K Hatt, Gabriel Trueba, K Levy, Konstantinos T Konstantinidis
Comparison of metagenomic and traditional methods for diagnosis of E. coli enteric infections. mBio 15 (4) (2024)
Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R, Ana Sofia Ramírez, Stephanus N Venter, Jairo Rocha-Cárdenas, Mercè Llabrés, Rudolf I Amann, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Towards estimating the number of strains that make up a natural bacterial population. Nature communications 15 (1) (2024)
Zi-Teng Liu, Rui-Ao Ma, Dong Zhu, Konstantinos T Konstantinidis, Yong-Guan Zhu, Si-Yu Zhang
Organic fertilization co-selects genetically linked antibiotic and metal(loid) resistance genes in global soil microbiome. Nature communications 15 (1) (2024)
C Royer, N V Patin, K J Jesser, A Peña-Gonzalez, J K Hatt, Gabriel Trueba, K Levy, Konstantinos T Konstantinidis
Comparison of metagenomic and traditional methods for diagnosis of E. coli enteric infections. mBio 15 (4) (2024)
C Royer, N V Patin, K J Jesser, A Peña-Gonzalez, J K Hatt, Gabriel Trueba, K Levy, Konstantinos T Konstantinidis
Comparison of metagenomic and traditional methods for diagnosis of E. coli enteric infections. mBio 15 (4) (2024)
Borja Aldeguer-Riquelme, Roth E Conrad, Josefa Antón, Ramon Rossello-Mora, Konstantinos T Konstantinidis
A natural ANI gap that can define intra-species units of bacteriophages and other viruses. mBio 15 (8) (2024)
C Royer, N V Patin, K J Jesser, A Peña-Gonzalez, J K Hatt, Gabriel Trueba, K Levy, Konstantinos T Konstantinidis
Comparison of metagenomic and traditional methods for diagnosis of E. coli enteric infections. mBio 15 (4) (2024)
Zi-Teng Liu, Rui-Ao Ma, Dong Zhu, Konstantinos T Konstantinidis, Yong-Guan Zhu, Si-Yu Zhang
Organic fertilization co-selects genetically linked antibiotic and metal(loid) resistance genes in global soil microbiome. Nature communications 15 (1) (2024)
William B Whitman, Maria Chuvochina, Brian P Hedlund, Konstantinos T Konstantinidis, Marike Palmer, Luis M Rodriguez-R, Iain C Sutcliffe, Feng-Ping Wang
Why and how to use the SeqCode. mLife 3 (1) (2024)
J L Rolando, Max Kolton, Tianze Song, Y Liu, P Pinamang, R Conrad, J T Morris, Konstantinos T Konstantinidis, Joel E Kostka
Sulfur oxidation and reduction are coupled to nitrogen fixation in the roots of the salt marsh foundation plant Spartina alterniflora. Nature communications 15 (1) (2024)
Guang He, Gao Chen, Yongchao Xie, Cynthia M Swift, Diana Ramirez, Gyuhyon Cha, Konstantinos T Konstantinidis, Mark Radosevich, Frank E Löffler
Sustained bacterial N 2 O reduction at acidic pH. Nature communications 15 (1) (2024)
Borja Aldeguer-Riquelme, Roth E Conrad, Josefa Antón, Ramon Rossello-Mora, Konstantinos T Konstantinidis
A natural ANI gap that can define intra-species units of bacteriophages and other viruses. mBio 15 (8) (2024)
Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R, Ana Sofia Ramírez, Stephanus N Venter, Jairo Rocha-Cárdenas, Mercè Llabrés, Rudolf I Amann, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Towards estimating the number of strains that make up a natural bacterial population. Nature communications 15 (1) (2024)
Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R, Ana Sofia Ramírez, Stephanus N Venter, Jairo Rocha-Cárdenas, Mercè Llabrés, Rudolf I Amann, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Towards estimating the number of strains that make up a natural bacterial population. Nature communications 15 (1) (2024)
Borja Aldeguer-Riquelme, Roth E Conrad, Josefa Antón, Ramon Rossello-Mora, Konstantinos T Konstantinidis
A natural ANI gap that can define intra-species units of bacteriophages and other viruses. mBio 15 (8) (2024)
Borja Aldeguer-Riquelme, Roth E Conrad, Josefa Antón, Ramon Rossello-Mora, Konstantinos T Konstantinidis
A natural ANI gap that can define intra-species units of bacteriophages and other viruses. mBio (2024)
Georgios A Pavlopoulos, Fotis A Baltoumas, Sirui Liu, Oguz Selvitopi, Antonio Pedro Camargo, Stephen Nayfach, Ariful Azad, Simon Roux, Lee Call, Natalia N Ivanova, I Min Chen, A David Páez-Espino, Evangelos Karatzas, null null, Ioannis Iliopoulos, Konstantinos T Konstantinidis, James M Tiedje, Jennifer Pett-Ridge, Julien S Baker, Axel Visel, Christos A Ouzounis, Sergey Ovchinnikov, Aydın Buluç, Nikos C Kyrpides
Unraveling the functional dark matter through global metagenomics. Nature (2023)
Luis M Rodriguez-R, Roth E Conrad, Tomeu Viver, Dorian J Feistel, Blake G Lindner, Stephanus N Venter, Luis H Orellana, Rudolf Amann, Ramon Rossello-Mora, Konstantinos T Konstantinidis
An ANI gap within bacterial species that advances the definitions of intra-species units. mBio (2023)
Konstantinos T Konstantinidis
Sequence-discrete species for prokaryotes and other microbes: A historical perspective and pending issues. mLife 2 (4) (2023)
Michael H Woodworth, Roth E Conrad, Marina Haldopoulos, Stephanie Marie Pouch, Ahmed Babiker, Aneesh K Mehta, Kaitlin L Sitchenko, Charlotte H Wang, Amanda Strudwick, Jessica M Ingersoll, Cécile Philippe, Sarah Lohsen, Kumru Kocaman, Blake G Lindner, Janet K Hatt, Rheinallt M Jones, Candace Miller, Andrew S Neish, Rachel Friedman-Moraco, Geeta M Karadkhele, Ken H Liu, Dean P Jones, Cyra Christina Mehta, Thomas R Ziegler, David S Weiss, Christian P Larsen, Konstantinos T Konstantinidis, Colleen S Kraft
Fecal microbiota transplantation promotes reduction of antimicrobial resistance by strain replacement. Science translational medicine 15 (720) (2023)
Konstantinos T Konstantinidis
Sequence-discrete species for prokaryotes and other microbes: A historical perspective and pending issues. mLife 2 (4) (2023)
Brian P Hedlund, Maria Chuvochina, Philip Hugenholtz, Konstantinos T Konstantinidis, Alison E Murray, Marike Palmer, Donovan H Parks, Alexander J Probst, Anna-Louise Reysenbach, Luis M Rodriguez-R, Ramon Rosselló-Móra, Iain C Sutcliffe, Stephanus N Venter, William B Whitman
SeqCode: a nomenclatural code for prokaryotes described from sequence data. Nature microbiology 7 (10) (2022)
Minjae Kim, Luis M Rodriguez-R, Janet K Hatt, Osman Kayali, Rassul Nalá, Anne L Dunlop, Patricia A Brennan, Elizabeth Corwin, Alicia K Smith, Joe Brown, Konstantinos T Konstantinidis
Higher pathogen load in children from Mozambique vs. USA revealed by comparative fecal microbiome profiling. ISME communications 2 (1) (2022)
Jessica L Gronniger, Zhao Wang, Genevieve R Brandt, Christopher S Ward, Despina Tsementzi, Han Mu, Junyao Gu, Zackary I Johnson, Konstantinos T Konstantinidis, Dana E Hunt
Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables. Environmental microbiology 24 (9) (2022)
Minjae Kim, Yvonne Kienast, Janet K Hatt, Amy E Kirby, Konstantinos T Konstantinidis
Metagenomics indicate that public health risk may be higher from flooding following dry versus rainy periods. Environmental microbiology reports 14 (2) (2022)
Kevin J Zhu, Brittany Suttner, Jackie Knee, Drew Capone, Christine L Moe, Christine E Stauber, Konstantinos T Konstantinidis, Thomas E Wallach, Amy J Pickering, Joe Brown
Elevated Fecal Mitochondrial DNA from Symptomatic Norovirus Infections Suggests Potential Health Relevance of Human Mitochondrial DNA in Fecal Source Tracking. Environmental science & technology letters 9 (6) (2022)
Roth E Conrad, Tomeu Viver, Juan F Gago, Janet K Hatt, Stephanus N Venter, Ramon Rosselló-Móra, Konstantinos T Konstantinidis
Toward quantifying the adaptive role of bacterial pangenomes during environmental perturbations. The ISME journal (2021)
Camila L Madeira, Osmar Menezes, Doyoung Park, Kalyani V Jog, Janet K Hatt, Savia Gavazza, Mark James Krzmarzick, Reyes Sierra-Alvarez, Jim C Spain, Konstantinos T Konstantinidis, Jim A Field
Bacteria Make a Living Breathing the Nitroheterocyclic Insensitive Munitions Compound 3-Nitro-1,2,4-triazol-5-one (NTO). Environmental science & technology 55 (9) (2021)
Smruthi Karthikeyan, Janet K Hatt, Minjae Kim, Jim C Spain, Markus Huettel, Joel E Kostka, Konstantinos T Konstantinidis
A novel, divergent alkane monooxygenase (alkB) clade involved in crude oil biodegradation. Environmental microbiology reports 13 (6) (2021)
Patrick Heritier-Robbins, Smruthi Karthikeyan, Janet K Hatt, Minjae Kim, Markus Huettel, Joel E Kostka, Konstantinos T Konstantinidis, Luis M Rodriguez-R
Beach sand oil spills select for generalist microbial populations. The ISME journal 15 (11) (2021)
Luis M Rodriguez-R, Chirag Jain, Roth E Conrad, Srinivas Aluru, Konstantinos T Konstantinidis
Reply to: "Re-evaluating the evidence for a universal genetic boundary among microbial species". Nature communications 12 (1) (2021)
Brittany Suttner, Minjae Kim, Eric R Johnston, Luis H Orellana, Carlos A Ruiz-Perez, Luis M Rodriguez-R, Janet K Hatt, Joe Brown, Jorge W Santo Domingo, Konstantinos T Konstantinidis
Transcriptomic and rRNA:rDNA Signatures of Environmental versus Enteric Enterococcus faecalis Isolates under Oligotrophic Freshwater Conditions. Microbiology spectrum 9 (2) (2021)
Si-Yu Zhang, Xiao Xiao, Song-Can Chen, Yong-Guan Zhu, Guo-Xin Sun, Konstantinos T Konstantinidis
High Arsenic Levels Increase Activity Rather than Diversity or Abundance of Arsenic Metabolism Genes in Paddy Soils. Applied and environmental microbiology 87 (20) (2021)
Konstantinos T Konstantinidis, Ramon Rosselló-Móra, Rudolf Amann
Advantages outweigh concerns about using genome sequence as type material for prokaryotic taxonomy. Environmental microbiology 22 (3) (2020)
Tomeu Viver, Roth E Conrad, Luis H Orellana, Mercedes Urdiain, José E González-Pastor, Janet K Hatt, Rudolf I Amann, Josefa Antón, Konstantinos T Konstantinidis, Ramon Rosselló-Móra
Distinct ecotypes within a natural haloarchaeal population enable adaptation to changing environmental conditions without causing population sweeps. The ISME journal 15 (4) (2020)
Smruthi Karthikeyan, Minjae Kim, Patrick Heritier-Robbins, Janet K Hatt, Jim C Spain, Will A Overholt, Markus Huettel, Joel E Kostka, Konstantinos T Konstantinidis
Integrated Omics Elucidate the Mechanisms Driving the Rapid Biodegradation of Deepwater Horizon Oil in Intertidal Sediments Undergoing Oxic-Anoxic Cycles. Environmental science & technology 54 (16) (2020)
Luis M Rodriguez-R, Despina Tsementzi, Chengwei Luo, Konstantinos T Konstantinidis
Iterative subtractive binning of freshwater chronoseries metagenomes identifies over 400 novel species and their ecologic preferences. Environmental microbiology 22 (8) (2020)
Anthony D Bertagnolli, Konstantinos T Konstantinidis, Frank J Stewart
Non-denitrifier nitrous oxide reductases dominate marine biomes. Environmental microbiology reports 12 (6) (2020)