Marc Zapatka (M Zapatka)

Scopus Author ID Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 26

Top Venues

Nature communications

Blood

Bioinformatics (Oxford, England)

Leukemia

This page only lists publications with an associated author ORCID identifier.

Publications

Bjarne Daenekas, Eilís Pérez, Fabio Boniolo, Sabina Stefan, Salvatore Benfatto, Martin Sill, Dominik Sturm, David T W Jones, David Capper, Marc Zapatka, Volker Hovestadt
Conumee 2.0: enhanced copy-number variation analysis from DNA methylation arrays for humans and mice. Bioinformatics (Oxford, England) 40 (2) (2024)
Bjarne Daenekas, Eilís Pérez, Fabio Boniolo, Sabina Stefan, Salvatore Benfatto, Martin Sill, Dominik Sturm, David T W Jones, David Capper, Marc Zapatka, Volker Hovestadt
Conumee 2.0: enhanced copy-number variation analysis from DNA methylation arrays for humans and mice. Bioinformatics (Oxford, England) 40 (2) (2024)
Philipp M Roessner, Isabelle Seufert, Vicente Chapaprieta, Ruparoshni Jayabalan, Hannah Briesch, Ramon Massoni-Badosa, Pavle Boskovic, Julian Beckendorff, Tobias Roider, Lavinia Arseni, Mariana Coelho, Supriya Chakraborty, Alicia Vaca, Mariela Sivina, Markus Muckenhuber, Sonia Rodriguez-Rodriguez, Alice Bonato, Sophie A Herbst, Marc Zapatka, Clare Sun, Helene Kretzmer, Thomas Naake, Peter-Martin Bruch, Felix Czernilofsky, Elisa Ten Hacken, Martin Schneider, Dominic Helm, Deyan Yordanov Yosifov, Joseph Kauer, Alexey V Danilov, Moritz Bewarder, Kristina Heyne, Christof Schneider, Stephan Stilgenbauer, Adrian Wiestner, Jan-Philipp Mallm, Jan A Burger, Dimitar G Efremov, Peter Lichter, Sascha Dietrich, José Ignacio Martín-Subero, Karsten Rippe, Martina Seiffert
T-bet suppresses proliferation of malignant B cells in chronic lymphocytic leukemia. Blood (2024)
Philipp M Roessner, Isabelle Seufert, Vicente Chapaprieta, Ruparoshni Jayabalan, Hannah Briesch, Ramon Massoni-Badosa, Pavle Boskovic, Julian Benckendorff, Tobias Roider, Lavinia Arseni, Mariana Coelho, Supriya Chakraborty, Alicia M Vaca, Mariela Sivina, Markus Muckenhuber, Sonia Rodriguez-Rodriguez, Alice Bonato, Sophie A Herbst, Marc Zapatka, Clare Sun, Helene Kretzmer, Thomas Naake, Peter-Martin Bruch, Felix Czernilofsky, Elisa Ten Hacken, Martin Schneider, Dominic Helm, Deyan Yordanov Yosifov, Joseph Kauer, Alexey V Danilov, Moritz Bewarder, Kristina Heyne, Christof Schneider, Stephan Stilgenbauer, Adrian Wiestner, Jan-Philipp Mallm, Jan A Burger, Dimitar G Efremov, Peter Lichter, Sascha Dietrich, José Ignacio Martin-Subero, Karsten Rippe, Martina Seiffert
T-bet suppresses proliferation of malignant B cells in chronic lymphocytic leukemia. Blood 144 (5) (2024)
Philipp M Roessner, Isabelle Seufert, Vicente Chapaprieta, Ruparoshni Jayabalan, Hannah Briesch, Ramon Massoni-Badosa, Pavle Boskovic, Julian Benckendorff, Tobias Roider, Lavinia Arseni, Mariana Coelho, Supriya Chakraborty, Alicia M Vaca, Mariela Sivina, Markus Muckenhuber, Sonia Rodriguez-Rodriguez, Alice Bonato, Sophie A Herbst, Marc Zapatka, Clare Sun, Helene Kretzmer, Thomas Naake, Peter-Martin Bruch, Felix Czernilofsky, Elisa Ten Hacken, Martin Schneider, Dominic Helm, Deyan Yordanov Yosifov, Joseph Kauer, Alexey V Danilov, Moritz Bewarder, Kristina Heyne, Christof Schneider, Stephan Stilgenbauer, Adrian Wiestner, Jan-Philipp Mallm, Jan A Burger, Dimitar G Efremov, Peter Lichter, Sascha Dietrich, José Ignacio Martin-Subero, Karsten Rippe, Martina Seiffert
T-bet suppresses proliferation of malignant B cells in chronic lymphocytic leukemia. Blood 144 (5) (2024)
Bjarne Daenekas, Eilís Pérez, Fabio Boniolo, Sabina Stefan, Salvatore Benfatto, Martin Sill, Dominik Sturm, David T W Jones, David Capper, Marc Zapatka, Volker Hovestadt
Conumee 2.0: enhanced copy-number variation analysis from DNA methylation arrays for humans and mice. Bioinformatics (Oxford, England) 40 (2) (2024)
Bjarne Daenekas, Eilís Pérez, Fabio Boniolo, Sabina Stefan, Salvatore Benfatto, Martin Sill, Dominik Sturm, David T W Jones, David Capper, Marc Zapatka, Volker Hovestadt
Conumee 2.0: enhanced copy-number variation analysis from DNA methylation arrays for humans and mice. Bioinformatics (Oxford, England) 40 (2) (2024)
Marc Zapatka, Ivan Borozan, Daniel S Brewer, Murat Iskar, Adam Grundhoff, Malik Alawi, Nikita Desai, Holger Sültmann, Holger Moch, null null, Colin S Cooper, Roland Eils, Vincent Ferretti, Peter Lichter, null null
Author Correction: The landscape of viral associations in human cancers. Nature genetics (2023)
Mohammad Jaber, Ahmed Radwan, Netanel Loyfer, Mufeed Abdeen, Shulamit Sebban, Areej Khatib, Hazar Yassen, Thorsten Kolb, Marc Zapatka, Kirill Makedonski, Aurelie Ernst, Tommy Kaplan, Yosef Buganim
Comparative parallel multi-omics analysis during the induction of pluripotent and trophectoderm states. Nature communications 13 (1) (2022)
Eugen Tausch, Viktor Ljungström, Andreas Agathangelidis, Marc Zapatka, Lydia Scarfò, Billy Michael Chelliah Jebaraj, Deyan Yordanov Yosifov, Annika Müller, Veerendra Munugalavadla, Jeremiah D Degenhardt, Paolo Ghia, Richard Rosenquist, Stephan Stilgenbauer
Secondary resistance to idelalisib is characterized by upregulation of IGF1R rather than by MAPK/ERK pathway mutations. Blood 139 (22) (2022)
Sophie A Herbst, Mattias Vesterlund, Alexander J Helmboldt, Rozbeh Jafari, Ioannis Siavelis, Matthias Stahl, Eva C Schitter, Nora Liebers, Berit J Brinkmann, Felix Czernilofsky, Tobias Roider, Peter-Martin Bruch, Murat Iskar, Adam Kittai, Ying Huang, JunYan Lu, Sarah Richter, Georgios Mermelekas, Husen Muhammad Umer, Mareike Knoll, Carolin Kolb, Angela Lenze, Xiaofang Cao, Cecilia Österholm, Linus Wahnschaffe, Carmen Herling, Sebastian Scheinost, Matthias Ganzinger, Larry Mansouri, Katharina Kriegsmann, Mark Kriegsmann, Simon Anders, Marc Zapatka, Giovanni Del Poeta, Antonella Zucchetto, Riccardo Bomben, Valter Gattei, Peter Dreger, Jennifer A Woyach, Marco Herling, Carsten Muller-Tidow, Richard Rosenquist, Stephan Stilgenbauer, Thorsten Zenz, Wolfgang Huber, Eugen Tausch, Janne Lehtiö, Sascha Dietrich
Proteogenomics refines the molecular classification of chronic lymphocytic leukemia. Nature communications 13 (1) (2022)
Paurnima Patil, Umut H Toprak, Julian Seufert, Till Braun, Stephan H Bernhart, Laura Wiehle, Annika Müller, Matthias Schlesner, Marco Herling, Peter Lichter, Stephan Stilgenbauer, Reiner Siebert, Marc Zapatka
Exploration of whole genome and transcriptome sequencing data lacks evidence for oncogenic viral elements to drive the pathogenesis of T-cell prolymphocytic leukemia. Leukemia & lymphoma (2022)
John K L Wong, Christian Aichmüller, Markus Schulze, Mario Hlevnjak, Shaymaa Elgaafary, Peter Lichter, Marc Zapatka
Association of mutation signature effectuating processes with mutation hotspots in driver genes and non-coding regions. Nature communications 13 (1) (2022)
Natalia Voronina, Christian Aichmüller, Thorsten Kolb, Andrey Korshunov, Marina Ryzhova, Jill S Barnholtz-Sloan, Gino Cioffi, Martin Sill, Andreas von Deimling, Stefan M Pfister, Jan Gronych, David T W Jones, Jonas Frisén, Marc Zapatka, Aurélie Ernst
The age of adult pilocytic astrocytoma cells. Oncogene 40 (16) (2021)
Daniel Hübschmann, Kortine Kleinheinz, Rabea Wagener, Stephan H Bernhart, Cristina López, Umut H Toprak, Stephanie Sungalee, Naveed Ishaque, Helene Kretzmer, Markus Kreuz, Sebastian M Waszak, Nagarajan Paramasivam, Ole Ammerpohl, Sietse M Aukema, Renée Beekman, Anke K Bergmann, Matthias Bieg, Hans Binder, Arndt Borkhardt, Christoph Borst, Benedikt Brors, Philipp Bruns, Enrique Carrillo de Santa Pau, Alexander Claviez, Gero Doose, Andrea Haake, Dennis Karsch, Siegfried Haas, Martin-Leo Hansmann, Jessica I Hoell, Volker Hovestadt, Bingding Huang, Michael Hummel, Christina Jäger-Schmidt, Jules N A Kerssemakers, Jan O Korbel, Dieter Kube, Chris Lawerenz, Dido Lenze, Joost H A Martens, German Ott, Bernhard Radlwimmer, Eva Reisinger, Julia Richter, Daniel Rico, Philip Rosenstiel, Andreas Rosenwald, Markus Schillhabel, Stephan Stilgenbauer, Peter F Stadler, José Ignacio Martin-Subero, Monika Szczepanowski, Gregor Warsow, Marc A Weniger, Marc Zapatka, Alfonso Valencia, Hendrik G Stunnenberg, Peter Lichter, Peter Möller, Markus Loeffler, Roland Eils, Wolfram Klapper, Steve Hoffmann, Lorenz Trümper, null null, null null, null null, Ralf Küppers, Matthias Schlesner, Reiner Siebert
Mutational mechanisms shaping the coding and noncoding genome of germinal center derived B-cell lymphomas. Leukemia 35 (7) (2021)
Selcen Öztürk, Yashna Paul, Saira Afzal, Irene Gil-Farina, Anna Jauch, Peter-Martin Bruch, Verena Kalter, Bola Hanna, Lavinia Arseni, Philipp M Roessner, Manfred Schmidt, Stephan Stilgenbauer, Sascha Dietrich, Peter Lichter, Marc Zapatka, Martina Seiffert
Longitudinal analyses of CLL in mice identify leukemia-related clonal changes including a Myc gain predicting poor outcome in patients. Leukemia (2021)
Marc Zapatka, Ivan Borozan, Daniel S Brewer, Murat Iskar, Adam Grundhoff, Malik Alawi, Nikita Desai, Holger Sültmann, Holger Moch, null null, Colin S Cooper, Roland Eils, Vincent Ferretti, Peter Lichter, null null
The landscape of viral associations in human cancers. Nature genetics 52 (3) (2020)
Natalia Voronina, John K L Wong, Daniel Hübschmann, Mario Hlevnjak, Sebastian Uhrig, Christoph E Heilig, Peter Horak, Simon Kreutzfeldt, Andreas Mock, Albrecht Stenzinger, Barbara Hutter, Martina Fröhlich, Benedikt Brors, Arne Jahn, Barbara Klink, Laura Gieldon, Lina Sieverling, Lars Feuerbach, Priya Chudasama, Katja Beck, Matthias Kroiss, Christoph Heining, Lino Möhrmann, Andrea Fischer, Evelin Schröck, Hanno Glimm, Marc Zapatka, Peter Lichter, Stefan Fröhling, Aurélie Ernst
The landscape of chromothripsis across adult cancer types. Nature communications 11 (1) (2020)
Michiel Bolkestein, John K L Wong, Verena Thewes, Verena Körber, Mario Hlevnjak, Shaymaa Elgaafary, Markus Schulze, Felix K F Kommoss, Hans-Peter Sinn, Tobias Anzeneder, Steffen Hirsch, Frauke Devens, Petra Schröter, Thomas Höfer, Andreas Schneeweiß, Peter Lichter, Marc Zapatka, Aurélie Ernst
Chromothripsis in Human Breast Cancer. Cancer research 80 (22) (2020)
Katrin S Kurz, Kortine Kleinheinz, Sietse M Aukema, Marius Rohde, Stephan H Bernhart, Daniel Hübschmann, Rabea Wagener, Umut H Toprak, Francesco Raimondi, Markus Kreuz, Sebastian M Waszak, Zhiqin Huang, Lina Sieverling, Nagarajan Paramasivam, Julian Seufert, Stephanie Sungalee, Robert B Russell, Julia Bausinger, Helene Kretzmer, Ole Ammerpohl, Anke K Bergmann, Hans Binder, Arndt Borkhardt, Benedikt Brors, Alexander Claviez, Gero Doose, Lars Feuerbach, Andrea Haake, Martin-Leo Hansmann, Jessica Hoell, Michael Hummel, Jan O Korbel, Chris Lawerenz, Dido Lenze, Bernhard Radlwimmer, Julia Richter, Philip Rosenstiel, Andreas Rosenwald, Markus B Schilhabel, Harald Stein, Stephan Stilgenbauer, Peter F Stadler, Monika Szczepanowski, Marc A Weniger, Marc Zapatka, Roland Eils, Peter Lichter, Markus Loeffler, Peter Möller, Lorenz Trümper, Wolfram Klapper, null null, Steve Hoffmann, Ralf Küppers, Birgit Burkhardt, Matthias Schlesner, Reiner Siebert
Genomic and transcriptomic changes complement each other in the pathogenesis of sporadic Burkitt lymphoma. Nature communications 10 (1) (2019)
Catherine Lee, Vasilisa A Rudneva, Serap Erkek, Marc Zapatka, Lianne Q Chau, Silvia K Tacheva-Grigorova, Alexandra Garancher, Jessica M Rusert, Ozlem Aksoy, Robin Lea, Helai P Mohammad, Jianxun Wang, William A Weiss, H Leighton Grimes, Stefan M Pfister, Paul A Northcott, Robert J Wechsler-Reya
Lsd1 as a therapeutic target in Gfi1-activated medulloblastoma. Nature communications 10 (1) (2019)
Jan-Philipp Mallm, Murat Iskar, Naveed Ishaque, Lara C Klett, Sabrina J Kugler, Jose M Muiño, Vladimir B Teif, Alexandra M Poos, Sebastian Großmann, Fabian Erdel, Daniele Tavernari, Sandra D Koser, Sabrina Schumacher, Benedikt Brors, Rainer König, Daniel Remondini, Martin Vingron, Stephan Stilgenbauer, Peter Lichter, Marc Zapatka, Daniel Mertens, Karsten Rippe
Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks. Molecular systems biology 15 (5) (2019)
Priya Chudasama, Sadaf S Mughal, Mathijs A Sanders, Daniel Hübschmann, Inn Chung, Katharina I Deeg, Siao-Han Wong, Sophie Rabe, Mario Hlevnjak, Marc Zapatka, Aurélie Ernst, Kortine Kleinheinz, Matthias Schlesner, Lina Sieverling, Barbara Klink, Evelin Schröck, Remco M Hoogenboezem, Bernd Kasper, Christoph E Heilig, Gerlinde Egerer, Stephan Wolf, Christof von Kalle, Roland Eils, Albrecht Stenzinger, Wilko Weichert, Hanno Glimm, Stefan Gröschel, Hans-Georg Kopp, Georg Omlor, Burkhard Lehner, Sebastian Bauer, Simon Schimmack, Alexis Ulrich, Gunhild Mechtersheimer, Karsten Rippe, Benedikt Brors, Barbara Hutter, Marcus Renner, Peter Hohenberger, Claudia Scholl, Stefan Fröhling
Integrative genomic and transcriptomic analysis of leiomyosarcoma. Nature communications 9 (1) (2018)
Marc Zuckermann, Mario Hlevnjak, Haniyeh Yazdanparast, Marc Zapatka, David T W Jones, Peter Lichter, Jan Gronych
A novel cloning strategy for one-step assembly of multiplex CRISPR vectors. Scientific reports 8 (1) (2018)
M Ratnaparkhe, M Hlevnjak, T Kolb, A Jauch, K K Maass, F Devens, A Rode, V Hovestadt, A Korshunov, A Pastorczak, W Mlynarski, S Sungalee, J Korbel, J Hoell, U Fischer, T Milde, C Kramm, M Nathrath, K Chrzanowska, E Tausch, Masatoshi Takagi, T Taga, S Constantini, J Loeffen, J Meijerink, S Zielen, G Gohring, B Schlegelberger, E Maass, R Siebert, J Kunz, A E Kulozik, B Worst, D T Jones, S M Pfister, Marc Zapatka, P Lichter, A Ernst
Genomic profiling of Acute lymphoblastic leukemia in ataxia telangiectasia patients reveals tight link between ATM mutations and chromothripsis. Leukemia 31 (10) (2017)
V Thewes, R Simon, M Hlevnjak, M Schlotter, P Schroeter, K Schmidt, Y Wu, T Anzeneder, W Wang, P Windisch, M Kirchgäßner, N Melling, N Kneisel, R Büttner, U Deuschle, H P Sinn, A Schneeweiss, S Heck, S Kaulfuss, H Hess-Stumpp, J G Okun, G Sauter, A E Lykkesfeldt, Marc Zapatka, Bernhard Radlwimmer, P Lichter, M Tönjes
The branched-chain amino acid transaminase 1 sustains growth of antiestrogen-resistant and ERα-negative breast cancer. Oncogene 36 (29) (2017)

Marc Zapatka.css-eqlu8i{font-size:small;padding-left:4px;} (M Zapatka)

Publication Activity (10 Years)

Top Topics

Top Venues

Marc Zapatka (M Zapatka)